RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 PRR36Q9H6K5 1346 aa17.51■□□□□ 0.39
ABCD3-201ENST00000315713 FAM83GA6ND36 823 aa17.51■□□□□ 0.39
ABCD3-201ENST00000315713 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
ABCD3-201ENST00000315713 MINK1Q8N4C8 1332 aaPredicted RBP17.5■□□□□ 0.39
ABCD3-201ENST00000315713 A0A0G2JS52 829 aa17.5■□□□□ 0.39
ABCD3-201ENST00000315713 MYT1Q01538 1121 aa17.5■□□□□ 0.39
ABCD3-201ENST00000315713 KRT27Q7Z3Y8 459 aa17.5■□□□□ 0.39
ABCD3-201ENST00000315713 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
ABCD3-201ENST00000315713 EIF3AQ14152 1382 aaKnown RBP17.5■□□□□ 0.39
ABCD3-201ENST00000315713 ONECUT3O60422 494 aaPredicted RBP17.49■□□□□ 0.39
ABCD3-201ENST00000315713 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
ABCD3-201ENST00000315713 TRAK1Q9UPV9 953 aa17.49■□□□□ 0.39
ABCD3-201ENST00000315713 ATP7BP35670 1465 aa17.49■□□□□ 0.39
ABCD3-201ENST00000315713 STAC3Q96MF2 364 aa17.48■□□□□ 0.39
ABCD3-201ENST00000315713 GPRASP1Q5JY77 1395 aa17.48■□□□□ 0.39
ABCD3-201ENST00000315713 FAM98CQ17RN3 349 aaKnown RBP17.47■□□□□ 0.39
ABCD3-201ENST00000315713 BTG4Q9NY30 223 aa17.47■□□□□ 0.39
ABCD3-201ENST00000315713 KIAA1210Q9ULL0 1709 aa17.45■□□□□ 0.38
ABCD3-201ENST00000315713 NRKQ7Z2Y5 1582 aa17.45■□□□□ 0.38
ABCD3-201ENST00000315713 RREB1Q92766 1687 aa17.44■□□□□ 0.38
ABCD3-201ENST00000315713 PSDA5PKW4 1024 aaPredicted RBP17.43■□□□□ 0.38
ABCD3-201ENST00000315713 WASLO00401 505 aaPredicted RBP17.43■□□□□ 0.38
ABCD3-201ENST00000315713 SPATA31A5Q5VU36 1347 aa17.43■□□□□ 0.38
ABCD3-201ENST00000315713 SPATA31A7Q8IWB4 1347 aa17.43■□□□□ 0.38
ABCD3-201ENST00000315713 NUP188Q5SRE5 1749 aa17.42■□□□□ 0.38
ABCD3-201ENST00000315713 BAG6P46379 1132 aa17.42■□□□□ 0.38
ABCD3-201ENST00000315713 FAM182BQ5T319 152 aa17.42■□□□□ 0.38
ABCD3-201ENST00000315713 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
ABCD3-201ENST00000315713 NGDNQ8NEJ9 315 aaKnown RBP17.41■□□□□ 0.38
ABCD3-201ENST00000315713 LMO7Q8WWI1 1683 aa17.41■□□□□ 0.38
ABCD3-201ENST00000315713 DISP2A7MBM2 1401 aa17.4■□□□□ 0.38
ABCD3-201ENST00000315713 L3MBTL2Q969R5 705 aa17.4■□□□□ 0.38
ABCD3-201ENST00000315713 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
ABCD3-201ENST00000315713 KIAA0232Q92628 1395 aa17.4■□□□□ 0.38
ABCD3-201ENST00000315713 QRICH2Q9H0J4 1663 aa17.39■□□□□ 0.37
ABCD3-201ENST00000315713 WNK3Q9BYP7 1800 aa17.38■□□□□ 0.37
ABCD3-201ENST00000315713 TONSLQ96HA7 1378 aa17.38■□□□□ 0.37
ABCD3-201ENST00000315713 EN1Q05925 392 aaPredicted RBP17.37■□□□□ 0.37
ABCD3-201ENST00000315713 PARP4Q9UKK3 1724 aaKnown RBP17.36■□□□□ 0.37
ABCD3-201ENST00000315713 CHRNA2Q15822 529 aa17.36■□□□□ 0.37
ABCD3-201ENST00000315713 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
ABCD3-201ENST00000315713 NUDT16Q96DE0 195 aaKnown RBP17.35■□□□□ 0.37
ABCD3-201ENST00000315713 SPATA31A1Q5TZJ5 1347 aa17.35■□□□□ 0.37
ABCD3-201ENST00000315713 POLR3AO14802 1390 aaPredicted RBP17.34■□□□□ 0.37
ABCD3-201ENST00000315713 NUTM2GQ5VZR2 741 aa17.34■□□□□ 0.37
ABCD3-201ENST00000315713 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
ABCD3-201ENST00000315713 CAMTA1Q9Y6Y1 1673 aa17.34■□□□□ 0.37
ABCD3-201ENST00000315713 STRN4Q9NRL3 753 aa17.33■□□□□ 0.36
ABCD3-201ENST00000315713 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
ABCD3-201ENST00000315713 AKAP12Q02952 1782 aa17.31■□□□□ 0.36
ABCD3-201ENST00000315713 RGPD5Q99666 1765 aa17.31■□□□□ 0.36
ABCD3-201ENST00000315713 ZC3H6P61129 1189 aaKnown RBP17.31■□□□□ 0.36
ABCD3-201ENST00000315713 R3HDM1Q15032 1099 aaKnown RBP17.31■□□□□ 0.36
ABCD3-201ENST00000315713 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
ABCD3-201ENST00000315713 LRRC37A3O60309 1634 aa17.31■□□□□ 0.36
ABCD3-201ENST00000315713 ACEP12821 1306 aa17.3■□□□□ 0.36
ABCD3-201ENST00000315713 TRIM37O94972 964 aa17.3■□□□□ 0.36
ABCD3-201ENST00000315713 EZH2Q15910 746 aaKnown RBP17.3■□□□□ 0.36
ABCD3-201ENST00000315713 CDK19Q9BWU1 502 aa17.3■□□□□ 0.36
ABCD3-201ENST00000315713 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
ABCD3-201ENST00000315713 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
ABCD3-201ENST00000315713 PEAK1Q9H792 1746 aa17.3■□□□□ 0.36
ABCD3-201ENST00000315713 PIK3C2AO00443 1686 aa17.29■□□□□ 0.36
ABCD3-201ENST00000315713 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
ABCD3-201ENST00000315713 NBPF1Q3BBV0 1214 aa17.29■□□□□ 0.36
ABCD3-201ENST00000315713 USP35Q9P2H5 1018 aa17.29■□□□□ 0.36
ABCD3-201ENST00000315713 USP19O94966 1318 aa17.27■□□□□ 0.36
ABCD3-201ENST00000315713 PPIP5K1Q6PFW1 1433 aa17.27■□□□□ 0.35
ABCD3-201ENST00000315713 COL18A1P39060 1754 aa17.27■□□□□ 0.35
ABCD3-201ENST00000315713 COL5A2P05997 1499 aaPredicted RBP17.26■□□□□ 0.35
ABCD3-201ENST00000315713 FAM196AQ6ZSG2 479 aa17.26■□□□□ 0.35
ABCD3-201ENST00000315713 CAMKK2Q96RR4 588 aa17.26■□□□□ 0.35
ABCD3-201ENST00000315713 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
ABCD3-201ENST00000315713 CPDO75976 1380 aa17.26■□□□□ 0.35
ABCD3-201ENST00000315713 NBPF8Q3BBV2 869 aa17.25■□□□□ 0.35
ABCD3-201ENST00000315713 LARP1Q6PKG0 1096 aaKnown RBP17.25■□□□□ 0.35
ABCD3-201ENST00000315713 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
ABCD3-201ENST00000315713 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
ABCD3-201ENST00000315713 SLIT3O75094 1523 aa17.24■□□□□ 0.35
ABCD3-201ENST00000315713 PLEKHG3A1L390 1219 aa17.23■□□□□ 0.35
ABCD3-201ENST00000315713 APBA3O96018 575 aa17.23■□□□□ 0.35
ABCD3-201ENST00000315713 EVA1CP58658 441 aa17.23■□□□□ 0.35
ABCD3-201ENST00000315713 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
ABCD3-201ENST00000315713 ABTB2Q8N961 1025 aa17.23■□□□□ 0.35
ABCD3-201ENST00000315713 CASZ1Q86V15 1759 aa17.21■□□□□ 0.35
ABCD3-201ENST00000315713 TCP11L2Q8N4U5 519 aa17.21■□□□□ 0.35
ABCD3-201ENST00000315713 PDE3BQ13370 1112 aa17.2■□□□□ 0.34
ABCD3-201ENST00000315713 USP6P35125 1406 aa17.2■□□□□ 0.34
ABCD3-201ENST00000315713 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
ABCD3-201ENST00000315713 CRB1P82279 1406 aa17.19■□□□□ 0.34
ABCD3-201ENST00000315713 CENPJQ9HC77 1338 aaPredicted RBP17.19■□□□□ 0.34
ABCD3-201ENST00000315713 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
ABCD3-201ENST00000315713 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
ABCD3-201ENST00000315713 MON2Q7Z3U7 1717 aa17.18■□□□□ 0.34
ABCD3-201ENST00000315713 OVOS2A0A0G2JMS6 1433 aa17.17■□□□□ 0.34
ABCD3-201ENST00000315713 OVOS2A0A0J9YW53 1432 aa17.17■□□□□ 0.34
ABCD3-201ENST00000315713 GCP02774 474 aa17.17■□□□□ 0.34
ABCD3-201ENST00000315713 OVOS2Q6IE36 1432 aa17.17■□□□□ 0.34
ABCD3-201ENST00000315713 CARD11Q9BXL7 1154 aa17.17■□□□□ 0.34
ABCD3-201ENST00000315713 LTN1O94822 1766 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms