RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 HOMER1Q86YM7 354 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 SSH1Q8WYL5 1049 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 IFT57Q9NWB7 429 aa8.55□□□□□ -1.04
GAPVD1-203ENST00000312123 FAM177BA6PVY3 158 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 ATP2B1P20020 1258 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 TNNT3P45378 269 aaPredicted RBP8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 GCC1Q96CN9 775 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 FMNL2Q96PY5 1086 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 SDF4Q9BRK5 362 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 RAD21O60216 631 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 GNAI2P04899 355 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 MCM4P33991 863 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 CEBPZQ03701 1054 aaKnown RBP8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 RABEP1Q15276 862 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 SIL1Q9H173 461 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 TRIM29Q14134 588 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 CCDC73Q6ZRK6 1079 aa8.54□□□□□ -1.04
GAPVD1-203ENST00000312123 DNAJC2Q99543 621 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 EXOC6BQ9Y2D4 811 aa8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 GAS2L2Q8NHY3 880 aa8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 RARSP54136 660 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 WAPLQ7Z5K2 1190 aa8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 RALYLQ86SE5 291 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 CNTROBQ8N137 903 aa8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 LRRFIP1Q32MZ4 808 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 ESCO1Q5FWF5 840 aa8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.53□□□□□ -1.04
GAPVD1-203ENST00000312123 EHBP1L1Q8N3D4 1523 aa8.52□□□□□ -1.05
GAPVD1-203ENST00000312123 K7ELQ4 463 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-203ENST00000312123 NSD3Q9BZ95 1437 aa8.52□□□□□ -1.05
GAPVD1-203ENST00000312123 STK3Q13188 491 aa8.52□□□□□ -1.05
GAPVD1-203ENST00000312123 UPF3BQ9BZI7 483 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-203ENST00000312123 TMX4Q9H1E5 349 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-203ENST00000312123 MTMR7Q9Y216 660 aa8.52□□□□□ -1.05
GAPVD1-203ENST00000312123 EPRSP07814 1512 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-203ENST00000312123 DUSP27Q5VZP5 1158 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 VPS37DQ86XT2 251 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 FYB1O15117 783 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 RBM10P98175 930 aaKnown RBP8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 TSR1Q2NL82 804 aaKnown RBP8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 MCM10Q7L590 875 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 GOLGA6L1Q8N7Z2 621 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 SPC24Q8NBT2 197 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 TRIM5Q9C035 493 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 EFCAB5A4FU69 1503 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 DHX16O60231 1041 aaKnown RBP8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 SMARCA5O60264 1052 aaPredicted RBP8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 FBLN1P23142 703 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 STK11IPQ8N1F8 1099 aa8.51□□□□□ -1.05
GAPVD1-203ENST00000312123 SRGAP3O43295 1099 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 MBD3O95983 291 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 DDX54Q8TDD1 881 aaKnown RBP8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 CHMP4CQ96CF2 233 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 LRRCC1Q9C099 1032 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 ADGRF5Q8IZF2 1346 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 XPCQ01831 940 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 ZNF530Q6P9A1 599 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 GRPEL1Q9HAV7 217 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 SLC52A1Q9NWF4 448 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 ABCC5O15440 1437 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 SRCIN1Q9C0H9 1055 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 FCHSD2O94868 740 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 PCMTD1Q96MG8 357 aaPredicted RBP8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 ARHGEF11O15085 1522 aa8.5□□□□□ -1.05
GAPVD1-203ENST00000312123 MYL6BP14649 208 aa8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 ZNF771Q7L3S4 317 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 TPM1P09493 284 aa8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 ATF3P18847 181 aa8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 NFE2L2Q16236 605 aa8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 A0A0U1RQG5 324 aaPredicted RBP8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 F6X3S4 739 aa8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 CWC27Q6UX04 472 aaKnown RBP8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 EMILIN1Q9Y6C2 1016 aa8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 CCDC61Q9Y6R9 512 aa8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 PLB1Q6P1J6 1458 aa8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 NCOA1Q15788 1441 aa8.49□□□□□ -1.05
GAPVD1-203ENST00000312123 IGHDP01880 384 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 CT47B1P0C2W7 299 aaPredicted RBP8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 PSMA5P28066 241 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 CCT4P50991 539 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 PLEKHO1Q53GL0 409 aaPredicted RBP8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 SNAPC4Q5SXM2 1469 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 MCM2P49736 904 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 FERMT3Q86UX7 667 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 NME9Q86XW9 330 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 NUTM1Q86Y26 1132 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 TBC1D2Q9BYX2 928 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 TSPY26PQ9H489 355 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 ESPNB1AK53 854 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 TRIM27P14373 513 aa8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 SAFBQ15424 915 aaKnown RBP eCLIP8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 SAMD1Q6SPF0 538 aaPredicted RBP8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 NUDT16Q96DE0 195 aaKnown RBP8.48□□□□□ -1.05
GAPVD1-203ENST00000312123 RTEL1-TNFRSF6BF6WH68 1400 aa8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 PCF11O94913 1555 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 KINO60870 393 aaKnown RBP8.47□□□□□ -1.05
GAPVD1-203ENST00000312123 RRP12Q5JTH9 1297 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms