RNA–Protein interactions for RNA: ENST00000309755.8

KLHL3-201, Transcript of kelch like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL3, Length 6,806 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-201ENST00000309755 SYTL4Q96C24 671 aaPredicted RBP13.22□□□□□ -0.29
KLHL3-201ENST00000309755 DNAJC2Q99543 621 aaKnown RBP13.22□□□□□ -0.29
KLHL3-201ENST00000309755 EXOSC9Q06265 439 aaKnown RBP13.21□□□□□ -0.29
KLHL3-201ENST00000309755 DHX37Q8IY37 1157 aaKnown RBP13.21□□□□□ -0.29
KLHL3-201ENST00000309755 TNMDQ9H2S6 317 aa13.21□□□□□ -0.29
KLHL3-201ENST00000309755 PDCP20941 246 aa13.21□□□□□ -0.29
KLHL3-201ENST00000309755 NOB1Q9ULX3 412 aaKnown RBP13.21□□□□□ -0.29
KLHL3-201ENST00000309755 ESPNB1AK53 854 aa13.21□□□□□ -0.3
KLHL3-201ENST00000309755 MTHFSP49914 203 aa13.21□□□□□ -0.3
KLHL3-201ENST00000309755 STK3Q13188 491 aa13.21□□□□□ -0.3
KLHL3-201ENST00000309755 MAPK8IP2Q13387 824 aaPredicted RBP13.21□□□□□ -0.3
KLHL3-201ENST00000309755 CLASRPQ8N2M8 674 aaKnown RBP13.21□□□□□ -0.3
KLHL3-201ENST00000309755 RRP9O43818 475 aaKnown RBP13.2□□□□□ -0.3
KLHL3-201ENST00000309755 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
KLHL3-201ENST00000309755 STK38Q15208 465 aa13.2□□□□□ -0.3
KLHL3-201ENST00000309755 ZNF396Q96N95 335 aaPredicted RBP13.2□□□□□ -0.3
KLHL3-201ENST00000309755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.3
KLHL3-201ENST00000309755 ERICH4A6NGS2 130 aa13.2□□□□□ -0.3
KLHL3-201ENST00000309755 MYO6Q9UM54 1294 aa13.2□□□□□ -0.3
KLHL3-201ENST00000309755 MAGEC2Q9UBF1 373 aaPredicted RBP13.2□□□□□ -0.3
KLHL3-201ENST00000309755 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
KLHL3-201ENST00000309755 MSH5O43196 834 aa13.19□□□□□ -0.3
KLHL3-201ENST00000309755 PODXL2Q9NZ53 605 aa13.19□□□□□ -0.3
KLHL3-201ENST00000309755 GCC1Q96CN9 775 aa13.19□□□□□ -0.3
KLHL3-201ENST00000309755 MCM4P33991 863 aa13.18□□□□□ -0.3
KLHL3-201ENST00000309755 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
KLHL3-201ENST00000309755 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
KLHL3-201ENST00000309755 STK11IPQ8N1F8 1099 aa13.18□□□□□ -0.3
KLHL3-201ENST00000309755 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
KLHL3-201ENST00000309755 KIAA0754O94854 1291 aa13.18□□□□□ -0.3
KLHL3-201ENST00000309755 PDE3AQ14432 1141 aa13.18□□□□□ -0.3
KLHL3-201ENST00000309755 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
KLHL3-201ENST00000309755 GNAI3P08754 354 aa13.17□□□□□ -0.3
KLHL3-201ENST00000309755 TOP2AP11388 1531 aaKnown RBP13.17□□□□□ -0.3
KLHL3-201ENST00000309755 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
KLHL3-201ENST00000309755 PSME1Q06323 249 aa13.17□□□□□ -0.3
KLHL3-201ENST00000309755 WDR33Q9C0J8 1336 aaKnown RBP13.17□□□□□ -0.3
KLHL3-201ENST00000309755 FAM193AP78312 1265 aa13.16□□□□□ -0.3
KLHL3-201ENST00000309755 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
KLHL3-201ENST00000309755 ME1P48163 572 aa13.16□□□□□ -0.3
KLHL3-201ENST00000309755 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
KLHL3-201ENST00000309755 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
KLHL3-201ENST00000309755 PRDM10Q9NQV6 1147 aa13.16□□□□□ -0.3
KLHL3-201ENST00000309755 CYP46A1Q9Y6A2 500 aa13.16□□□□□ -0.3
KLHL3-201ENST00000309755 GOLGA6L10A6NI86 522 aa13.15□□□□□ -0.3
KLHL3-201ENST00000309755 SART3Q15020 963 aaKnown RBP13.15□□□□□ -0.3
KLHL3-201ENST00000309755 TWISTNBQ3B726 338 aaPredicted RBP13.15□□□□□ -0.3
KLHL3-201ENST00000309755 CCDC30Q5VVM6 783 aa13.15□□□□□ -0.3
KLHL3-201ENST00000309755 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
KLHL3-201ENST00000309755 NUTM2GQ5VZR2 741 aa13.15□□□□□ -0.3
KLHL3-201ENST00000309755 CENPHQ9H3R5 247 aa13.15□□□□□ -0.3
KLHL3-201ENST00000309755 ZNHIT6Q9NWK9 470 aaKnown RBP13.15□□□□□ -0.3
KLHL3-201ENST00000309755 MIA2Q96PC5 1412 aa13.15□□□□□ -0.3
KLHL3-201ENST00000309755 HIP1O00291 1037 aa13.15□□□□□ -0.3
KLHL3-201ENST00000309755 GNAI2P04899 355 aa13.14□□□□□ -0.31
KLHL3-201ENST00000309755 KRT85P78386 507 aa13.14□□□□□ -0.31
KLHL3-201ENST00000309755 CCDC181Q5TID7 509 aa13.14□□□□□ -0.31
KLHL3-201ENST00000309755 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
KLHL3-201ENST00000309755 NEFHP12036 1026 aa13.14□□□□□ -0.31
KLHL3-201ENST00000309755 TXLNAP40222 546 aa13.14□□□□□ -0.31
KLHL3-201ENST00000309755 LARP1BQ659C4 914 aaKnown RBP13.14□□□□□ -0.31
KLHL3-201ENST00000309755 PDCL2Q8N4E4 241 aa13.14□□□□□ -0.31
KLHL3-201ENST00000309755 ZNF644Q9H582 1327 aaPredicted RBP13.14□□□□□ -0.31
KLHL3-201ENST00000309755 EIF3JO75822 258 aaKnown RBP13.14□□□□□ -0.31
KLHL3-201ENST00000309755 PRKAR2BP31323 418 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 TMEM132EQ6IEE7 984 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 ERLIN1O75477 346 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 ZNF428Q96B54 188 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 SYCE3A1L190 88 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
KLHL3-201ENST00000309755 DEF6Q9H4E7 631 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 ERLIN2O94905 339 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 CBX1P83916 185 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
KLHL3-201ENST00000309755 CHD1LQ86WJ1 897 aa13.12□□□□□ -0.31
KLHL3-201ENST00000309755 FGD6Q6ZV73 1430 aa13.12□□□□□ -0.31
KLHL3-201ENST00000309755 RAPGEF4Q8WZA2 1011 aa13.12□□□□□ -0.31
KLHL3-201ENST00000309755 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
KLHL3-201ENST00000309755 CCDC102AQ96A19 550 aa13.12□□□□□ -0.31
KLHL3-201ENST00000309755 SPATA32Q96LK8 384 aa13.12□□□□□ -0.31
KLHL3-201ENST00000309755 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
KLHL3-201ENST00000309755 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
KLHL3-201ENST00000309755 PIP4K2AP48426 406 aaPredicted RBP13.11□□□□□ -0.31
KLHL3-201ENST00000309755 IKQ13123 557 aaPredicted RBP13.11□□□□□ -0.31
KLHL3-201ENST00000309755 CCAR1Q8IX12 1150 aaKnown RBP13.11□□□□□ -0.31
KLHL3-201ENST00000309755 NUP62CLQ9H1M0 184 aa13.11□□□□□ -0.31
KLHL3-201ENST00000309755 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
KLHL3-201ENST00000309755 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
KLHL3-201ENST00000309755 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
KLHL3-201ENST00000309755 SYCP1Q15431 976 aa13.1□□□□□ -0.31
KLHL3-201ENST00000309755 DACH1Q9UI36 760 aa13.1□□□□□ -0.31
KLHL3-201ENST00000309755 SMG6Q86US8 1419 aaKnown RBP13.1□□□□□ -0.31
KLHL3-201ENST00000309755 KRT18P05783 430 aaKnown RBP13.1□□□□□ -0.31
KLHL3-201ENST00000309755 DHX8Q14562 1220 aaKnown RBP13.1□□□□□ -0.31
KLHL3-201ENST00000309755 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
KLHL3-201ENST00000309755 ENOX2Q16206 610 aaKnown RBP13.1□□□□□ -0.31
KLHL3-201ENST00000309755 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
KLHL3-201ENST00000309755 CCDC184Q52MB2 194 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms