RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 ANKRD26Q9UPS8 1709 aa7.82□□□□□ -1.16
TTC39C-201ENST00000304621 SENP3-EIF4A1A0A087X0R7 540 aa7.82□□□□□ -1.16
TTC39C-201ENST00000304621 FYB1O15117 783 aa7.82□□□□□ -1.16
TTC39C-201ENST00000304621 TNNT2P45379 298 aaPredicted RBP7.82□□□□□ -1.16
TTC39C-201ENST00000304621 HDGFL2Q7Z4V5 671 aaPredicted RBP7.82□□□□□ -1.16
TTC39C-201ENST00000304621 GGNBP2Q9H3C7 697 aa7.82□□□□□ -1.16
TTC39C-201ENST00000304621 ZRANB1Q9UGI0 708 aa7.82□□□□□ -1.16
TTC39C-201ENST00000304621 ADGRL3Q9HAR2 1447 aa7.82□□□□□ -1.16
TTC39C-201ENST00000304621 MORC1Q86VD1 984 aa7.81□□□□□ -1.16
TTC39C-201ENST00000304621 ACEP12821 1306 aa7.81□□□□□ -1.16
TTC39C-201ENST00000304621 CENPBP07199 599 aaPredicted RBP7.81□□□□□ -1.16
TTC39C-201ENST00000304621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.81□□□□□ -1.16
TTC39C-201ENST00000304621 ZNF219Q9P2Y4 722 aaPredicted RBP7.81□□□□□ -1.16
TTC39C-201ENST00000304621 EDC4Q6P2E9 1401 aaKnown RBP7.81□□□□□ -1.16
TTC39C-201ENST00000304621 NSD2O96028 1365 aa7.81□□□□□ -1.16
TTC39C-201ENST00000304621 PLEKHG3A1L390 1219 aa7.8□□□□□ -1.16
TTC39C-201ENST00000304621 HNRNPUQ00839 825 aaKnown RBP eCLIP7.8□□□□□ -1.16
TTC39C-201ENST00000304621 NME9Q86XW9 330 aa7.8□□□□□ -1.16
TTC39C-201ENST00000304621 PMFBP1Q8TBY8 1022 aa7.8□□□□□ -1.16
TTC39C-201ENST00000304621 SHPRHQ149N8 1683 aa7.8□□□□□ -1.16
TTC39C-201ENST00000304621 ANKARQ7Z5J8 1434 aa7.8□□□□□ -1.16
TTC39C-201ENST00000304621 FBLN1P23142 703 aa7.79□□□□□ -1.16
TTC39C-201ENST00000304621 PROSER2Q86WR7 435 aaPredicted RBP7.79□□□□□ -1.16
TTC39C-201ENST00000304621 USP6P35125 1406 aa7.79□□□□□ -1.16
TTC39C-201ENST00000304621 SSH2Q76I76 1423 aa7.79□□□□□ -1.16
TTC39C-201ENST00000304621 XIRP1Q702N8 1843 aaKnown RBP7.79□□□□□ -1.16
TTC39C-201ENST00000304621 PELP1Q8IZL8 1130 aaKnown RBP7.79□□□□□ -1.16
TTC39C-201ENST00000304621 POLR3AO14802 1390 aaPredicted RBP7.79□□□□□ -1.16
TTC39C-201ENST00000304621 MTHFSP49914 203 aa7.78□□□□□ -1.16
TTC39C-201ENST00000304621 TMEM94Q12767 1356 aa7.78□□□□□ -1.16
TTC39C-201ENST00000304621 TTC21BQ7Z4L5 1316 aa7.77□□□□□ -1.17
TTC39C-201ENST00000304621 ZNF335Q9H4Z2 1342 aaPredicted RBP7.77□□□□□ -1.17
TTC39C-201ENST00000304621 BLMP54132 1417 aaPredicted RBP7.77□□□□□ -1.17
TTC39C-201ENST00000304621 ADAMTS8Q9UP79 889 aa7.77□□□□□ -1.17
TTC39C-201ENST00000304621 COL3A1P02461 1466 aaPredicted RBP7.77□□□□□ -1.17
TTC39C-201ENST00000304621 MARF1Q9Y4F3 1742 aaKnown RBP7.77□□□□□ -1.17
TTC39C-201ENST00000304621 C14orf37Q86TY3 774 aa7.77□□□□□ -1.17
TTC39C-201ENST00000304621 ZNF692Q9BU19 519 aaPredicted RBP7.77□□□□□ -1.17
TTC39C-201ENST00000304621 PIK3C2AO00443 1686 aa7.76□□□□□ -1.17
TTC39C-201ENST00000304621 ORAI2Q96SN7 254 aa7.76□□□□□ -1.17
TTC39C-201ENST00000304621 OVOS2A0A0J9YW53 1432 aa7.76□□□□□ -1.17
TTC39C-201ENST00000304621 OVOS2Q6IE36 1432 aa7.76□□□□□ -1.17
TTC39C-201ENST00000304621 NGDNQ8NEJ9 315 aaKnown RBP7.75□□□□□ -1.17
TTC39C-201ENST00000304621 LRRC7Q96NW7 1537 aa7.75□□□□□ -1.17
TTC39C-201ENST00000304621 PHF8Q9UPP1 1060 aa7.75□□□□□ -1.17
TTC39C-201ENST00000304621 MST1RQ04912 1400 aa7.75□□□□□ -1.17
TTC39C-201ENST00000304621 ZBED9Q6R2W3 1325 aa7.75□□□□□ -1.17
TTC39C-201ENST00000304621 C1orf167Q5SNV9 1468 aa7.75□□□□□ -1.17
TTC39C-201ENST00000304621 POLKQ9UBT6 870 aa7.74□□□□□ -1.17
TTC39C-201ENST00000304621 ESCO1Q5FWF5 840 aa7.74□□□□□ -1.17
TTC39C-201ENST00000304621 CCDC146Q8IYE0 955 aa7.74□□□□□ -1.17
TTC39C-201ENST00000304621 C19orf44Q9H6X5 657 aa7.74□□□□□ -1.17
TTC39C-201ENST00000304621 ATF5Q9Y2D1 282 aaPredicted RBP7.74□□□□□ -1.17
TTC39C-201ENST00000304621 EMILIN1Q9Y6C2 1016 aa7.74□□□□□ -1.17
TTC39C-201ENST00000304621 INSRP06213 1382 aa7.73□□□□□ -1.17
TTC39C-201ENST00000304621 PEAK1Q9H792 1746 aa7.73□□□□□ -1.17
TTC39C-201ENST00000304621 SMG6Q86US8 1419 aaKnown RBP7.73□□□□□ -1.17
TTC39C-201ENST00000304621 COG3Q96JB2 828 aa7.73□□□□□ -1.17
TTC39C-201ENST00000304621 MAP2P11137 1827 aaKnown RBP7.73□□□□□ -1.17
TTC39C-201ENST00000304621 NCOA3Q9Y6Q9 1424 aa7.73□□□□□ -1.17
TTC39C-201ENST00000304621 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
TTC39C-201ENST00000304621 RRS1Q15050 365 aaKnown RBP7.73□□□□□ -1.17
TTC39C-201ENST00000304621 WDR43Q15061 677 aaKnown RBP eCLIP7.73□□□□□ -1.17
TTC39C-201ENST00000304621 NUTM2GQ5VZR2 741 aa7.73□□□□□ -1.17
TTC39C-201ENST00000304621 SALL2Q9Y467 1007 aaPredicted RBP7.73□□□□□ -1.17
TTC39C-201ENST00000304621 PNPLA6Q8IY17 1366 aa7.72□□□□□ -1.17
TTC39C-201ENST00000304621 USP54Q70EL1 1684 aa7.72□□□□□ -1.17
TTC39C-201ENST00000304621 TRPM3Q9HCF6 1732 aaPredicted RBP7.72□□□□□ -1.17
TTC39C-201ENST00000304621 DSG3P32926 999 aa7.72□□□□□ -1.17
TTC39C-201ENST00000304621 TTC21AQ8NDW8 1320 aa7.72□□□□□ -1.17
TTC39C-201ENST00000304621 AATKQ6ZMQ8 1374 aa7.72□□□□□ -1.17
TTC39C-201ENST00000304621 USP31Q70CQ4 1352 aa7.72□□□□□ -1.17
TTC39C-201ENST00000304621 DCCP43146 1447 aa7.72□□□□□ -1.17
TTC39C-201ENST00000304621 DDX17Q92841 729 aaKnown RBP7.72□□□□□ -1.17
TTC39C-201ENST00000304621 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
TTC39C-201ENST00000304621 FOXO3O43524 673 aa7.71□□□□□ -1.18
TTC39C-201ENST00000304621 KIF1AQ12756 1690 aa7.71□□□□□ -1.18
TTC39C-201ENST00000304621 SOX12O15370 315 aa7.7□□□□□ -1.18
TTC39C-201ENST00000304621 CFAP53Q96M91 514 aa7.7□□□□□ -1.18
TTC39C-201ENST00000304621 IQSEC2Q5JU85 1478 aa7.7□□□□□ -1.18
TTC39C-201ENST00000304621 CDK12Q9NYV4 1490 aaPredicted RBP7.7□□□□□ -1.18
TTC39C-201ENST00000304621 PAK3O75914 559 aaPredicted RBP7.7□□□□□ -1.18
TTC39C-201ENST00000304621 ATF3P18847 181 aa7.7□□□□□ -1.18
TTC39C-201ENST00000304621 RTN4Q9NQC3 1192 aaKnown RBP7.7□□□□□ -1.18
TTC39C-201ENST00000304621 MSH6P52701 1360 aa7.7□□□□□ -1.18
TTC39C-201ENST00000304621 APAF1O14727 1248 aa7.69□□□□□ -1.18
TTC39C-201ENST00000304621 GTF3C3Q9Y5Q9 886 aa7.69□□□□□ -1.18
TTC39C-201ENST00000304621 NLRP6P59044 892 aa7.69□□□□□ -1.18
TTC39C-201ENST00000304621 PSME1Q06323 249 aa7.69□□□□□ -1.18
TTC39C-201ENST00000304621 ABTB2Q8N961 1025 aa7.69□□□□□ -1.18
TTC39C-201ENST00000304621 ALS2Q96Q42 1657 aa7.68□□□□□ -1.18
TTC39C-201ENST00000304621 NFAT5O94916 1531 aa7.68□□□□□ -1.18
TTC39C-201ENST00000304621 MAP3K19Q56UN5 1328 aa7.68□□□□□ -1.18
TTC39C-201ENST00000304621 U2SURPO15042 1029 aaKnown RBP7.68□□□□□ -1.18
TTC39C-201ENST00000304621 DIAPH1O60610 1272 aaKnown RBP7.68□□□□□ -1.18
TTC39C-201ENST00000304621 U2AF1L5P0DN76 240 aaPredicted RBP7.68□□□□□ -1.18
TTC39C-201ENST00000304621 IL13P35225 146 aa7.68□□□□□ -1.18
TTC39C-201ENST00000304621 U2AF1Q01081 240 aaKnown RBP eCLIP7.68□□□□□ -1.18
TTC39C-201ENST00000304621 KRT28Q7Z3Y7 464 aa7.68□□□□□ -1.18
TTC39C-201ENST00000304621 CADPS2Q86UW7 1296 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms