RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 PMFBP1Q8TBY8 1022 aa33.91■■■■□ 3.02
SDCCAG3-201ENST00000298537 U2AF1L5P0DN76 240 aaPredicted RBP33.9■■■■□ 3.02
SDCCAG3-201ENST00000298537 U2AF1Q01081 240 aaKnown RBP eCLIP33.9■■■■□ 3.025e-8■□□□□ 8.6
SDCCAG3-201ENST00000298537 TOPAZ1Q8N9V7 1692 aa33.9■■■■□ 3.02
SDCCAG3-201ENST00000298537 AKAP12Q02952 1782 aa33.9■■■■□ 3.02
SDCCAG3-201ENST00000298537 RCAN3Q9UKA8 241 aa33.9■■■■□ 3.02
SDCCAG3-201ENST00000298537 PPM1GO15355 546 aaPredicted RBP33.89■■■■□ 3.02
SDCCAG3-201ENST00000298537 NEUROD2Q15784 382 aa33.89■■■■□ 3.02
SDCCAG3-201ENST00000298537 POLKQ9UBT6 870 aa33.88■■■■□ 3.01
SDCCAG3-201ENST00000298537 ITSN1Q15811 1721 aa33.88■■■■□ 3.01
SDCCAG3-201ENST00000298537 PLEKHG3A1L390 1219 aa33.86■■■■□ 3.01
SDCCAG3-201ENST00000298537 U2SURPO15042 1029 aaKnown RBP33.86■■■■□ 3.01
SDCCAG3-201ENST00000298537 DUSP27Q5VZP5 1158 aa33.86■■■■□ 3.01
SDCCAG3-201ENST00000298537 GOLGA2Q08379 1002 aa33.86■■■■□ 3.01
SDCCAG3-201ENST00000298537 RUNDC1Q96C34 613 aa33.86■■■■□ 3.01
SDCCAG3-201ENST00000298537 EMILIN1Q9Y6C2 1016 aa33.86■■■■□ 3.01
SDCCAG3-201ENST00000298537 PIK3R4Q99570 1358 aa33.85■■■■□ 3.01
SDCCAG3-201ENST00000298537 TCP11L2Q8N4U5 519 aa33.85■■■■□ 3.01
SDCCAG3-201ENST00000298537 RGPD8O14715 1765 aaPredicted RBP33.84■■■■□ 3.01
SDCCAG3-201ENST00000298537 ZNF692Q9BU19 519 aaPredicted RBP33.84■■■■□ 3.01
SDCCAG3-201ENST00000298537 TTC21BQ7Z4L5 1316 aa33.82■■■■□ 3
SDCCAG3-201ENST00000298537 PNPLA6Q8IY17 1366 aa33.81■■■■□ 3
SDCCAG3-201ENST00000298537 SLFN5Q08AF3 891 aa33.81■■■■□ 3
SDCCAG3-201ENST00000298537 IQSEC2Q5JU85 1478 aa33.81■■■■□ 3
SDCCAG3-201ENST00000298537 CHD2O14647 1828 aaKnown RBP33.81■■■■□ 3
SDCCAG3-201ENST00000298537 RRS1Q15050 365 aaKnown RBP33.8■■■■□ 3
SDCCAG3-201ENST00000298537 COG3Q96JB2 828 aa33.8■■■■□ 3
SDCCAG3-201ENST00000298537 NPHP4O75161 1426 aaPredicted RBP33.8■■■■□ 3
SDCCAG3-201ENST00000298537 USP6P35125 1406 aa33.79■■■■□ 3
SDCCAG3-201ENST00000298537 RRP1P56182 461 aaKnown RBP33.79■■■■□ 3
SDCCAG3-201ENST00000298537 WWC1Q8IX03 1113 aa33.79■■■■□ 3
SDCCAG3-201ENST00000298537 MAP2P11137 1827 aaKnown RBP33.78■■■■□ 3
SDCCAG3-201ENST00000298537 NRKQ7Z2Y5 1582 aa33.78■■■■□ 3
SDCCAG3-201ENST00000298537 DIAPH1O60610 1272 aaKnown RBP33.78■■■■□ 3
SDCCAG3-201ENST00000298537 PLIN1O60240 522 aa33.75■■■□□ 2.99
SDCCAG3-201ENST00000298537 B4GALNT3Q6L9W6 998 aa33.75■■■□□ 2.99
SDCCAG3-201ENST00000298537 PPP4R2Q9NY27 417 aa33.74■■■□□ 2.99
SDCCAG3-201ENST00000298537 TRMT2AQ8IZ69 625 aaKnown RBP33.74■■■□□ 2.99
SDCCAG3-201ENST00000298537 PLEKHF1Q96S99 279 aa33.74■■■□□ 2.99
SDCCAG3-201ENST00000298537 ERICH6BQ5W0A0 696 aa33.73■■■□□ 2.99
SDCCAG3-201ENST00000298537 NGDNQ8NEJ9 315 aaKnown RBP33.73■■■□□ 2.99
SDCCAG3-201ENST00000298537 NALCNQ8IZF0 1738 aa33.72■■■□□ 2.99
SDCCAG3-201ENST00000298537 SSH2Q76I76 1423 aa33.71■■■□□ 2.99
SDCCAG3-201ENST00000298537 SOX12O15370 315 aa33.69■■■□□ 2.98
SDCCAG3-201ENST00000298537 PHF23Q9BUL5 403 aaPredicted RBP33.68■■■□□ 2.98
SDCCAG3-201ENST00000298537 AATKQ6ZMQ8 1374 aa33.68■■■□□ 2.98
SDCCAG3-201ENST00000298537 FMN2Q9NZ56 1722 aa33.67■■■□□ 2.98
SDCCAG3-201ENST00000298537 OVOS2A0A0J9YW53 1432 aa33.67■■■□□ 2.98
SDCCAG3-201ENST00000298537 OVOS2Q6IE36 1432 aa33.67■■■□□ 2.98
SDCCAG3-201ENST00000298537 E9PSI1 815 aa33.65■■■□□ 2.98
SDCCAG3-201ENST00000298537 HMOX1P09601 288 aa33.64■■■□□ 2.98
SDCCAG3-201ENST00000298537 NGEFQ8N5V2 710 aa33.64■■■□□ 2.98
SDCCAG3-201ENST00000298537 IL13P35225 146 aa33.63■■■□□ 2.97
SDCCAG3-201ENST00000298537 ANKARQ7Z5J8 1434 aa33.63■■■□□ 2.97
SDCCAG3-201ENST00000298537 HSPA2P54652 639 aa33.62■■■□□ 2.97
SDCCAG3-201ENST00000298537 EXOC6Q8TAG9 804 aa33.62■■■□□ 2.97
SDCCAG3-201ENST00000298537 CDK12Q9NYV4 1490 aaPredicted RBP33.6■■■□□ 2.97
SDCCAG3-201ENST00000298537 TMPOP42166 694 aaKnown RBP33.6■■■□□ 2.97
SDCCAG3-201ENST00000298537 NUTM2GQ5VZR2 741 aa33.59■■■□□ 2.97
SDCCAG3-201ENST00000298537 LRRC7Q96NW7 1537 aa33.59■■■□□ 2.97
SDCCAG3-201ENST00000298537 RSPH6AQ9H0K4 717 aa33.59■■■□□ 2.97
SDCCAG3-201ENST00000298537 PRKAR2BP31323 418 aa33.58■■■□□ 2.97
SDCCAG3-201ENST00000298537 C20orf194Q5TEA3 1177 aa33.58■■■□□ 2.97
SDCCAG3-201ENST00000298537 C14orf37Q86TY3 774 aa33.58■■■□□ 2.97
SDCCAG3-201ENST00000298537 ADGRL3Q9HAR2 1447 aa33.58■■■□□ 2.97
SDCCAG3-201ENST00000298537 MAPK8IP3Q9UPT6 1336 aa33.57■■■□□ 2.96
SDCCAG3-201ENST00000298537 TRIM35Q9UPQ4 493 aa33.57■■■□□ 2.96
SDCCAG3-201ENST00000298537 CCDC27Q2M243 656 aa33.56■■■□□ 2.96
SDCCAG3-201ENST00000298537 PHACTR3Q96KR7 559 aa33.55■■■□□ 2.96
SDCCAG3-201ENST00000298537 TTC21AQ8NDW8 1320 aa33.55■■■□□ 2.96
SDCCAG3-201ENST00000298537 KDM4FA0A1W2PPD8 638 aa33.54■■■□□ 2.96
SDCCAG3-201ENST00000298537 USP31Q70CQ4 1352 aa33.54■■■□□ 2.96
SDCCAG3-201ENST00000298537 FCHSD2O94868 740 aa33.53■■■□□ 2.96
SDCCAG3-201ENST00000298537 PHF8Q9UPP1 1060 aa33.53■■■□□ 2.96
SDCCAG3-201ENST00000298537 PIK3C2AO00443 1686 aa33.53■■■□□ 2.96
SDCCAG3-201ENST00000298537 WDR63Q8IWG1 891 aa33.53■■■□□ 2.96
SDCCAG3-201ENST00000298537 BCAR3O75815 825 aa33.52■■■□□ 2.96
SDCCAG3-201ENST00000298537 PEAK1Q9H792 1746 aa33.52■■■□□ 2.96
SDCCAG3-201ENST00000298537 HSP90AB2PQ58FF8 381 aa33.52■■■□□ 2.96
SDCCAG3-201ENST00000298537 PAK3O75914 559 aaPredicted RBP33.51■■■□□ 2.96
SDCCAG3-201ENST00000298537 RIPK4P57078 832 aa33.51■■■□□ 2.95
SDCCAG3-201ENST00000298537 ESCO1Q5FWF5 840 aa33.51■■■□□ 2.95
SDCCAG3-201ENST00000298537 EIF4A2Q14240 407 aaKnown RBP33.5■■■□□ 2.95
SDCCAG3-201ENST00000298537 PROSER2Q86WR7 435 aaPredicted RBP33.5■■■□□ 2.95
SDCCAG3-201ENST00000298537 NLRP6P59044 892 aa33.49■■■□□ 2.95
SDCCAG3-201ENST00000298537 NWD1Q149M9 1564 aa33.49■■■□□ 2.95
SDCCAG3-201ENST00000298537 ORAI2Q96SN7 254 aa33.48■■■□□ 2.95
SDCCAG3-201ENST00000298537 MAP3K19Q56UN5 1328 aa33.48■■■□□ 2.95
SDCCAG3-201ENST00000298537 CRBNQ96SW2 442 aa33.47■■■□□ 2.95
SDCCAG3-201ENST00000298537 AEBP1Q8IUX7 1158 aa33.46■■■□□ 2.95
SDCCAG3-201ENST00000298537 TSR2Q969E8 191 aaKnown RBP33.46■■■□□ 2.95
SDCCAG3-201ENST00000298537 CCDC136Q96JN2 1154 aa33.45■■■□□ 2.95
SDCCAG3-201ENST00000298537 TSHZ2Q9NRE2 1034 aa33.45■■■□□ 2.95
SDCCAG3-201ENST00000298537 ABTB2Q8N961 1025 aa33.45■■■□□ 2.94
SDCCAG3-201ENST00000298537 NCBP3Q53F19 620 aaKnown RBP33.43■■■□□ 2.94
SDCCAG3-201ENST00000298537 XPCQ01831 940 aaPredicted RBP33.42■■■□□ 2.94
SDCCAG3-201ENST00000298537 PNNQ9H307 717 aaKnown RBP33.41■■■□□ 2.94
SDCCAG3-201ENST00000298537 MARF1Q9Y4F3 1742 aaKnown RBP33.41■■■□□ 2.94
SDCCAG3-201ENST00000298537 THUMPD2Q9BTF0 503 aaKnown RBP33.4■■■□□ 2.94
SDCCAG3-201ENST00000298537 STRCP1A6NGW2 1772 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms