RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 NBR1Q14596 966 aa25.2■■□□□ 1.62
AP3S1-201ENST00000316788 TERF2IPQ9NYB0 399 aa25.2■■□□□ 1.62
AP3S1-201ENST00000316788 ALKQ9UM73 1620 aa25.19■■□□□ 1.62
AP3S1-201ENST00000316788 ARHGAP23Q9P227 1491 aa25.19■■□□□ 1.62
AP3S1-201ENST00000316788 DEKP35659 375 aaKnown RBP25.19■■□□□ 1.62
AP3S1-201ENST00000316788 CD163L1Q9NR16 1453 aa25.19■■□□□ 1.62
AP3S1-201ENST00000316788 MAPK8IP3Q9UPT6 1336 aa25.19■■□□□ 1.62
AP3S1-201ENST00000316788 SLIT1O75093 1534 aa25.18■■□□□ 1.62
AP3S1-201ENST00000316788 CANXP27824 592 aaKnown RBP25.17■■□□□ 1.62
AP3S1-201ENST00000316788 TXNDC2Q86VQ3 553 aa25.17■■□□□ 1.62
AP3S1-201ENST00000316788 NCKAP5LQ9HCH0 1330 aa25.16■■□□□ 1.62
AP3S1-201ENST00000316788 U2AF1L5P0DN76 240 aaPredicted RBP25.15■■□□□ 1.62
AP3S1-201ENST00000316788 SRPK2P78362 688 aaKnown RBP25.15■■□□□ 1.62
AP3S1-201ENST00000316788 U2AF1Q01081 240 aaKnown RBP eCLIP25.15■■□□□ 1.622e-6■■■■□ 19.7
AP3S1-201ENST00000316788 PMFBP1Q8TBY8 1022 aa25.15■■□□□ 1.62
AP3S1-201ENST00000316788 RRP7AQ9Y3A4 280 aaKnown RBP25.15■■□□□ 1.62
AP3S1-201ENST00000316788 IL16Q14005 1332 aa25.14■■□□□ 1.61
AP3S1-201ENST00000316788 IGHDP01880 384 aa25.13■■□□□ 1.61
AP3S1-201ENST00000316788 PNPLA6Q8IY17 1366 aa25.13■■□□□ 1.61
AP3S1-201ENST00000316788 CDC42BPGQ6DT37 1551 aa25.12■■□□□ 1.61
AP3S1-201ENST00000316788 NEUROD2Q15784 382 aa25.12■■□□□ 1.61
AP3S1-201ENST00000316788 PANK1Q8TE04 598 aa25.12■■□□□ 1.61
AP3S1-201ENST00000316788 PRAM1Q96QH2 718 aa25.12■■□□□ 1.61
AP3S1-201ENST00000316788 PLEKHF1Q96S99 279 aa25.12■■□□□ 1.61
AP3S1-201ENST00000316788 BCL11AQ9H165 835 aa25.12■■□□□ 1.61
AP3S1-201ENST00000316788 COG6Q9Y2V7 657 aa25.12■■□□□ 1.61
AP3S1-201ENST00000316788 ANKLE2Q86XL3 938 aa25.11■■□□□ 1.61
AP3S1-201ENST00000316788 EID1Q9Y6B2 187 aa25.11■■□□□ 1.61
AP3S1-201ENST00000316788 VIRMAQ69YN4 1812 aaKnown RBP25.11■■□□□ 1.61
AP3S1-201ENST00000316788 HDGFL2Q7Z4V5 671 aaPredicted RBP25.1■■□□□ 1.61
AP3S1-201ENST00000316788 POGKQ9P215 609 aa25.1■■□□□ 1.61
AP3S1-201ENST00000316788 STK26Q9P289 416 aa25.1■■□□□ 1.61
AP3S1-201ENST00000316788 ATP7BP35670 1465 aa25.1■■□□□ 1.61
AP3S1-201ENST00000316788 FYB1O15117 783 aa25.09■■□□□ 1.61
AP3S1-201ENST00000316788 PNNQ9H307 717 aaKnown RBP25.09■■□□□ 1.61
AP3S1-201ENST00000316788 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.09■■□□□ 1.61
AP3S1-201ENST00000316788 RGS3P49796 1198 aa25.08■■□□□ 1.61
AP3S1-201ENST00000316788 MINK1Q8N4C8 1332 aaPredicted RBP25.06■■□□□ 1.6
AP3S1-201ENST00000316788 SAFB2Q14151 953 aaKnown RBP eCLIP25.06■■□□□ 1.6
AP3S1-201ENST00000316788 FRAT1Q92837 279 aaPredicted RBP25.06■■□□□ 1.6
AP3S1-201ENST00000316788 KIF20BQ96Q89 1820 aa25.06■■□□□ 1.6
AP3S1-201ENST00000316788 STRCQ7RTU9 1775 aa25.05■■□□□ 1.6
AP3S1-201ENST00000316788 TMPOP42166 694 aaKnown RBP25.05■■□□□ 1.6
AP3S1-201ENST00000316788 HDGFP51858 240 aaKnown RBP25.05■■□□□ 1.6
AP3S1-201ENST00000316788 GGNBP2Q9H3C7 697 aa25.05■■□□□ 1.6
AP3S1-201ENST00000316788 SETD1AO15047 1707 aaKnown RBP25.04■■□□□ 1.6
AP3S1-201ENST00000316788 CDK19Q9BWU1 502 aa25.03■■□□□ 1.6
AP3S1-201ENST00000316788 PLEKHG1Q9ULL1 1385 aa25.03■■□□□ 1.6
AP3S1-201ENST00000316788 SLC26A8Q96RN1 970 aa25.03■■□□□ 1.6
AP3S1-201ENST00000316788 ZKSCAN2Q63HK3 967 aa25.02■■□□□ 1.6
AP3S1-201ENST00000316788 NRXN3Q9Y4C0 1643 aa25.02■■□□□ 1.6
AP3S1-201ENST00000316788 RLBP1P12271 317 aa25.01■■□□□ 1.59
AP3S1-201ENST00000316788 MVPQ14764 893 aaKnown RBP25.01■■□□□ 1.59
AP3S1-201ENST00000316788 TRIM35Q9UPQ4 493 aa25.01■■□□□ 1.59
AP3S1-201ENST00000316788 NPHP4O75161 1426 aaPredicted RBP25.01■■□□□ 1.59
AP3S1-201ENST00000316788 DIAPH1O60610 1272 aaKnown RBP25■■□□□ 1.59
AP3S1-201ENST00000316788 RWDD1Q9H446 243 aaPredicted RBP25■■□□□ 1.59
AP3S1-201ENST00000316788 ADAMTS13Q76LX8 1427 aa25■■□□□ 1.59
AP3S1-201ENST00000316788 NEFMP07197 916 aa25■■□□□ 1.59
AP3S1-201ENST00000316788 DAXXQ9UER7 740 aaPredicted RBP25■■□□□ 1.59
AP3S1-201ENST00000316788 LAS1LQ9Y4W2 734 aaKnown RBP24.99■■□□□ 1.59
AP3S1-201ENST00000316788 U2SURPO15042 1029 aaKnown RBP24.98■■□□□ 1.59
AP3S1-201ENST00000316788 PCDHB15Q9Y5E8 787 aa24.98■■□□□ 1.59
AP3S1-201ENST00000316788 FCHSD2O94868 740 aa24.97■■□□□ 1.59
AP3S1-201ENST00000316788 DZIP1LQ8IYY4 767 aaKnown RBP24.97■■□□□ 1.59
AP3S1-201ENST00000316788 CABP1Q9NZU7 370 aa24.95■■□□□ 1.59
AP3S1-201ENST00000316788 SIRT1Q96EB6 747 aa24.95■■□□□ 1.58
AP3S1-201ENST00000316788 PPIP5K1Q6PFW1 1433 aa24.95■■□□□ 1.58
AP3S1-201ENST00000316788 USP19O94966 1318 aa24.94■■□□□ 1.58
AP3S1-201ENST00000316788 CPSF1Q10570 1443 aaKnown RBP24.94■■□□□ 1.58
AP3S1-201ENST00000316788 FAM135BQ49AJ0 1406 aa24.94■■□□□ 1.58
AP3S1-201ENST00000316788 EXOSC9Q06265 439 aaKnown RBP24.94■■□□□ 1.58
AP3S1-201ENST00000316788 METP08581 1390 aa24.93■■□□□ 1.58
AP3S1-201ENST00000316788 EDC4Q6P2E9 1401 aaKnown RBP24.93■■□□□ 1.58
AP3S1-201ENST00000316788 ZNF428Q96B54 188 aa24.93■■□□□ 1.58
AP3S1-201ENST00000316788 BCL2L13Q9BXK5 485 aa24.92■■□□□ 1.58
AP3S1-201ENST00000316788 TNNQ9UQP3 1299 aa24.92■■□□□ 1.58
AP3S1-201ENST00000316788 KNDC1Q76NI1 1749 aa24.92■■□□□ 1.58
AP3S1-201ENST00000316788 LRRC7Q96NW7 1537 aa24.92■■□□□ 1.58
AP3S1-201ENST00000316788 FTSJ3Q8IY81 847 aaKnown RBP24.92■■□□□ 1.58
AP3S1-201ENST00000316788 TECPR2O15040 1411 aa24.91■■□□□ 1.58
AP3S1-201ENST00000316788 ALDH1L2Q3SY69 923 aa24.91■■□□□ 1.58
AP3S1-201ENST00000316788 SMC4Q9NTJ3 1288 aa24.91■■□□□ 1.58
AP3S1-201ENST00000316788 DDX19BQ9UMR2 479 aa24.91■■□□□ 1.58
AP3S1-201ENST00000316788 PDZRN3Q9UPQ7 1066 aa24.91■■□□□ 1.58
AP3S1-201ENST00000316788 KIF16BQ96L93 1317 aa24.91■■□□□ 1.58
AP3S1-201ENST00000316788 RIPK4P57078 832 aa24.9■■□□□ 1.58
AP3S1-201ENST00000316788 HDAC1Q13547 482 aaPredicted RBP24.9■■□□□ 1.58
AP3S1-201ENST00000316788 TSR2Q969E8 191 aaKnown RBP24.9■■□□□ 1.58
AP3S1-201ENST00000316788 AATKQ6ZMQ8 1374 aa24.9■■□□□ 1.58
AP3S1-201ENST00000316788 BRPF1P55201 1214 aaPredicted RBP24.89■■□□□ 1.58
AP3S1-201ENST00000316788 ATF7IPQ6VMQ6 1270 aa24.89■■□□□ 1.57
AP3S1-201ENST00000316788 TBX22Q9Y458 520 aa24.89■■□□□ 1.57
AP3S1-201ENST00000316788 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.57
AP3S1-201ENST00000316788 SSH1Q8WYL5 1049 aa24.88■■□□□ 1.57
AP3S1-201ENST00000316788 RSPH6AQ9H0K4 717 aa24.88■■□□□ 1.57
AP3S1-201ENST00000316788 TRIM27P14373 513 aa24.87■■□□□ 1.57
AP3S1-201ENST00000316788 POLKQ9UBT6 870 aa24.87■■□□□ 1.57
AP3S1-201ENST00000316788 PTPRUQ92729 1446 aa24.87■■□□□ 1.57
AP3S1-201ENST00000316788 IPO8O15397 1037 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms