RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 FAM98CQ17RN3 349 aaKnown RBP10.95□□□□□ -0.66
TM4SF1-201ENST00000305366 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
TM4SF1-201ENST00000305366 RALGAPBQ86X10 1494 aa10.95□□□□□ -0.66
TM4SF1-201ENST00000305366 TNS3Q68CZ2 1445 aa10.95□□□□□ -0.66
TM4SF1-201ENST00000305366 LAMC1P11047 1609 aa10.95□□□□□ -0.66
TM4SF1-201ENST00000305366 GPRASP1Q5JY77 1395 aa10.94□□□□□ -0.66
TM4SF1-201ENST00000305366 FAM182BQ5T319 152 aa10.94□□□□□ -0.66
TM4SF1-201ENST00000305366 SBNO1A3KN83 1393 aa10.94□□□□□ -0.66
TM4SF1-201ENST00000305366 MAPK8IP2Q13387 824 aaPredicted RBP10.93□□□□□ -0.66
TM4SF1-201ENST00000305366 KRT27Q7Z3Y8 459 aa10.93□□□□□ -0.66
TM4SF1-201ENST00000305366 TAOK2Q9UL54 1235 aa10.93□□□□□ -0.66
TM4SF1-201ENST00000305366 ARHGEF10O15013 1369 aa10.93□□□□□ -0.66
TM4SF1-201ENST00000305366 NRXN1Q9ULB1 1477 aa10.93□□□□□ -0.66
TM4SF1-201ENST00000305366 NUDT16Q96DE0 195 aaKnown RBP10.93□□□□□ -0.66
TM4SF1-201ENST00000305366 SLIT2O94813 1529 aa10.92□□□□□ -0.66
TM4SF1-201ENST00000305366 CHRNA2Q15822 529 aa10.92□□□□□ -0.66
TM4SF1-201ENST00000305366 CDK19Q9BWU1 502 aa10.92□□□□□ -0.66
TM4SF1-201ENST00000305366 COL22A1Q8NFW1 1626 aaPredicted RBP10.92□□□□□ -0.66
TM4SF1-201ENST00000305366 TONSLQ96HA7 1378 aa10.92□□□□□ -0.66
TM4SF1-201ENST00000305366 ZC3H6P61129 1189 aaKnown RBP10.91□□□□□ -0.66
TM4SF1-201ENST00000305366 PRDM11Q9NQV5 511 aa10.91□□□□□ -0.66
TM4SF1-201ENST00000305366 STRN4Q9NRL3 753 aa10.91□□□□□ -0.66
TM4SF1-201ENST00000305366 NBPF1Q3BBV0 1214 aa10.9□□□□□ -0.67
TM4SF1-201ENST00000305366 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.67
TM4SF1-201ENST00000305366 USP35Q9P2H5 1018 aa10.9□□□□□ -0.67
TM4SF1-201ENST00000305366 SRCAPQ6ZRS2 3230 aa10.9□□□□□ -0.67
TM4SF1-201ENST00000305366 FMN2Q9NZ56 1722 aa10.89□□□□□ -0.67
TM4SF1-201ENST00000305366 ANKARQ7Z5J8 1434 aa10.89□□□□□ -0.67
TM4SF1-201ENST00000305366 ZBTB7CA1YPR0 619 aa10.89□□□□□ -0.67
TM4SF1-201ENST00000305366 ONECUT3O60422 494 aaPredicted RBP10.89□□□□□ -0.67
TM4SF1-201ENST00000305366 IFT172Q9UG01 1749 aa10.88□□□□□ -0.67
TM4SF1-201ENST00000305366 PSDA5PKW4 1024 aaPredicted RBP10.88□□□□□ -0.67
TM4SF1-201ENST00000305366 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
TM4SF1-201ENST00000305366 EVA1CP58658 441 aa10.88□□□□□ -0.67
TM4SF1-201ENST00000305366 STAC3Q96MF2 364 aa10.88□□□□□ -0.67
TM4SF1-201ENST00000305366 BLMP54132 1417 aaPredicted RBP10.88□□□□□ -0.67
TM4SF1-201ENST00000305366 SRPK2P78362 688 aaKnown RBP10.88□□□□□ -0.67
TM4SF1-201ENST00000305366 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
TM4SF1-201ENST00000305366 ADGRB1O14514 1584 aa10.87□□□□□ -0.67
TM4SF1-201ENST00000305366 GLI3P10071 1580 aa10.87□□□□□ -0.67
TM4SF1-201ENST00000305366 NBPF8Q3BBV2 869 aa10.87□□□□□ -0.67
TM4SF1-201ENST00000305366 ACEP12821 1306 aa10.87□□□□□ -0.67
TM4SF1-201ENST00000305366 KIF1AQ12756 1690 aa10.86□□□□□ -0.67
TM4SF1-201ENST00000305366 DLC1Q96QB1 1528 aa10.86□□□□□ -0.67
TM4SF1-201ENST00000305366 KNDC1Q76NI1 1749 aa10.86□□□□□ -0.67
TM4SF1-201ENST00000305366 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
TM4SF1-201ENST00000305366 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
TM4SF1-201ENST00000305366 ABTB2Q8N961 1025 aa10.86□□□□□ -0.67
TM4SF1-201ENST00000305366 CABP2Q9NPB3 220 aa10.86□□□□□ -0.67
TM4SF1-201ENST00000305366 USP32Q8NFA0 1604 aa10.86□□□□□ -0.67
TM4SF1-201ENST00000305366 KIAA0232Q92628 1395 aa10.86□□□□□ -0.67
TM4SF1-201ENST00000305366 BAG6P46379 1132 aa10.85□□□□□ -0.67
TM4SF1-201ENST00000305366 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
TM4SF1-201ENST00000305366 SPATA31A5Q5VU36 1347 aa10.85□□□□□ -0.67
TM4SF1-201ENST00000305366 SPATA31A7Q8IWB4 1347 aa10.85□□□□□ -0.67
TM4SF1-201ENST00000305366 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
TM4SF1-201ENST00000305366 DDX10Q13206 875 aaKnown RBP10.85□□□□□ -0.67
TM4SF1-201ENST00000305366 TULP4Q9NRJ4 1543 aa10.83□□□□□ -0.68
TM4SF1-201ENST00000305366 TRIM37O94972 964 aa10.83□□□□□ -0.68
TM4SF1-201ENST00000305366 EP400Q96L91 3159 aa10.83□□□□□ -0.68
TM4SF1-201ENST00000305366 RGPD8O14715 1765 aaPredicted RBP10.83□□□□□ -0.68
TM4SF1-201ENST00000305366 PLEKHG3A1L390 1219 aa10.82□□□□□ -0.68
TM4SF1-201ENST00000305366 PDE3BQ13370 1112 aa10.82□□□□□ -0.68
TM4SF1-201ENST00000305366 LARP1Q6PKG0 1096 aaKnown RBP10.82□□□□□ -0.68
TM4SF1-201ENST00000305366 CABP1Q9NZU7 370 aa10.82□□□□□ -0.68
TM4SF1-201ENST00000305366 SPATA31A1Q5TZJ5 1347 aa10.82□□□□□ -0.68
TM4SF1-201ENST00000305366 EIF5BO60841 1220 aaKnown RBP10.81□□□□□ -0.68
TM4SF1-201ENST00000305366 R3HDM1Q15032 1099 aaKnown RBP10.81□□□□□ -0.68
TM4SF1-201ENST00000305366 EZH2Q15910 746 aaKnown RBP10.81□□□□□ -0.68
TM4SF1-201ENST00000305366 L3MBTL2Q969R5 705 aa10.81□□□□□ -0.68
TM4SF1-201ENST00000305366 CENPJQ9HC77 1338 aaPredicted RBP10.81□□□□□ -0.68
TM4SF1-201ENST00000305366 SOX12O15370 315 aa10.8□□□□□ -0.68
TM4SF1-201ENST00000305366 APBA3O96018 575 aa10.8□□□□□ -0.68
TM4SF1-201ENST00000305366 GCP02774 474 aa10.8□□□□□ -0.68
TM4SF1-201ENST00000305366 NLRP6P59044 892 aa10.8□□□□□ -0.68
TM4SF1-201ENST00000305366 NLRP13Q86W25 1043 aa10.8□□□□□ -0.68
TM4SF1-201ENST00000305366 MARF1Q9Y4F3 1742 aaKnown RBP10.79□□□□□ -0.68
TM4SF1-201ENST00000305366 ADGRB2O60241 1585 aa10.79□□□□□ -0.68
TM4SF1-201ENST00000305366 ATP7BP35670 1465 aa10.79□□□□□ -0.68
TM4SF1-201ENST00000305366 ANP32CO43423 234 aa10.79□□□□□ -0.68
TM4SF1-201ENST00000305366 FAM196AQ6ZSG2 479 aa10.79□□□□□ -0.68
TM4SF1-201ENST00000305366 SUPT16HQ9Y5B9 1047 aaKnown RBP10.79□□□□□ -0.68
TM4SF1-201ENST00000305366 TCP11L2Q8N4U5 519 aa10.77□□□□□ -0.68
TM4SF1-201ENST00000305366 PPIP5K1Q6PFW1 1433 aa10.77□□□□□ -0.69
TM4SF1-201ENST00000305366 POLR3AO14802 1390 aaPredicted RBP10.77□□□□□ -0.69
TM4SF1-201ENST00000305366 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.77□□□□□ -0.69
TM4SF1-201ENST00000305366 PLCH1Q4KWH8 1693 aa10.77□□□□□ -0.69
TM4SF1-201ENST00000305366 CAMKK2Q96RR4 588 aa10.75□□□□□ -0.69
TM4SF1-201ENST00000305366 TRPM3Q9HCF6 1732 aaPredicted RBP10.75□□□□□ -0.69
TM4SF1-201ENST00000305366 EVC2Q86UK5 1308 aa10.75□□□□□ -0.69
TM4SF1-201ENST00000305366 BARGINQ6ZT62 677 aa10.75□□□□□ -0.69
TM4SF1-201ENST00000305366 TOM1L2Q6ZVM7 507 aa10.75□□□□□ -0.69
TM4SF1-201ENST00000305366 SSH2Q76I76 1423 aa10.75□□□□□ -0.69
TM4SF1-201ENST00000305366 BRWD3Q6RI45 1802 aa10.74□□□□□ -0.69
TM4SF1-201ENST00000305366 CSB-PGBD3P0DP91 1061 aa10.74□□□□□ -0.69
TM4SF1-201ENST00000305366 COL14A1Q05707 1796 aaKnown RBP10.74□□□□□ -0.69
TM4SF1-201ENST00000305366 USP19O94966 1318 aa10.73□□□□□ -0.69
TM4SF1-201ENST00000305366 ALS2Q96Q42 1657 aa10.73□□□□□ -0.69
TM4SF1-201ENST00000305366 NWD2Q9ULI1 1742 aa10.73□□□□□ -0.69
TM4SF1-201ENST00000305366 ABCA3Q99758 1704 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms