RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 NSD3Q9BZ95 1437 aa17.33■□□□□ 0.36
KARS-201ENST00000302445 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
KARS-201ENST00000302445 SPRYD3Q8NCJ5 442 aa17.33■□□□□ 0.36
KARS-201ENST00000302445 CFAP53Q96M91 514 aa17.33■□□□□ 0.36
KARS-201ENST00000302445 MAP7D2Q96T17 732 aa17.33■□□□□ 0.36
KARS-201ENST00000302445 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.32■□□□□ 0.36
KARS-201ENST00000302445 ZSCAN30Q86W11 494 aa17.32■□□□□ 0.36
KARS-201ENST00000302445 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
KARS-201ENST00000302445 ABCC11Q96J66 1382 aa17.32■□□□□ 0.36
KARS-201ENST00000302445 ANP32BQ92688 251 aaKnown RBP17.31■□□□□ 0.36
KARS-201ENST00000302445 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
KARS-201ENST00000302445 OFD1O75665 1012 aa17.3■□□□□ 0.36
KARS-201ENST00000302445 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
KARS-201ENST00000302445 TNNQ9UQP3 1299 aa17.3■□□□□ 0.36
KARS-201ENST00000302445 HSP90AB1P08238 724 aaKnown RBP17.29■□□□□ 0.36
KARS-201ENST00000302445 GAS2L3Q86XJ1 694 aa17.29■□□□□ 0.36
KARS-201ENST00000302445 PPRC1Q5VV67 1664 aaKnown RBP17.29■□□□□ 0.36
KARS-201ENST00000302445 IL16Q14005 1332 aa17.29■□□□□ 0.36
KARS-201ENST00000302445 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
KARS-201ENST00000302445 KLHL40Q2TBA0 621 aa17.28■□□□□ 0.36
KARS-201ENST00000302445 BMP2KLQ5H9B9 411 aa17.28■□□□□ 0.36
KARS-201ENST00000302445 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
KARS-201ENST00000302445 NOS1P29475 1434 aa17.28■□□□□ 0.36
KARS-201ENST00000302445 FBLN2P98095 1184 aa17.27■□□□□ 0.36
KARS-201ENST00000302445 NUCB1Q02818 461 aa17.27■□□□□ 0.36
KARS-201ENST00000302445 KIAA1211Q6ZU35 1233 aa17.27■□□□□ 0.36
KARS-201ENST00000302445 NASPP49321 788 aaPredicted RBP17.26■□□□□ 0.35
KARS-201ENST00000302445 ATF7IPQ6VMQ6 1270 aa17.26■□□□□ 0.35
KARS-201ENST00000302445 MED14O60244 1454 aa17.26■□□□□ 0.35
KARS-201ENST00000302445 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
KARS-201ENST00000302445 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
KARS-201ENST00000302445 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
KARS-201ENST00000302445 FANCAO15360 1455 aa17.25■□□□□ 0.35
KARS-201ENST00000302445 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
KARS-201ENST00000302445 TRIM27P14373 513 aa17.25■□□□□ 0.35
KARS-201ENST00000302445 ZNF445P59923 1031 aa17.25■□□□□ 0.35
KARS-201ENST00000302445 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
KARS-201ENST00000302445 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
KARS-201ENST00000302445 MSNP26038 577 aaKnown RBP17.25■□□□□ 0.35
KARS-201ENST00000302445 MTERF4Q7Z6M4 381 aaKnown RBP17.25■□□□□ 0.35
KARS-201ENST00000302445 CHMP4BQ9H444 224 aaKnown RBP17.25■□□□□ 0.35
KARS-201ENST00000302445 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
KARS-201ENST00000302445 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
KARS-201ENST00000302445 ADGRB3O60242 1522 aa17.24■□□□□ 0.35
KARS-201ENST00000302445 EFCAB6Q5THR3 1501 aa17.24■□□□□ 0.35
KARS-201ENST00000302445 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
KARS-201ENST00000302445 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
KARS-201ENST00000302445 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
KARS-201ENST00000302445 IPO8O15397 1037 aaKnown RBP17.23■□□□□ 0.35
KARS-201ENST00000302445 MROH1Q8NDA8 1641 aa17.23■□□□□ 0.35
KARS-201ENST00000302445 PPLO60437 1756 aa17.22■□□□□ 0.35
KARS-201ENST00000302445 ZNF500O60304 480 aaPredicted RBP17.22■□□□□ 0.35
KARS-201ENST00000302445 CFAP70Q5T0N1 1121 aa17.22■□□□□ 0.35
KARS-201ENST00000302445 KIF2CQ99661 725 aa17.22■□□□□ 0.35
KARS-201ENST00000302445 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
KARS-201ENST00000302445 ZNF428Q96B54 188 aa17.21■□□□□ 0.35
KARS-201ENST00000302445 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
KARS-201ENST00000302445 LMTK2Q8IWU2 1503 aa17.21■□□□□ 0.35
KARS-201ENST00000302445 MCM5P33992 734 aa17.21■□□□□ 0.35
KARS-201ENST00000302445 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
KARS-201ENST00000302445 ALDH1L2Q3SY69 923 aa17.21■□□□□ 0.35
KARS-201ENST00000302445 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.35
KARS-201ENST00000302445 GCC1Q96CN9 775 aa17.21■□□□□ 0.35
KARS-201ENST00000302445 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
KARS-201ENST00000302445 ADGRB1O14514 1584 aa17.2■□□□□ 0.34
KARS-201ENST00000302445 MTHFSP49914 203 aa17.2■□□□□ 0.34
KARS-201ENST00000302445 SPAG9O60271 1321 aaKnown RBP17.19■□□□□ 0.34
KARS-201ENST00000302445 ZCCHC11Q5TAX3 1644 aaKnown RBP17.19■□□□□ 0.34
KARS-201ENST00000302445 PDLIM2Q96JY6 352 aa17.19■□□□□ 0.34
KARS-201ENST00000302445 NOL7Q9UMY1 257 aaKnown RBP17.19■□□□□ 0.34
KARS-201ENST00000302445 ANKRD36BQ8N2N9 1353 aa17.19■□□□□ 0.34
KARS-201ENST00000302445 NUCB2P80303 420 aa17.18■□□□□ 0.34
KARS-201ENST00000302445 SSH1Q8WYL5 1049 aa17.18■□□□□ 0.34
KARS-201ENST00000302445 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
KARS-201ENST00000302445 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
KARS-201ENST00000302445 ADGRF5Q8IZF2 1346 aa17.18■□□□□ 0.34
KARS-201ENST00000302445 CSPP1Q1MSJ5 1256 aa17.18■□□□□ 0.34
KARS-201ENST00000302445 CD109Q6YHK3 1445 aa17.17■□□□□ 0.34
KARS-201ENST00000302445 PIK3R4Q99570 1358 aa17.17■□□□□ 0.34
KARS-201ENST00000302445 BAG4O95429 457 aaKnown RBP17.17■□□□□ 0.34
KARS-201ENST00000302445 EXOSC9Q06265 439 aaKnown RBP17.17■□□□□ 0.34
KARS-201ENST00000302445 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
KARS-201ENST00000302445 UHRF1BP1LA0JNW5 1464 aa17.17■□□□□ 0.34
KARS-201ENST00000302445 CDC42BPGQ6DT37 1551 aa17.16■□□□□ 0.34
KARS-201ENST00000302445 TMEM57Q8N5G2 664 aa17.16■□□□□ 0.34
KARS-201ENST00000302445 RIPK4P57078 832 aa17.14■□□□□ 0.34
KARS-201ENST00000302445 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.34
KARS-201ENST00000302445 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.34
KARS-201ENST00000302445 ARHGEF28Q8N1W1 1705 aaKnown RBP17.14■□□□□ 0.34
KARS-201ENST00000302445 UGGT1Q9NYU2 1555 aa17.14■□□□□ 0.33
KARS-201ENST00000302445 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
KARS-201ENST00000302445 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
KARS-201ENST00000302445 RABEP1Q15276 862 aa17.14■□□□□ 0.33
KARS-201ENST00000302445 ABCA9Q8IUA7 1624 aa17.14■□□□□ 0.33
KARS-201ENST00000302445 DYNC1I1O14576 645 aa17.13■□□□□ 0.33
KARS-201ENST00000302445 CYP2E1P05181 493 aaPredicted RBP17.13■□□□□ 0.33
KARS-201ENST00000302445 SSFA2P28290 1259 aa17.13■□□□□ 0.33
KARS-201ENST00000302445 TMPOP42166 694 aaKnown RBP17.13■□□□□ 0.33
KARS-201ENST00000302445 PTCH1Q13635 1447 aa17.13■□□□□ 0.33
KARS-201ENST00000302445 LNPKQ9C0E8 428 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms