RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
ABCF3-201ENST00000292808 PIK3R4Q99570 1358 aa18.54■□□□□ 0.56
ABCF3-201ENST00000292808 CHD2O14647 1828 aaKnown RBP18.54■□□□□ 0.56
ABCF3-201ENST00000292808 RGPD8O14715 1765 aaPredicted RBP18.53■□□□□ 0.56
ABCF3-201ENST00000292808 NME9Q86XW9 330 aa18.52■□□□□ 0.56
ABCF3-201ENST00000292808 PNPLA6Q8IY17 1366 aa18.52■□□□□ 0.56
ABCF3-201ENST00000292808 KCNA6P17658 529 aa18.52■□□□□ 0.56
ABCF3-201ENST00000292808 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
ABCF3-201ENST00000292808 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
ABCF3-201ENST00000292808 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
ABCF3-201ENST00000292808 DUSP27Q5VZP5 1158 aa18.51■□□□□ 0.55
ABCF3-201ENST00000292808 ANKLE2Q86XL3 938 aa18.51■□□□□ 0.55
ABCF3-201ENST00000292808 NUTM2FA1L443 756 aa18.5■□□□□ 0.55
ABCF3-201ENST00000292808 FBLN1P23142 703 aa18.5■□□□□ 0.55
ABCF3-201ENST00000292808 DMRT2Q9Y5R5 561 aa18.5■□□□□ 0.55
ABCF3-201ENST00000292808 PLEKHG3A1L390 1219 aa18.5■□□□□ 0.55
ABCF3-201ENST00000292808 SPINK5Q9NQ38 1064 aaPredicted RBP18.5■□□□□ 0.55
ABCF3-201ENST00000292808 GOLGA2Q08379 1002 aa18.49■□□□□ 0.55
ABCF3-201ENST00000292808 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
ABCF3-201ENST00000292808 TRMT2AQ8IZ69 625 aaKnown RBP18.49■□□□□ 0.55
ABCF3-201ENST00000292808 SLFN5Q08AF3 891 aa18.48■□□□□ 0.55
ABCF3-201ENST00000292808 NALCNQ8IZF0 1738 aa18.48■□□□□ 0.55
ABCF3-201ENST00000292808 FMN2Q9NZ56 1722 aa18.48■□□□□ 0.55
ABCF3-201ENST00000292808 ACEP12821 1306 aa18.48■□□□□ 0.55
ABCF3-201ENST00000292808 POLKQ9UBT6 870 aa18.48■□□□□ 0.55
ABCF3-201ENST00000292808 USP6P35125 1406 aa18.47■□□□□ 0.55
ABCF3-201ENST00000292808 ZNF692Q9BU19 519 aaPredicted RBP18.47■□□□□ 0.55
ABCF3-201ENST00000292808 SSH2Q76I76 1423 aa18.47■□□□□ 0.55
ABCF3-201ENST00000292808 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
ABCF3-201ENST00000292808 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-201ENST00000292808 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
ABCF3-201ENST00000292808 NGEFQ8N5V2 710 aa18.46■□□□□ 0.55
ABCF3-201ENST00000292808 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-201ENST00000292808 TCP11L2Q8N4U5 519 aa18.46■□□□□ 0.55
ABCF3-201ENST00000292808 AATKQ6ZMQ8 1374 aa18.45■□□□□ 0.54
ABCF3-201ENST00000292808 WWC1Q8IX03 1113 aa18.45■□□□□ 0.54
ABCF3-201ENST00000292808 RRP7AQ9Y3A4 280 aaKnown RBP18.45■□□□□ 0.54
ABCF3-201ENST00000292808 NPHP4O75161 1426 aaPredicted RBP18.45■□□□□ 0.54
ABCF3-201ENST00000292808 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
ABCF3-201ENST00000292808 PLEKHF1Q96S99 279 aa18.44■□□□□ 0.54
ABCF3-201ENST00000292808 OVOS2A0A0J9YW53 1432 aa18.44■□□□□ 0.54
ABCF3-201ENST00000292808 OVOS2Q6IE36 1432 aa18.44■□□□□ 0.54
ABCF3-201ENST00000292808 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
ABCF3-201ENST00000292808 EMILIN1Q9Y6C2 1016 aa18.43■□□□□ 0.54
ABCF3-201ENST00000292808 CDK12Q9NYV4 1490 aaPredicted RBP18.43■□□□□ 0.54
ABCF3-201ENST00000292808 ANKARQ7Z5J8 1434 aa18.43■□□□□ 0.54
ABCF3-201ENST00000292808 DIAPH1O60610 1272 aaKnown RBP18.42■□□□□ 0.54
ABCF3-201ENST00000292808 EXOC6Q8TAG9 804 aa18.42■□□□□ 0.54
ABCF3-201ENST00000292808 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
ABCF3-201ENST00000292808 PLIN1O60240 522 aa18.41■□□□□ 0.54
ABCF3-201ENST00000292808 COG3Q96JB2 828 aa18.41■□□□□ 0.54
ABCF3-201ENST00000292808 LRRC7Q96NW7 1537 aa18.41■□□□□ 0.54
ABCF3-201ENST00000292808 ANP32EQ9BTT0 268 aa18.41■□□□□ 0.54
ABCF3-201ENST00000292808 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
ABCF3-201ENST00000292808 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
ABCF3-201ENST00000292808 E9PSI1 815 aa18.4■□□□□ 0.54
ABCF3-201ENST00000292808 NWD1Q149M9 1564 aa18.39■□□□□ 0.53
ABCF3-201ENST00000292808 CCDC27Q2M243 656 aa18.39■□□□□ 0.53
ABCF3-201ENST00000292808 PIK3C2AO00443 1686 aa18.38■□□□□ 0.53
ABCF3-201ENST00000292808 PPM1GO15355 546 aaPredicted RBP18.38■□□□□ 0.53
ABCF3-201ENST00000292808 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
ABCF3-201ENST00000292808 PEAK1Q9H792 1746 aa18.38■□□□□ 0.53
ABCF3-201ENST00000292808 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
ABCF3-201ENST00000292808 RBM33Q96EV2 1170 aaKnown RBP18.37■□□□□ 0.53
ABCF3-201ENST00000292808 MARF1Q9Y4F3 1742 aaKnown RBP18.37■□□□□ 0.53
ABCF3-201ENST00000292808 USP31Q70CQ4 1352 aa18.36■□□□□ 0.53
ABCF3-201ENST00000292808 IL13P35225 146 aa18.36■□□□□ 0.53
ABCF3-201ENST00000292808 ADGRL3Q9HAR2 1447 aa18.36■□□□□ 0.53
ABCF3-201ENST00000292808 WDR63Q8IWG1 891 aa18.34■□□□□ 0.53
ABCF3-201ENST00000292808 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
ABCF3-201ENST00000292808 TTC21AQ8NDW8 1320 aa18.34■□□□□ 0.53
ABCF3-201ENST00000292808 TMPOP42166 694 aaKnown RBP18.33■□□□□ 0.53
ABCF3-201ENST00000292808 USP54Q70EL1 1684 aa18.33■□□□□ 0.53
ABCF3-201ENST00000292808 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.52
ABCF3-201ENST00000292808 TRIM35Q9UPQ4 493 aa18.33■□□□□ 0.52
ABCF3-201ENST00000292808 FCHSD2O94868 740 aa18.32■□□□□ 0.52
ABCF3-201ENST00000292808 C20orf194Q5TEA3 1177 aa18.31■□□□□ 0.52
ABCF3-201ENST00000292808 CRBNQ96SW2 442 aa18.31■□□□□ 0.52
ABCF3-201ENST00000292808 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
ABCF3-201ENST00000292808 PRKAR2BP31323 418 aa18.3■□□□□ 0.52
ABCF3-201ENST00000292808 RGPD1P0DJD0 1748 aa18.3■□□□□ 0.52
ABCF3-201ENST00000292808 MSH5O43196 834 aa18.29■□□□□ 0.52
ABCF3-201ENST00000292808 HMOX1P09601 288 aa18.29■□□□□ 0.52
ABCF3-201ENST00000292808 PHACTR3Q96KR7 559 aa18.28■□□□□ 0.52
ABCF3-201ENST00000292808 STRCP1A6NGW2 1772 aa18.28■□□□□ 0.52
ABCF3-201ENST00000292808 BCAR3O75815 825 aa18.27■□□□□ 0.52
ABCF3-201ENST00000292808 EIF4A2Q14240 407 aaKnown RBP18.26■□□□□ 0.51
ABCF3-201ENST00000292808 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
ABCF3-201ENST00000292808 PHF8Q9UPP1 1060 aa18.26■□□□□ 0.51
ABCF3-201ENST00000292808 RIPK4P57078 832 aa18.26■□□□□ 0.51
ABCF3-201ENST00000292808 MAP3K19Q56UN5 1328 aa18.25■□□□□ 0.51
ABCF3-201ENST00000292808 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
ABCF3-201ENST00000292808 SOX12O15370 315 aa18.24■□□□□ 0.51
ABCF3-201ENST00000292808 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
ABCF3-201ENST00000292808 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.23■□□□□ 0.51
ABCF3-201ENST00000292808 NFE2L2Q16236 605 aa18.22■□□□□ 0.51
ABCF3-201ENST00000292808 TSR2Q969E8 191 aaKnown RBP18.22■□□□□ 0.51
ABCF3-201ENST00000292808 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
ABCF3-201ENST00000292808 IL16Q14005 1332 aa18.22■□□□□ 0.51
ABCF3-201ENST00000292808 AEBP1Q8IUX7 1158 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms