RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 RALGAPBQ86X10 1494 aa26.11■■□□□ 1.77
TMEM88-201ENST00000301599 ITSN1Q15811 1721 aa26.1■■□□□ 1.77
TMEM88-201ENST00000301599 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.09■■□□□ 1.77
TMEM88-201ENST00000301599 BTG4Q9NY30 223 aa26.09■■□□□ 1.77
TMEM88-201ENST00000301599 ALS2Q96Q42 1657 aa26.09■■□□□ 1.77
TMEM88-201ENST00000301599 ROCK2O75116 1388 aaKnown RBP26.07■■□□□ 1.76
TMEM88-201ENST00000301599 ONECUT3O60422 494 aaPredicted RBP26.07■■□□□ 1.76
TMEM88-201ENST00000301599 CCDC125Q86Z20 511 aa26.06■■□□□ 1.76
TMEM88-201ENST00000301599 NUTM2GQ5VZR2 741 aa26.05■■□□□ 1.76
TMEM88-201ENST00000301599 SEPT12Q8IYM1 358 aa26.05■■□□□ 1.76
TMEM88-201ENST00000301599 ABTB2Q8N961 1025 aa26.05■■□□□ 1.76
TMEM88-201ENST00000301599 PRDM11Q9NQV5 511 aa26.05■■□□□ 1.76
TMEM88-201ENST00000301599 EVC2Q86UK5 1308 aa26.05■■□□□ 1.76
TMEM88-201ENST00000301599 CABP1Q9NZU7 370 aa26.04■■□□□ 1.76
TMEM88-201ENST00000301599 ABCA3Q99758 1704 aa26.04■■□□□ 1.76
TMEM88-201ENST00000301599 PPIP5K1Q6PFW1 1433 aa26.04■■□□□ 1.76
TMEM88-201ENST00000301599 GLI3P10071 1580 aa26.03■■□□□ 1.76
TMEM88-201ENST00000301599 NWD2Q9ULI1 1742 aa26.03■■□□□ 1.76
TMEM88-201ENST00000301599 TRPM1Q7Z4N2 1603 aa26.01■■□□□ 1.75
TMEM88-201ENST00000301599 PLCH1Q4KWH8 1693 aa26■■□□□ 1.75
TMEM88-201ENST00000301599 ZC3H6P61129 1189 aaKnown RBP26■■□□□ 1.75
TMEM88-201ENST00000301599 NLRP13Q86W25 1043 aa26■■□□□ 1.75
TMEM88-201ENST00000301599 TOPAZ1Q8N9V7 1692 aa25.99■■□□□ 1.75
TMEM88-201ENST00000301599 BRD4O60885 1362 aaPredicted RBP25.99■■□□□ 1.75
TMEM88-201ENST00000301599 TONSLQ96HA7 1378 aa25.98■■□□□ 1.75
TMEM88-201ENST00000301599 COL14A1Q05707 1796 aaKnown RBP25.98■■□□□ 1.75
TMEM88-201ENST00000301599 KIAA0232Q92628 1395 aa25.97■■□□□ 1.75
TMEM88-201ENST00000301599 QRICH2Q9H0J4 1663 aa25.97■■□□□ 1.75
TMEM88-201ENST00000301599 CARD11Q9BXL7 1154 aa25.97■■□□□ 1.75
TMEM88-201ENST00000301599 A0A0G2JS52 829 aa25.96■■□□□ 1.75
TMEM88-201ENST00000301599 MYT1Q01538 1121 aa25.96■■□□□ 1.75
TMEM88-201ENST00000301599 CHRNA2Q15822 529 aa25.96■■□□□ 1.75
TMEM88-201ENST00000301599 FAM98CQ17RN3 349 aaKnown RBP25.96■■□□□ 1.75
TMEM88-201ENST00000301599 KRT27Q7Z3Y8 459 aa25.96■■□□□ 1.75
TMEM88-201ENST00000301599 SPATA31A5Q5VU36 1347 aa25.95■■□□□ 1.75
TMEM88-201ENST00000301599 SPATA31A7Q8IWB4 1347 aa25.95■■□□□ 1.75
TMEM88-201ENST00000301599 ZNF692Q9BU19 519 aaPredicted RBP25.95■■□□□ 1.74
TMEM88-201ENST00000301599 CRYBG1Q9Y4K1 1723 aa25.92■■□□□ 1.74
TMEM88-201ENST00000301599 GCP02774 474 aa25.92■■□□□ 1.74
TMEM88-201ENST00000301599 EVA1CP58658 441 aa25.92■■□□□ 1.74
TMEM88-201ENST00000301599 USP19O94966 1318 aa25.91■■□□□ 1.74
TMEM88-201ENST00000301599 NLRP6P59044 892 aa25.91■■□□□ 1.74
TMEM88-201ENST00000301599 STRN4Q9NRL3 753 aa25.91■■□□□ 1.74
TMEM88-201ENST00000301599 USP6P35125 1406 aa25.89■■□□□ 1.74
TMEM88-201ENST00000301599 NRAPQ86VF7 1730 aa25.89■■□□□ 1.74
TMEM88-201ENST00000301599 SF3B2Q13435 895 aaKnown RBP25.88■■□□□ 1.73
TMEM88-201ENST00000301599 SPATA31A1Q5TZJ5 1347 aa25.88■■□□□ 1.73
TMEM88-201ENST00000301599 CPDO75976 1380 aa25.87■■□□□ 1.73
TMEM88-201ENST00000301599 BLMP54132 1417 aaPredicted RBP25.87■■□□□ 1.73
TMEM88-201ENST00000301599 BRWD3Q6RI45 1802 aa25.86■■□□□ 1.73
TMEM88-201ENST00000301599 PHRF1Q9P1Y6 1649 aaKnown RBP25.85■■□□□ 1.73
TMEM88-201ENST00000301599 SBNO2Q9Y2G9 1366 aa25.84■■□□□ 1.73
TMEM88-201ENST00000301599 SSH2Q76I76 1423 aa25.84■■□□□ 1.73
TMEM88-201ENST00000301599 ZRANB1Q9UGI0 708 aa25.84■■□□□ 1.73
TMEM88-201ENST00000301599 TTC21BQ7Z4L5 1316 aa25.84■■□□□ 1.73
TMEM88-201ENST00000301599 EP400Q96L91 3159 aa25.82■■□□□ 1.72
TMEM88-201ENST00000301599 USP35Q9P2H5 1018 aa25.81■■□□□ 1.72
TMEM88-201ENST00000301599 ZBTB7CA1YPR0 619 aa25.8■■□□□ 1.72
TMEM88-201ENST00000301599 LARP1Q6PKG0 1096 aaKnown RBP25.8■■□□□ 1.72
TMEM88-201ENST00000301599 TTC21AQ8NDW8 1320 aa25.8■■□□□ 1.72
TMEM88-201ENST00000301599 NRKQ7Z2Y5 1582 aa25.79■■□□□ 1.72
TMEM88-201ENST00000301599 BARGINQ6ZT62 677 aa25.79■■□□□ 1.72
TMEM88-201ENST00000301599 KTN1Q86UP2 1357 aaKnown RBP25.79■■□□□ 1.72
TMEM88-201ENST00000301599 CAMTA1Q9Y6Y1 1673 aa25.78■■□□□ 1.72
TMEM88-201ENST00000301599 DEFB132Q7Z7B7 95 aa25.78■■□□□ 1.72
TMEM88-201ENST00000301599 KCNH5Q8NCM2 988 aa25.78■■□□□ 1.72
TMEM88-201ENST00000301599 PUS7Q96PZ0 661 aaKnown RBP25.78■■□□□ 1.72
TMEM88-201ENST00000301599 CPSF1Q10570 1443 aaKnown RBP25.78■■□□□ 1.72
TMEM88-201ENST00000301599 SLC24A1O60721 1099 aa25.77■■□□□ 1.72
TMEM88-201ENST00000301599 TCP11L2Q8N4U5 519 aa25.77■■□□□ 1.72
TMEM88-201ENST00000301599 TMC1Q8TDI8 760 aa25.77■■□□□ 1.72
TMEM88-201ENST00000301599 FAM182BQ5T319 152 aa25.76■■□□□ 1.71
TMEM88-201ENST00000301599 THRAP3Q9Y2W1 955 aaKnown RBP25.76■■□□□ 1.71
TMEM88-201ENST00000301599 AATKQ6ZMQ8 1374 aa25.76■■□□□ 1.71
TMEM88-201ENST00000301599 BAG6P46379 1132 aa25.74■■□□□ 1.71
TMEM88-201ENST00000301599 HDGFL2Q7Z4V5 671 aaPredicted RBP25.74■■□□□ 1.71
TMEM88-201ENST00000301599 ST20-MTHFSA0A0A6YYL1 179 aa25.73■■□□□ 1.71
TMEM88-201ENST00000301599 PDE3BQ13370 1112 aa25.73■■□□□ 1.71
TMEM88-201ENST00000301599 SLC12A5Q9H2X9 1139 aa25.73■■□□□ 1.71
TMEM88-201ENST00000301599 FAM196AQ6ZSG2 479 aa25.72■■□□□ 1.71
TMEM88-201ENST00000301599 ARHGEF25Q86VW2 580 aa25.72■■□□□ 1.71
TMEM88-201ENST00000301599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.72■■□□□ 1.71
TMEM88-201ENST00000301599 SLIT3O75094 1523 aa25.72■■□□□ 1.71
TMEM88-201ENST00000301599 TERF2IPQ9NYB0 399 aa25.71■■□□□ 1.71
TMEM88-201ENST00000301599 LMO7Q8WWI1 1683 aa25.71■■□□□ 1.71
TMEM88-201ENST00000301599 THSD7AQ9UPZ6 1657 aa25.71■■□□□ 1.71
TMEM88-201ENST00000301599 SOX12O15370 315 aa25.69■■□□□ 1.7
TMEM88-201ENST00000301599 TESK2Q96S53 571 aa25.69■■□□□ 1.7
TMEM88-201ENST00000301599 AXIN2Q9Y2T1 843 aa25.69■■□□□ 1.7
TMEM88-201ENST00000301599 PIK3C2AO00443 1686 aa25.68■■□□□ 1.7
TMEM88-201ENST00000301599 COL5A2P05997 1499 aaPredicted RBP25.68■■□□□ 1.7
TMEM88-201ENST00000301599 TIMELESSQ9UNS1 1208 aa25.68■■□□□ 1.7
TMEM88-201ENST00000301599 AKAP12Q02952 1782 aa25.68■■□□□ 1.7
TMEM88-201ENST00000301599 CRB1P82279 1406 aa25.67■■□□□ 1.7
TMEM88-201ENST00000301599 TOM1L2Q6ZVM7 507 aa25.67■■□□□ 1.7
TMEM88-201ENST00000301599 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
TMEM88-201ENST00000301599 USP31Q70CQ4 1352 aa25.65■■□□□ 1.7
TMEM88-201ENST00000301599 TRIM37O94972 964 aa25.64■■□□□ 1.7
TMEM88-201ENST00000301599 EN1Q05925 392 aaPredicted RBP25.64■■□□□ 1.7
TMEM88-201ENST00000301599 NME9Q86XW9 330 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms