RNA–Protein interactions for RNA: ENST00000306627.7

UBE2E1-201, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E1, Length 1,511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-201ENST00000306627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.11■■□□□ 1.772e-6■■■■□ 22.3
UBE2E1-201ENST00000306627 PMFBP1Q8TBY8 1022 aa26.11■■□□□ 1.77
UBE2E1-201ENST00000306627 PNISRQ8TF01 805 aaKnown RBP26.11■■□□□ 1.77
UBE2E1-201ENST00000306627 POLR3AO14802 1390 aaPredicted RBP26.1■■□□□ 1.77
UBE2E1-201ENST00000306627 ZNF692Q9BU19 519 aaPredicted RBP26.09■■□□□ 1.77
UBE2E1-201ENST00000306627 USP6P35125 1406 aa26.08■■□□□ 1.77
UBE2E1-201ENST00000306627 TNNT2P45379 298 aaPredicted RBP26.08■■□□□ 1.77
UBE2E1-201ENST00000306627 NCOA3Q9Y6Q9 1424 aa26.06■■□□□ 1.76
UBE2E1-201ENST00000306627 SSH2Q76I76 1423 aa26.05■■□□□ 1.76
UBE2E1-201ENST00000306627 NME9Q86XW9 330 aa26.05■■□□□ 1.76
UBE2E1-201ENST00000306627 C19orf44Q9H6X5 657 aa26.04■■□□□ 1.76
UBE2E1-201ENST00000306627 ZRANB1Q9UGI0 708 aa26.04■■□□□ 1.76
UBE2E1-201ENST00000306627 TTC21BQ7Z4L5 1316 aa26.03■■□□□ 1.76
UBE2E1-201ENST00000306627 NGDNQ8NEJ9 315 aaKnown RBP26.03■■□□□ 1.76
UBE2E1-201ENST00000306627 MED1Q15648 1581 aaPredicted RBP26.02■■□□□ 1.76
UBE2E1-201ENST00000306627 PHF8Q9UPP1 1060 aa26.01■■□□□ 1.75
UBE2E1-201ENST00000306627 SOCS7O14512 581 aa26■■□□□ 1.75
UBE2E1-201ENST00000306627 DCCP43146 1447 aa26■■□□□ 1.75
UBE2E1-201ENST00000306627 C1orf167Q5SNV9 1468 aa25.98■■□□□ 1.75
UBE2E1-201ENST00000306627 ESCO1Q5FWF5 840 aa25.98■■□□□ 1.75
UBE2E1-201ENST00000306627 MST1RQ04912 1400 aa25.97■■□□□ 1.75
UBE2E1-201ENST00000306627 CENPBP07199 599 aaPredicted RBP25.97■■□□□ 1.75
UBE2E1-201ENST00000306627 ORAI2Q96SN7 254 aa25.97■■□□□ 1.75
UBE2E1-201ENST00000306627 HNRNPUQ00839 825 aaKnown RBP eCLIP25.96■■□□□ 1.75
UBE2E1-201ENST00000306627 PIK3C2AO00443 1686 aa25.95■■□□□ 1.75
UBE2E1-201ENST00000306627 MTHFSP49914 203 aa25.95■■□□□ 1.74
UBE2E1-201ENST00000306627 SHPRHQ149N8 1683 aa25.95■■□□□ 1.74
UBE2E1-201ENST00000306627 OVOS2A0A0J9YW53 1432 aa25.94■■□□□ 1.74
UBE2E1-201ENST00000306627 OVOS2Q6IE36 1432 aa25.94■■□□□ 1.74
UBE2E1-201ENST00000306627 ATF3P18847 181 aa25.93■■□□□ 1.74
UBE2E1-201ENST00000306627 MSH6P52701 1360 aa25.93■■□□□ 1.74
UBE2E1-201ENST00000306627 TTC21AQ8NDW8 1320 aa25.93■■□□□ 1.74
UBE2E1-201ENST00000306627 MAP2P11137 1827 aaKnown RBP25.93■■□□□ 1.74
UBE2E1-201ENST00000306627 FBLN1P23142 703 aa25.93■■□□□ 1.74
UBE2E1-201ENST00000306627 KIF1AQ12756 1690 aa25.92■■□□□ 1.74
UBE2E1-201ENST00000306627 COG3Q96JB2 828 aa25.92■■□□□ 1.74
UBE2E1-201ENST00000306627 MARF1Q9Y4F3 1742 aaKnown RBP25.91■■□□□ 1.74
UBE2E1-201ENST00000306627 CADPS2Q86UW7 1296 aa25.88■■□□□ 1.73
UBE2E1-201ENST00000306627 ADAMTS8Q9UP79 889 aa25.88■■□□□ 1.73
UBE2E1-201ENST00000306627 COL3A1P02461 1466 aaPredicted RBP25.88■■□□□ 1.73
UBE2E1-201ENST00000306627 USP54Q70EL1 1684 aa25.88■■□□□ 1.73
UBE2E1-201ENST00000306627 BLMP54132 1417 aaPredicted RBP25.88■■□□□ 1.73
UBE2E1-201ENST00000306627 USP31Q70CQ4 1352 aa25.87■■□□□ 1.73
UBE2E1-201ENST00000306627 AATKQ6ZMQ8 1374 aa25.86■■□□□ 1.73
UBE2E1-201ENST00000306627 POLKQ9UBT6 870 aa25.86■■□□□ 1.73
UBE2E1-201ENST00000306627 TRPM3Q9HCF6 1732 aaPredicted RBP25.86■■□□□ 1.73
UBE2E1-201ENST00000306627 INSRP06213 1382 aa25.85■■□□□ 1.73
UBE2E1-201ENST00000306627 FOXO3O43524 673 aa25.85■■□□□ 1.73
UBE2E1-201ENST00000306627 WDR43Q15061 677 aaKnown RBP eCLIP25.85■■□□□ 1.73
UBE2E1-201ENST00000306627 ROBO1Q9Y6N7 1651 aa25.85■■□□□ 1.73
UBE2E1-201ENST00000306627 SMG6Q86US8 1419 aaKnown RBP25.85■■□□□ 1.73
UBE2E1-201ENST00000306627 SENP3-EIF4A1A0A087X0R7 540 aa25.84■■□□□ 1.73
UBE2E1-201ENST00000306627 PSME1Q06323 249 aa25.84■■□□□ 1.73
UBE2E1-201ENST00000306627 CFAP53Q96M91 514 aa25.83■■□□□ 1.72
UBE2E1-201ENST00000306627 EMILIN1Q9Y6C2 1016 aa25.83■■□□□ 1.72
UBE2E1-201ENST00000306627 PNPLA6Q8IY17 1366 aa25.82■■□□□ 1.72
UBE2E1-201ENST00000306627 PAK3O75914 559 aaPredicted RBP25.82■■□□□ 1.72
UBE2E1-201ENST00000306627 XPCQ01831 940 aaPredicted RBP25.82■■□□□ 1.72
UBE2E1-201ENST00000306627 RRS1Q15050 365 aaKnown RBP25.8■■□□□ 1.72
UBE2E1-201ENST00000306627 NUTM2GQ5VZR2 741 aa25.8■■□□□ 1.72
UBE2E1-201ENST00000306627 ZBED9Q6R2W3 1325 aa25.8■■□□□ 1.72
UBE2E1-201ENST00000306627 NLRP6P59044 892 aa25.79■■□□□ 1.72
UBE2E1-201ENST00000306627 ABTB2Q8N961 1025 aa25.79■■□□□ 1.72
UBE2E1-201ENST00000306627 PEAK1Q9H792 1746 aa25.78■■□□□ 1.72
UBE2E1-201ENST00000306627 CDK12Q9NYV4 1490 aaPredicted RBP25.78■■□□□ 1.72
UBE2E1-201ENST00000306627 DDX17Q92841 729 aaKnown RBP25.78■■□□□ 1.72
UBE2E1-201ENST00000306627 PHF23Q9BUL5 403 aaPredicted RBP25.78■■□□□ 1.72
UBE2E1-201ENST00000306627 KRT28Q7Z3Y7 464 aa25.77■■□□□ 1.72
UBE2E1-201ENST00000306627 PPM1GO15355 546 aaPredicted RBP25.76■■□□□ 1.71
UBE2E1-201ENST00000306627 SOX12O15370 315 aa25.75■■□□□ 1.71
UBE2E1-201ENST00000306627 ALS2Q96Q42 1657 aa25.75■■□□□ 1.71
UBE2E1-201ENST00000306627 BRINP3Q76B58 766 aa25.74■■□□□ 1.71
UBE2E1-201ENST00000306627 SLAIN2Q9P270 581 aa25.74■■□□□ 1.71
UBE2E1-201ENST00000306627 CCDC146Q8IYE0 955 aa25.73■■□□□ 1.71
UBE2E1-201ENST00000306627 PXDNQ92626 1479 aa25.72■■□□□ 1.71
UBE2E1-201ENST00000306627 DIAPH1O60610 1272 aaKnown RBP25.72■■□□□ 1.71
UBE2E1-201ENST00000306627 MAP3K19Q56UN5 1328 aa25.7■■□□□ 1.7
UBE2E1-201ENST00000306627 NPHP3Q7Z494 1330 aa25.7■■□□□ 1.7
UBE2E1-201ENST00000306627 PHLPP1O60346 1717 aa25.69■■□□□ 1.7
UBE2E1-201ENST00000306627 NFAT5O94916 1531 aa25.69■■□□□ 1.7
UBE2E1-201ENST00000306627 U2AF1L5P0DN76 240 aaPredicted RBP25.68■■□□□ 1.7
UBE2E1-201ENST00000306627 U2AF1Q01081 240 aaKnown RBP eCLIP25.68■■□□□ 1.77e-6■■■□□ 18.2
UBE2E1-201ENST00000306627 SALL2Q9Y467 1007 aaPredicted RBP25.68■■□□□ 1.7
UBE2E1-201ENST00000306627 SLIT3O75094 1523 aa25.67■■□□□ 1.7
UBE2E1-201ENST00000306627 U2SURPO15042 1029 aaKnown RBP25.67■■□□□ 1.7
UBE2E1-201ENST00000306627 NUDCQ9Y266 331 aa25.67■■□□□ 1.7
UBE2E1-201ENST00000306627 LTN1O94822 1766 aa25.66■■□□□ 1.7
UBE2E1-201ENST00000306627 SBNO1A3KN83 1393 aa25.66■■□□□ 1.7
UBE2E1-201ENST00000306627 IL13P35225 146 aa25.66■■□□□ 1.7
UBE2E1-201ENST00000306627 LMOD2Q6P5Q4 547 aa25.64■■□□□ 1.7
UBE2E1-201ENST00000306627 USP19O94966 1318 aa25.64■■□□□ 1.7
UBE2E1-201ENST00000306627 APAF1O14727 1248 aa25.63■■□□□ 1.69
UBE2E1-201ENST00000306627 HSP90AB2PQ58FF8 381 aa25.63■■□□□ 1.69
UBE2E1-201ENST00000306627 RGS17Q9UGC6 210 aaPredicted RBP25.63■■□□□ 1.69
UBE2E1-201ENST00000306627 NHSL1Q5SYE7 1610 aa25.63■■□□□ 1.69
UBE2E1-201ENST00000306627 TNS3Q68CZ2 1445 aa25.63■■□□□ 1.69
UBE2E1-201ENST00000306627 COL16A1Q07092 1604 aaPredicted RBP25.62■■□□□ 1.69
UBE2E1-201ENST00000306627 FLT4P35916 1363 aa25.61■■□□□ 1.69
UBE2E1-201ENST00000306627 EIF4A2Q14240 407 aaKnown RBP25.61■■□□□ 1.69
UBE2E1-201ENST00000306627 RUNDC1Q96C34 613 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms