RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 ACEP12821 1306 aa28.31■■■□□ 2.12
SOX17-201ENST00000297316 ERICH6BQ5W0A0 696 aa28.3■■■□□ 2.12
SOX17-201ENST00000297316 PMFBP1Q8TBY8 1022 aa28.28■■■□□ 2.12
SOX17-201ENST00000297316 CFAP53Q96M91 514 aa28.27■■■□□ 2.12
SOX17-201ENST00000297316 PLEKHG3A1L390 1219 aa28.26■■■□□ 2.12
SOX17-201ENST00000297316 NALCNQ8IZF0 1738 aa28.26■■■□□ 2.12
SOX17-201ENST00000297316 TSHZ2Q9NRE2 1034 aa28.26■■■□□ 2.11
SOX17-201ENST00000297316 APAF1O14727 1248 aa28.25■■■□□ 2.11
SOX17-201ENST00000297316 ZNF692Q9BU19 519 aaPredicted RBP28.25■■■□□ 2.11
SOX17-201ENST00000297316 MAP2P11137 1827 aaKnown RBP28.25■■■□□ 2.11
SOX17-201ENST00000297316 PPP4R2Q9NY27 417 aa28.24■■■□□ 2.11
SOX17-201ENST00000297316 NRKQ7Z2Y5 1582 aa28.23■■■□□ 2.11
SOX17-201ENST00000297316 ZNF521Q96K83 1311 aa28.22■■■□□ 2.11
SOX17-201ENST00000297316 FMN2Q9NZ56 1722 aa28.22■■■□□ 2.11
SOX17-201ENST00000297316 KDM4FA0A1W2PPD8 638 aa28.21■■■□□ 2.11
SOX17-201ENST00000297316 COL3A1P02461 1466 aaPredicted RBP28.21■■■□□ 2.11
SOX17-201ENST00000297316 TTC21BQ7Z4L5 1316 aa28.2■■■□□ 2.1
SOX17-201ENST00000297316 USP6P35125 1406 aa28.2■■■□□ 2.1
SOX17-201ENST00000297316 HSPA2P54652 639 aa28.2■■■□□ 2.1
SOX17-201ENST00000297316 RCAN3Q9UKA8 241 aa28.2■■■□□ 2.1
SOX17-201ENST00000297316 PPM1GO15355 546 aaPredicted RBP28.19■■■□□ 2.1
SOX17-201ENST00000297316 POLKQ9UBT6 870 aa28.19■■■□□ 2.1
SOX17-201ENST00000297316 U2AF1L5P0DN76 240 aaPredicted RBP28.17■■■□□ 2.1
SOX17-201ENST00000297316 U2AF1Q01081 240 aaKnown RBP eCLIP28.17■■■□□ 2.1
SOX17-201ENST00000297316 COG3Q96JB2 828 aa28.17■■■□□ 2.1
SOX17-201ENST00000297316 EMILIN1Q9Y6C2 1016 aa28.17■■■□□ 2.1
SOX17-201ENST00000297316 NGDNQ8NEJ9 315 aaKnown RBP28.16■■■□□ 2.1
SOX17-201ENST00000297316 B4GALNT3Q6L9W6 998 aa28.15■■■□□ 2.1
SOX17-201ENST00000297316 RRP1P56182 461 aaKnown RBP28.15■■■□□ 2.1
SOX17-201ENST00000297316 U2SURPO15042 1029 aaKnown RBP28.14■■■□□ 2.1
SOX17-201ENST00000297316 PNPLA6Q8IY17 1366 aa28.13■■■□□ 2.09
SOX17-201ENST00000297316 SSH2Q76I76 1423 aa28.13■■■□□ 2.09
SOX17-201ENST00000297316 ANKARQ7Z5J8 1434 aa28.13■■■□□ 2.09
SOX17-201ENST00000297316 RRS1Q15050 365 aaKnown RBP28.13■■■□□ 2.09
SOX17-201ENST00000297316 RRP7AQ9Y3A4 280 aaKnown RBP28.13■■■□□ 2.09
SOX17-201ENST00000297316 RUNDC1Q96C34 613 aa28.12■■■□□ 2.09
SOX17-201ENST00000297316 NEUROD2Q15784 382 aa28.11■■■□□ 2.09
SOX17-201ENST00000297316 ADGRL3Q9HAR2 1447 aa28.11■■■□□ 2.09
SOX17-201ENST00000297316 NWD1Q149M9 1564 aa28.11■■■□□ 2.09
SOX17-201ENST00000297316 DUSP27Q5VZP5 1158 aa28.1■■■□□ 2.09
SOX17-201ENST00000297316 C14orf37Q86TY3 774 aa28.1■■■□□ 2.09
SOX17-201ENST00000297316 DMRT2Q9Y5R5 561 aa28.1■■■□□ 2.09
SOX17-201ENST00000297316 DIAPH1O60610 1272 aaKnown RBP28.09■■■□□ 2.09
SOX17-201ENST00000297316 TCP11L2Q8N4U5 519 aa28.09■■■□□ 2.09
SOX17-201ENST00000297316 GOLGA2Q08379 1002 aa28.09■■■□□ 2.09
SOX17-201ENST00000297316 SPINK5Q9NQ38 1064 aaPredicted RBP28.08■■■□□ 2.09
SOX17-201ENST00000297316 IQSEC2Q5JU85 1478 aa28.08■■■□□ 2.09
SOX17-201ENST00000297316 OVOS2A0A0J9YW53 1432 aa28.08■■■□□ 2.09
SOX17-201ENST00000297316 OVOS2Q6IE36 1432 aa28.08■■■□□ 2.09
SOX17-201ENST00000297316 AATKQ6ZMQ8 1374 aa28.07■■■□□ 2.08
SOX17-201ENST00000297316 PROSER2Q86WR7 435 aaPredicted RBP28.06■■■□□ 2.08
SOX17-201ENST00000297316 SOX12O15370 315 aa28.06■■■□□ 2.08
SOX17-201ENST00000297316 SLFN5Q08AF3 891 aa28.06■■■□□ 2.08
SOX17-201ENST00000297316 STRCP1A6NGW2 1772 aa28.05■■■□□ 2.08
SOX17-201ENST00000297316 PIK3C2AO00443 1686 aa28.03■■■□□ 2.08
SOX17-201ENST00000297316 WWC1Q8IX03 1113 aa28.03■■■□□ 2.08
SOX17-201ENST00000297316 TRMT2AQ8IZ69 625 aaKnown RBP28.02■■■□□ 2.08
SOX17-201ENST00000297316 PLEKHF1Q96S99 279 aa28.02■■■□□ 2.08
SOX17-201ENST00000297316 PHF8Q9UPP1 1060 aa28.02■■■□□ 2.08
SOX17-201ENST00000297316 TTC21AQ8NDW8 1320 aa28.02■■■□□ 2.08
SOX17-201ENST00000297316 CDK12Q9NYV4 1490 aaPredicted RBP28.02■■■□□ 2.08
SOX17-201ENST00000297316 LMTK3Q96Q04 1460 aa28.01■■■□□ 2.07
SOX17-201ENST00000297316 PLIN1O60240 522 aa28.01■■■□□ 2.07
SOX17-201ENST00000297316 NUTM2GQ5VZR2 741 aa28.01■■■□□ 2.07
SOX17-201ENST00000297316 ESCO1Q5FWF5 840 aa28■■■□□ 2.07
SOX17-201ENST00000297316 EXOC6Q8TAG9 804 aa27.98■■■□□ 2.07
SOX17-201ENST00000297316 IL13P35225 146 aa27.97■■■□□ 2.07
SOX17-201ENST00000297316 PAK3O75914 559 aaPredicted RBP27.97■■■□□ 2.07
SOX17-201ENST00000297316 USP31Q70CQ4 1352 aa27.97■■■□□ 2.07
SOX17-201ENST00000297316 ORAI2Q96SN7 254 aa27.97■■■□□ 2.07
SOX17-201ENST00000297316 PEAK1Q9H792 1746 aa27.97■■■□□ 2.07
SOX17-201ENST00000297316 HMOX1P09601 288 aa27.96■■■□□ 2.07
SOX17-201ENST00000297316 NGEFQ8N5V2 710 aa27.96■■■□□ 2.07
SOX17-201ENST00000297316 LRRC7Q96NW7 1537 aa27.95■■■□□ 2.07
SOX17-201ENST00000297316 STRCQ7RTU9 1775 aa27.95■■■□□ 2.07
SOX17-201ENST00000297316 MARF1Q9Y4F3 1742 aaKnown RBP27.95■■■□□ 2.07
SOX17-201ENST00000297316 PHF23Q9BUL5 403 aaPredicted RBP27.95■■■□□ 2.06
SOX17-201ENST00000297316 NLRP6P59044 892 aa27.94■■■□□ 2.06
SOX17-201ENST00000297316 RSPH6AQ9H0K4 717 aa27.93■■■□□ 2.06
SOX17-201ENST00000297316 E9PSI1 815 aa27.92■■■□□ 2.06
SOX17-201ENST00000297316 CCDC136Q96JN2 1154 aa27.92■■■□□ 2.06
SOX17-201ENST00000297316 TMEM94Q12767 1356 aa27.92■■■□□ 2.06
SOX17-201ENST00000297316 MAPK8IP3Q9UPT6 1336 aa27.92■■■□□ 2.06
SOX17-201ENST00000297316 PRKAR2BP31323 418 aa27.91■■■□□ 2.06
SOX17-201ENST00000297316 ABTB2Q8N961 1025 aa27.91■■■□□ 2.06
SOX17-201ENST00000297316 TMPOP42166 694 aaKnown RBP27.91■■■□□ 2.06
SOX17-201ENST00000297316 HSP90AB2PQ58FF8 381 aa27.9■■■□□ 2.06
SOX17-201ENST00000297316 MAP3K19Q56UN5 1328 aa27.9■■■□□ 2.06
SOX17-201ENST00000297316 FCHSD2O94868 740 aa27.9■■■□□ 2.06
SOX17-201ENST00000297316 XPCQ01831 940 aaPredicted RBP27.9■■■□□ 2.06
SOX17-201ENST00000297316 C19orf44Q9H6X5 657 aa27.9■■■□□ 2.06
SOX17-201ENST00000297316 FOXO3O43524 673 aa27.88■■■□□ 2.05
SOX17-201ENST00000297316 PSME1Q06323 249 aa27.88■■■□□ 2.05
SOX17-201ENST00000297316 EIF4A2Q14240 407 aaKnown RBP27.88■■■□□ 2.05
SOX17-201ENST00000297316 CCDC27Q2M243 656 aa27.88■■■□□ 2.05
SOX17-201ENST00000297316 C20orf194Q5TEA3 1177 aa27.88■■■□□ 2.05
SOX17-201ENST00000297316 PHACTR3Q96KR7 559 aa27.87■■■□□ 2.05
SOX17-201ENST00000297316 TRIM35Q9UPQ4 493 aa27.86■■■□□ 2.05
SOX17-201ENST00000297316 CRBNQ96SW2 442 aa27.84■■■□□ 2.05
SOX17-201ENST00000297316 C1orf167Q5SNV9 1468 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms