RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 NUTM2GQ5VZR2 741 aa24.31■■□□□ 1.48
HMGCLL1-202ENST00000308161 UPF1Q92900 1129 aaKnown RBP eCLIP24.31■■□□□ 1.48
HMGCLL1-202ENST00000308161 GJD4Q96KN9 370 aaPredicted RBP24.31■■□□□ 1.48
HMGCLL1-202ENST00000308161 PPIP5K1Q6PFW1 1433 aa24.31■■□□□ 1.48
HMGCLL1-202ENST00000308161 CCDC9Q9Y3X0 531 aaKnown RBP24.3■■□□□ 1.48
HMGCLL1-202ENST00000308161 POLR3AO14802 1390 aaPredicted RBP24.29■■□□□ 1.48
HMGCLL1-202ENST00000308161 PLEKHG3A1L390 1219 aa24.29■■□□□ 1.48
HMGCLL1-202ENST00000308161 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.28■■□□□ 1.48
HMGCLL1-202ENST00000308161 PLCH1Q4KWH8 1693 aa24.28■■□□□ 1.48
HMGCLL1-202ENST00000308161 EVC2Q86UK5 1308 aa24.28■■□□□ 1.48
HMGCLL1-202ENST00000308161 FAM83GA6ND36 823 aa24.28■■□□□ 1.48
HMGCLL1-202ENST00000308161 CARD11Q9BXL7 1154 aa24.27■■□□□ 1.48
HMGCLL1-202ENST00000308161 RALGAPBQ86X10 1494 aa24.25■■□□□ 1.47
HMGCLL1-202ENST00000308161 CABP1Q9NZU7 370 aa24.25■■□□□ 1.47
HMGCLL1-202ENST00000308161 ABTB2Q8N961 1025 aa24.23■■□□□ 1.47
HMGCLL1-202ENST00000308161 PRDM11Q9NQV5 511 aa24.23■■□□□ 1.47
HMGCLL1-202ENST00000308161 BTG4Q9NY30 223 aa24.23■■□□□ 1.47
HMGCLL1-202ENST00000308161 GLI3P10071 1580 aa24.23■■□□□ 1.47
HMGCLL1-202ENST00000308161 NWD2Q9ULI1 1742 aa24.22■■□□□ 1.47
HMGCLL1-202ENST00000308161 VPS72Q15906 364 aa24.22■■□□□ 1.47
HMGCLL1-202ENST00000308161 ATAD2Q6PL18 1390 aa24.22■■□□□ 1.47
HMGCLL1-202ENST00000308161 CRYBG1Q9Y4K1 1723 aa24.21■■□□□ 1.47
HMGCLL1-202ENST00000308161 COL14A1Q05707 1796 aaKnown RBP24.19■■□□□ 1.46
HMGCLL1-202ENST00000308161 ZC3H6P61129 1189 aaKnown RBP24.19■■□□□ 1.46
HMGCLL1-202ENST00000308161 PHRF1Q9P1Y6 1649 aaKnown RBP24.18■■□□□ 1.46
HMGCLL1-202ENST00000308161 A0A0G2JS52 829 aa24.18■■□□□ 1.46
HMGCLL1-202ENST00000308161 MYT1Q01538 1121 aa24.18■■□□□ 1.46
HMGCLL1-202ENST00000308161 CHRNA2Q15822 529 aa24.18■■□□□ 1.46
HMGCLL1-202ENST00000308161 PCGF6Q9BYE7 350 aa24.18■■□□□ 1.46
HMGCLL1-202ENST00000308161 KIAA0232Q92628 1395 aa24.18■■□□□ 1.46
HMGCLL1-202ENST00000308161 NRAPQ86VF7 1730 aa24.15■■□□□ 1.46
HMGCLL1-202ENST00000308161 USP6P35125 1406 aa24.15■■□□□ 1.46
HMGCLL1-202ENST00000308161 NLRP13Q86W25 1043 aa24.14■■□□□ 1.46
HMGCLL1-202ENST00000308161 SEPT12Q8IYM1 358 aa24.14■■□□□ 1.46
HMGCLL1-202ENST00000308161 STRN4Q9NRL3 753 aa24.12■■□□□ 1.45
HMGCLL1-202ENST00000308161 EP400Q96L91 3159 aa24.12■■□□□ 1.45
HMGCLL1-202ENST00000308161 ZBTB7CA1YPR0 619 aa24.11■■□□□ 1.45
HMGCLL1-202ENST00000308161 FAM98CQ17RN3 349 aaKnown RBP24.11■■□□□ 1.45
HMGCLL1-202ENST00000308161 NRKQ7Z2Y5 1582 aa24.11■■□□□ 1.45
HMGCLL1-202ENST00000308161 NLRP6P59044 892 aa24.1■■□□□ 1.45
HMGCLL1-202ENST00000308161 USP19O94966 1318 aa24.1■■□□□ 1.45
HMGCLL1-202ENST00000308161 BRD4O60885 1362 aaPredicted RBP24.1■■□□□ 1.45
HMGCLL1-202ENST00000308161 SBNO2Q9Y2G9 1366 aa24.1■■□□□ 1.45
HMGCLL1-202ENST00000308161 BRWD3Q6RI45 1802 aa24.08■■□□□ 1.45
HMGCLL1-202ENST00000308161 GCP02774 474 aa24.08■■□□□ 1.44
HMGCLL1-202ENST00000308161 TMC1Q8TDI8 760 aa24.08■■□□□ 1.44
HMGCLL1-202ENST00000308161 EVA1CP58658 441 aa24.07■■□□□ 1.44
HMGCLL1-202ENST00000308161 ZNF692Q9BU19 519 aaPredicted RBP24.07■■□□□ 1.44
HMGCLL1-202ENST00000308161 SPATA31A5Q5VU36 1347 aa24.07■■□□□ 1.44
HMGCLL1-202ENST00000308161 SPATA31A7Q8IWB4 1347 aa24.07■■□□□ 1.44
HMGCLL1-202ENST00000308161 KTN1Q86UP2 1357 aaKnown RBP24.06■■□□□ 1.44
HMGCLL1-202ENST00000308161 ONECUT3O60422 494 aaPredicted RBP24.05■■□□□ 1.44
HMGCLL1-202ENST00000308161 SSH2Q76I76 1423 aa24.05■■□□□ 1.44
HMGCLL1-202ENST00000308161 KRT27Q7Z3Y8 459 aa24.05■■□□□ 1.44
HMGCLL1-202ENST00000308161 TTC21BQ7Z4L5 1316 aa24.05■■□□□ 1.44
HMGCLL1-202ENST00000308161 USP35Q9P2H5 1018 aa24.05■■□□□ 1.44
HMGCLL1-202ENST00000308161 AKAP12Q02952 1782 aa24.04■■□□□ 1.44
HMGCLL1-202ENST00000308161 PIK3C2AO00443 1686 aa24.04■■□□□ 1.44
HMGCLL1-202ENST00000308161 ST20-MTHFSA0A0A6YYL1 179 aa24.04■■□□□ 1.44
HMGCLL1-202ENST00000308161 SOX12O15370 315 aa24.04■■□□□ 1.44
HMGCLL1-202ENST00000308161 CPDO75976 1380 aa24.03■■□□□ 1.44
HMGCLL1-202ENST00000308161 CPSF1Q10570 1443 aaKnown RBP24.01■■□□□ 1.43
HMGCLL1-202ENST00000308161 CAMTA1Q9Y6Y1 1673 aa24.01■■□□□ 1.43
HMGCLL1-202ENST00000308161 SPATA31A1Q5TZJ5 1347 aa24.01■■□□□ 1.43
HMGCLL1-202ENST00000308161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.01■■□□□ 1.43
HMGCLL1-202ENST00000308161 SLC12A5Q9H2X9 1139 aa24■■□□□ 1.43
HMGCLL1-202ENST00000308161 TTC21AQ8NDW8 1320 aa23.99■■□□□ 1.43
HMGCLL1-202ENST00000308161 SLIT3O75094 1523 aa23.99■■□□□ 1.43
HMGCLL1-202ENST00000308161 LARP1Q6PKG0 1096 aaKnown RBP23.99■■□□□ 1.43
HMGCLL1-202ENST00000308161 HDGFL2Q7Z4V5 671 aaPredicted RBP23.98■■□□□ 1.43
HMGCLL1-202ENST00000308161 LMO7Q8WWI1 1683 aa23.97■■□□□ 1.43
HMGCLL1-202ENST00000308161 FAM182BQ5T319 152 aa23.97■■□□□ 1.43
HMGCLL1-202ENST00000308161 CCDC125Q86Z20 511 aa23.97■■□□□ 1.43
HMGCLL1-202ENST00000308161 TESK2Q96S53 571 aa23.97■■□□□ 1.43
HMGCLL1-202ENST00000308161 MON2Q7Z3U7 1717 aa23.97■■□□□ 1.43
HMGCLL1-202ENST00000308161 USP47Q96K76 1375 aa23.97■■□□□ 1.43
HMGCLL1-202ENST00000308161 BLMP54132 1417 aaPredicted RBP23.96■■□□□ 1.43
HMGCLL1-202ENST00000308161 SF3B2Q13435 895 aaKnown RBP23.96■■□□□ 1.43
HMGCLL1-202ENST00000308161 CCER1Q8TC90 406 aaPredicted RBP23.95■■□□□ 1.42
HMGCLL1-202ENST00000308161 ZRANB1Q9UGI0 708 aa23.95■■□□□ 1.42
HMGCLL1-202ENST00000308161 CD163L1Q9NR16 1453 aa23.95■■□□□ 1.42
HMGCLL1-202ENST00000308161 CLSPNQ9HAW4 1339 aa23.95■■□□□ 1.42
HMGCLL1-202ENST00000308161 TERF2IPQ9NYB0 399 aa23.94■■□□□ 1.42
HMGCLL1-202ENST00000308161 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
HMGCLL1-202ENST00000308161 THSD7AQ9UPZ6 1657 aa23.94■■□□□ 1.42
HMGCLL1-202ENST00000308161 NME9Q86XW9 330 aa23.93■■□□□ 1.42
HMGCLL1-202ENST00000308161 KCNH5Q8NCM2 988 aa23.93■■□□□ 1.42
HMGCLL1-202ENST00000308161 AATKQ6ZMQ8 1374 aa23.92■■□□□ 1.42
HMGCLL1-202ENST00000308161 A0A1W2PP64 1363 aa23.91■■□□□ 1.42
HMGCLL1-202ENST00000308161 DEFB132Q7Z7B7 95 aa23.91■■□□□ 1.42
HMGCLL1-202ENST00000308161 TCP11L2Q8N4U5 519 aa23.91■■□□□ 1.42
HMGCLL1-202ENST00000308161 PUS7Q96PZ0 661 aaKnown RBP23.9■■□□□ 1.42
HMGCLL1-202ENST00000308161 TIMELESSQ9UNS1 1208 aa23.9■■□□□ 1.42
HMGCLL1-202ENST00000308161 SLC24A1O60721 1099 aa23.89■■□□□ 1.42
HMGCLL1-202ENST00000308161 TMF1P82094 1093 aa23.89■■□□□ 1.42
HMGCLL1-202ENST00000308161 EDC4Q6P2E9 1401 aaKnown RBP23.88■■□□□ 1.41
HMGCLL1-202ENST00000308161 BARGINQ6ZT62 677 aa23.88■■□□□ 1.41
HMGCLL1-202ENST00000308161 TOM1L2Q6ZVM7 507 aa23.88■■□□□ 1.41
HMGCLL1-202ENST00000308161 ARHGEF25Q86VW2 580 aa23.88■■□□□ 1.41
HMGCLL1-202ENST00000308161 AXIN2Q9Y2T1 843 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms