RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 SASS6Q6UVJ0 657 aa19.38■□□□□ 0.69
ARHGEF28-201ENST00000296794 MBD3O95983 291 aa19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 TPD52L1Q16890 204 aaPredicted RBP19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 RBM33Q96EV2 1170 aaKnown RBP19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 AIMP1Q12904 312 aaKnown RBP19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 SKAP1Q86WV1 359 aa19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 CPLX1O14810 134 aa19.37■□□□□ 0.69
ARHGEF28-201ENST00000296794 RPGRIP1LQ68CZ1 1315 aa19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 PES1O00541 588 aaKnown RBP19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 GNAI3P08754 354 aa19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 C20orf194Q5TEA3 1177 aa19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 ANO8Q9HCE9 1232 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF28-201ENST00000296794 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 NCOA1Q15788 1441 aa19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 APPP05067 770 aa19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 WWC1Q8IX03 1113 aa19.35■□□□□ 0.69
ARHGEF28-201ENST00000296794 CCDC173Q0VFZ6 552 aa19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 IFT57Q9NWB7 429 aa19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 K7ELQ4 463 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 MCM2P49736 904 aa19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 ZNF771Q7L3S4 317 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 CABP1Q9NZU7 370 aa19.34■□□□□ 0.69
ARHGEF28-201ENST00000296794 MCM4P33991 863 aa19.33■□□□□ 0.69
ARHGEF28-201ENST00000296794 FBXW7Q969H0 707 aa19.33■□□□□ 0.69
ARHGEF28-201ENST00000296794 SURF6O75683 361 aaKnown RBP19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 TRIM29Q14134 588 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 CCDC73Q6ZRK6 1079 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 CHD1LQ86WJ1 897 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 CNTROBQ8N137 903 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 FOSBP53539 338 aa19.33■□□□□ 0.68
ARHGEF28-201ENST00000296794 GRPEL1Q9HAV7 217 aa19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 CTDP1Q9Y5B0 961 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 HOMER1Q86YM7 354 aa19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 NUTM2BA6NNL0 878 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 NUTM2EB1AL46 878 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 NUTM2AQ8IVF1 878 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF28-201ENST00000296794 TPM1P09493 284 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 TOM1L2Q6ZVM7 507 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 PRDM11Q9NQV5 511 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 CD109Q6YHK3 1445 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 PTPN23Q9H3S7 1636 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 RAD21O60216 631 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 TSR1Q2NL82 804 aaKnown RBP19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 CCDC30Q5VVM6 783 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 TSPY26PQ9H489 355 aa19.31■□□□□ 0.68
ARHGEF28-201ENST00000296794 TRDNQ13061 729 aa19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 RBM42Q9BTD8 480 aaKnown RBP19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 SF3B2Q13435 895 aaKnown RBP19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 CLASRPQ8N2M8 674 aaKnown RBP19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
ARHGEF28-201ENST00000296794 TPM2P07951 284 aa19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 RTEL1-TNFRSF6BF6WH68 1400 aa19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 CWC22Q9HCG8 908 aaKnown RBP19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 ABCC5O15440 1437 aa19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 GNAI2P04899 355 aa19.29■□□□□ 0.68
ARHGEF28-201ENST00000296794 SLC4A2P04920 1241 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 PSMA5P28066 241 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 NEUROD6Q96NK8 337 aa19.28■□□□□ 0.68
ARHGEF28-201ENST00000296794 LETM1O95202 739 aaPredicted RBP19.27■□□□□ 0.68
ARHGEF28-201ENST00000296794 CIZ1Q9ULV3 898 aaPredicted RBP19.27■□□□□ 0.68
ARHGEF28-201ENST00000296794 FSD1Q9BTV5 496 aa19.27■□□□□ 0.68
ARHGEF28-201ENST00000296794 GPS2Q13227 327 aa19.26■□□□□ 0.67
ARHGEF28-201ENST00000296794 MAP7D2Q96T17 732 aa19.26■□□□□ 0.67
ARHGEF28-201ENST00000296794 FIBPO43427 364 aa19.26■□□□□ 0.67
ARHGEF28-201ENST00000296794 NSD3Q9BZ95 1437 aa19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 SULT6B1Q6IMI4 303 aa19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 TMEM57Q8N5G2 664 aa19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 DHX16O60231 1041 aaKnown RBP19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 PIP4K2BP78356 416 aa19.25■□□□□ 0.67
ARHGEF28-201ENST00000296794 MTERF4Q7Z6M4 381 aaKnown RBP19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 DDX54Q8TDD1 881 aaKnown RBP19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 HOOK1Q9UJC3 728 aaKnown RBP19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 RPRD2Q5VT52 1461 aaKnown RBP19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 KIF6Q6ZMV9 814 aa19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 NFXL1Q6ZNB6 911 aa19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 CCDC61Q9Y6R9 512 aa19.24■□□□□ 0.67
ARHGEF28-201ENST00000296794 RARSP54136 660 aaKnown RBP19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 ZNF530Q6P9A1 599 aaPredicted RBP19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 CAMSAP2Q08AD1 1489 aa19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 SPG7Q9UQ90 795 aa19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 TMPOP42166 694 aaKnown RBP19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 TRIM5Q9C035 493 aa19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 CCT4P50991 539 aaKnown RBP19.23■□□□□ 0.67
ARHGEF28-201ENST00000296794 LRRCC1Q9C099 1032 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 TCEAL9Q9UHQ7 104 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 NKTRP30414 1462 aaKnown RBP19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 FAM177BA6PVY3 158 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 SDF4Q9BRK5 362 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 CABP4P57796 275 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 PDCP20941 246 aa19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 RALYLQ86SE5 291 aaKnown RBP19.22■□□□□ 0.67
ARHGEF28-201ENST00000296794 ESPNB1AK53 854 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms