RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 TRAK1Q9UPV9 953 aa15.49■□□□□ 0.07
RFC4-201ENST00000296273 WASLO00401 505 aaPredicted RBP15.49■□□□□ 0.07
RFC4-201ENST00000296273 HIRIP3Q9BW71 556 aaPredicted RBP15.49■□□□□ 0.07
RFC4-201ENST00000296273 NGDNQ8NEJ9 315 aaKnown RBP15.48■□□□□ 0.07
RFC4-201ENST00000296273 SPATA31A5Q5VU36 1347 aa15.47■□□□□ 0.07
RFC4-201ENST00000296273 SPATA31A7Q8IWB4 1347 aa15.47■□□□□ 0.07
RFC4-201ENST00000296273 MINK1Q8N4C8 1332 aaPredicted RBP15.47■□□□□ 0.07
RFC4-201ENST00000296273 PRR36Q9H6K5 1346 aa15.47■□□□□ 0.07
RFC4-201ENST00000296273 RGPD1P0DJD0 1748 aa15.46■□□□□ 0.07
RFC4-201ENST00000296273 RAB3GAP2Q9H2M9 1393 aa15.45■□□□□ 0.06
RFC4-201ENST00000296273 DISP2A7MBM2 1401 aa15.45■□□□□ 0.06
RFC4-201ENST00000296273 PAK3O75914 559 aaPredicted RBP15.45■□□□□ 0.06
RFC4-201ENST00000296273 PRDM11Q9NQV5 511 aa15.45■□□□□ 0.06
RFC4-201ENST00000296273 CRYBG1Q9Y4K1 1723 aa15.44■□□□□ 0.06
RFC4-201ENST00000296273 EN1Q05925 392 aaPredicted RBP15.44■□□□□ 0.06
RFC4-201ENST00000296273 DCAF11Q8TEB1 546 aa15.44■□□□□ 0.06
RFC4-201ENST00000296273 THSD7AQ9UPZ6 1657 aa15.44■□□□□ 0.06
RFC4-201ENST00000296273 PSDA5PKW4 1024 aaPredicted RBP15.43■□□□□ 0.06
RFC4-201ENST00000296273 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
RFC4-201ENST00000296273 KDM2AQ9Y2K7 1162 aa15.43■□□□□ 0.06
RFC4-201ENST00000296273 ITSN1Q15811 1721 aa15.43■□□□□ 0.06
RFC4-201ENST00000296273 ATP7BP35670 1465 aa15.42■□□□□ 0.06
RFC4-201ENST00000296273 ADRA2BP18089 450 aa15.41■□□□□ 0.06
RFC4-201ENST00000296273 SPATA31A1Q5TZJ5 1347 aa15.41■□□□□ 0.06
RFC4-201ENST00000296273 FAM196AQ6ZSG2 479 aa15.4■□□□□ 0.06
RFC4-201ENST00000296273 NUDT16Q96DE0 195 aaKnown RBP15.4■□□□□ 0.06
RFC4-201ENST00000296273 KIAA0232Q92628 1395 aa15.4■□□□□ 0.06
RFC4-201ENST00000296273 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
RFC4-201ENST00000296273 ARHGEF28Q8N1W1 1705 aaKnown RBP15.39■□□□□ 0.05
RFC4-201ENST00000296273 TNS1Q9HBL0 1735 aaKnown RBP15.39■□□□□ 0.05
RFC4-201ENST00000296273 PARD3Q8TEW0 1356 aa15.38■□□□□ 0.05
RFC4-201ENST00000296273 PHRF1Q9P1Y6 1649 aaKnown RBP15.38■□□□□ 0.05
RFC4-201ENST00000296273 R3HDM1Q15032 1099 aaKnown RBP15.37■□□□□ 0.05
RFC4-201ENST00000296273 POLR3AO14802 1390 aaPredicted RBP15.37■□□□□ 0.05
RFC4-201ENST00000296273 EZH2Q15910 746 aaKnown RBP15.36■□□□□ 0.05
RFC4-201ENST00000296273 BARGINQ6ZT62 677 aa15.36■□□□□ 0.05
RFC4-201ENST00000296273 STRN4Q9NRL3 753 aa15.36■□□□□ 0.05
RFC4-201ENST00000296273 CCDC61Q9Y6R9 512 aa15.36■□□□□ 0.05
RFC4-201ENST00000296273 ZC3H6P61129 1189 aaKnown RBP15.36■□□□□ 0.05
RFC4-201ENST00000296273 CHRNA2Q15822 529 aa15.36■□□□□ 0.05
RFC4-201ENST00000296273 CAMKK2Q96RR4 588 aa15.36■□□□□ 0.05
RFC4-201ENST00000296273 CDK19Q9BWU1 502 aa15.36■□□□□ 0.05
RFC4-201ENST00000296273 ACEP12821 1306 aa15.35■□□□□ 0.05
RFC4-201ENST00000296273 TRIM37O94972 964 aa15.35■□□□□ 0.05
RFC4-201ENST00000296273 EVA1CP58658 441 aa15.35■□□□□ 0.05
RFC4-201ENST00000296273 PDE3BQ13370 1112 aa15.35■□□□□ 0.05
RFC4-201ENST00000296273 SSH2Q76I76 1423 aa15.34■□□□□ 0.05
RFC4-201ENST00000296273 PLEKHG3A1L390 1219 aa15.34■□□□□ 0.05
RFC4-201ENST00000296273 APBA3O96018 575 aa15.34■□□□□ 0.05
RFC4-201ENST00000296273 NBPF8Q3BBV2 869 aa15.34■□□□□ 0.05
RFC4-201ENST00000296273 CPDO75976 1380 aa15.33■□□□□ 0.04
RFC4-201ENST00000296273 TOPAZ1Q8N9V7 1692 aa15.33■□□□□ 0.04
RFC4-201ENST00000296273 USP35Q9P2H5 1018 aa15.33■□□□□ 0.04
RFC4-201ENST00000296273 THRAP3Q9Y2W1 955 aaKnown RBP15.33■□□□□ 0.04
RFC4-201ENST00000296273 C11orf95C9JLR9 678 aaPredicted RBP15.32■□□□□ 0.04
RFC4-201ENST00000296273 NUTM2GQ5VZR2 741 aa15.32■□□□□ 0.04
RFC4-201ENST00000296273 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
RFC4-201ENST00000296273 ABTB2Q8N961 1025 aa15.32■□□□□ 0.04
RFC4-201ENST00000296273 NRKQ7Z2Y5 1582 aa15.31■□□□□ 0.04
RFC4-201ENST00000296273 TCP11L2Q8N4U5 519 aa15.31■□□□□ 0.04
RFC4-201ENST00000296273 BRD4O60885 1362 aaPredicted RBP15.31■□□□□ 0.04
RFC4-201ENST00000296273 KIAA1210Q9ULL0 1709 aa15.3■□□□□ 0.04
RFC4-201ENST00000296273 USP19O94966 1318 aa15.3■□□□□ 0.04
RFC4-201ENST00000296273 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
RFC4-201ENST00000296273 NLRP13Q86W25 1043 aa15.3■□□□□ 0.04
RFC4-201ENST00000296273 LMO7Q8WWI1 1683 aa15.3■□□□□ 0.04
RFC4-201ENST00000296273 CAMTA1Q9Y6Y1 1673 aa15.3■□□□□ 0.04
RFC4-201ENST00000296273 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
RFC4-201ENST00000296273 RREB1Q92766 1687 aa15.29■□□□□ 0.04
RFC4-201ENST00000296273 GCP02774 474 aa15.27■□□□□ 0.04
RFC4-201ENST00000296273 SRPK2P78362 688 aaKnown RBP15.26■□□□□ 0.03
RFC4-201ENST00000296273 PPIP5K1Q6PFW1 1433 aa15.26■□□□□ 0.03
RFC4-201ENST00000296273 COL5A2P05997 1499 aaPredicted RBP15.25■□□□□ 0.03
RFC4-201ENST00000296273 NUP188Q5SRE5 1749 aa15.25■□□□□ 0.03
RFC4-201ENST00000296273 PARP4Q9UKK3 1724 aaKnown RBP15.25■□□□□ 0.03
RFC4-201ENST00000296273 CRB1P82279 1406 aa15.25■□□□□ 0.03
RFC4-201ENST00000296273 CENPJQ9HC77 1338 aaPredicted RBP15.24■□□□□ 0.03
RFC4-201ENST00000296273 OVOS2A0A0G2JMS6 1433 aa15.23■□□□□ 0.03
RFC4-201ENST00000296273 OVOS2A0A0J9YW53 1432 aa15.23■□□□□ 0.03
RFC4-201ENST00000296273 OVOS2Q6IE36 1432 aa15.23■□□□□ 0.03
RFC4-201ENST00000296273 NBPF1Q3BBV0 1214 aa15.23■□□□□ 0.03
RFC4-201ENST00000296273 AATKQ6ZMQ8 1374 aa15.22■□□□□ 0.03
RFC4-201ENST00000296273 SPON1Q9HCB6 807 aa15.22■□□□□ 0.03
RFC4-201ENST00000296273 USP6P35125 1406 aa15.21■□□□□ 0.03
RFC4-201ENST00000296273 PLSCR1O15162 318 aa15.21■□□□□ 0.02
RFC4-201ENST00000296273 NLRP6P59044 892 aa15.21■□□□□ 0.02
RFC4-201ENST00000296273 CABP2Q9NPB3 220 aa15.21■□□□□ 0.02
RFC4-201ENST00000296273 SLIT3O75094 1523 aa15.2■□□□□ 0.02
RFC4-201ENST00000296273 RGPD3A6NKT7 1758 aaPredicted RBP15.2■□□□□ 0.02
RFC4-201ENST00000296273 RGPD4Q7Z3J3 1758 aa15.2■□□□□ 0.02
RFC4-201ENST00000296273 KCNQ2O43526 872 aa15.2■□□□□ 0.02
RFC4-201ENST00000296273 DDB1Q16531 1140 aa15.2■□□□□ 0.02
RFC4-201ENST00000296273 PPP1R1BQ9UD71 204 aaPredicted RBP15.2■□□□□ 0.02
RFC4-201ENST00000296273 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
RFC4-201ENST00000296273 CABP1Q9NZU7 370 aa15.19■□□□□ 0.02
RFC4-201ENST00000296273 NINLQ9Y2I6 1382 aa15.18■□□□□ 0.02
RFC4-201ENST00000296273 PEAK1Q9H792 1746 aa15.18■□□□□ 0.02
RFC4-201ENST00000296273 MSH5O43196 834 aa15.18■□□□□ 0.02
RFC4-201ENST00000296273 YY1P25490 414 aa15.18■□□□□ 0.02
RFC4-201ENST00000296273 TOM1L2Q6ZVM7 507 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms