RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 DUOX2Q9NRD8 1548 aa17.7■□□□□ 0.42
SEC16A-202ENST00000290037 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.423e-7■■■□□ 14.7
SEC16A-202ENST00000290037 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
SEC16A-202ENST00000290037 WDR33Q9C0J8 1336 aaKnown RBP17.7■□□□□ 0.42
SEC16A-202ENST00000290037 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
SEC16A-202ENST00000290037 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
SEC16A-202ENST00000290037 UBTFL1P0CB47 393 aaPredicted RBP17.69■□□□□ 0.42
SEC16A-202ENST00000290037 RPRD2Q5VT52 1461 aaKnown RBP17.69■□□□□ 0.42
SEC16A-202ENST00000290037 NCOA1Q15788 1441 aa17.69■□□□□ 0.42
SEC16A-202ENST00000290037 FRAT2O75474 233 aaPredicted RBP17.69■□□□□ 0.42
SEC16A-202ENST00000290037 TBC1D2BQ9UPU7 963 aa17.69■□□□□ 0.42
SEC16A-202ENST00000290037 NAIPQ13075 1403 aa17.68■□□□□ 0.42
SEC16A-202ENST00000290037 ALDH1L2Q3SY69 923 aa17.68■□□□□ 0.42
SEC16A-202ENST00000290037 CBFA2T2O43439 604 aa17.68■□□□□ 0.42
SEC16A-202ENST00000290037 NASPP49321 788 aaPredicted RBP17.68■□□□□ 0.42
SEC16A-202ENST00000290037 RILPL2Q969X0 211 aa17.68■□□□□ 0.42
SEC16A-202ENST00000290037 KINO60870 393 aaKnown RBP17.67■□□□□ 0.42
SEC16A-202ENST00000290037 GNL3LQ9NVN8 582 aaKnown RBP17.67■□□□□ 0.42
SEC16A-202ENST00000290037 PLEKHO1Q53GL0 409 aaPredicted RBP17.67■□□□□ 0.42
SEC16A-202ENST00000290037 FILIP1LQ4L180 1135 aa17.67■□□□□ 0.42
SEC16A-202ENST00000290037 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
SEC16A-202ENST00000290037 GZF1Q9H116 711 aaPredicted RBP17.66■□□□□ 0.42
SEC16A-202ENST00000290037 RAPGEF4Q8WZA2 1011 aa17.66■□□□□ 0.42
SEC16A-202ENST00000290037 WASF1Q92558 559 aa17.66■□□□□ 0.42
SEC16A-202ENST00000290037 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
SEC16A-202ENST00000290037 CFAP45Q9UL16 551 aa17.66■□□□□ 0.42
SEC16A-202ENST00000290037 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
SEC16A-202ENST00000290037 MCM3P25205 808 aa17.66■□□□□ 0.42
SEC16A-202ENST00000290037 GNAI2P04899 355 aa17.65■□□□□ 0.42
SEC16A-202ENST00000290037 APAF1O14727 1248 aa17.65■□□□□ 0.42
SEC16A-202ENST00000290037 FCHSD2O94868 740 aa17.65■□□□□ 0.42
SEC16A-202ENST00000290037 STIM1Q13586 685 aa17.65■□□□□ 0.42
SEC16A-202ENST00000290037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.65■□□□□ 0.42
SEC16A-202ENST00000290037 FKBP5Q13451 457 aaPredicted RBP17.65■□□□□ 0.42
SEC16A-202ENST00000290037 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
SEC16A-202ENST00000290037 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
SEC16A-202ENST00000290037 CCDC146Q8IYE0 955 aa17.64■□□□□ 0.42
SEC16A-202ENST00000290037 MLECQ14165 292 aa17.64■□□□□ 0.41
SEC16A-202ENST00000290037 FAM13BQ9NYF5 915 aa17.64■□□□□ 0.41
SEC16A-202ENST00000290037 CCDC192P0DO97 292 aa17.63■□□□□ 0.41
SEC16A-202ENST00000290037 RAB11FIP3O75154 756 aa17.63■□□□□ 0.41
SEC16A-202ENST00000290037 MCM5P33992 734 aa17.63■□□□□ 0.41
SEC16A-202ENST00000290037 PYM1Q9BRP8 204 aaKnown RBP17.63■□□□□ 0.41
SEC16A-202ENST00000290037 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
SEC16A-202ENST00000290037 IL16Q14005 1332 aa17.63■□□□□ 0.41
SEC16A-202ENST00000290037 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
SEC16A-202ENST00000290037 GRIN2AQ12879 1464 aa17.63■□□□□ 0.41
SEC16A-202ENST00000290037 VPS37DQ86XT2 251 aa17.63■□□□□ 0.41
SEC16A-202ENST00000290037 APBB1O00213 710 aa17.62■□□□□ 0.41
SEC16A-202ENST00000290037 ERLIN2O94905 339 aa17.62■□□□□ 0.41
SEC16A-202ENST00000290037 MNS1Q8NEH6 495 aa17.62■□□□□ 0.41
SEC16A-202ENST00000290037 TUBB4BP68371 445 aa17.62■□□□□ 0.41
SEC16A-202ENST00000290037 DNAI2Q9GZS0 605 aa17.62■□□□□ 0.41
SEC16A-202ENST00000290037 SCAF11Q99590 1463 aaKnown RBP17.62■□□□□ 0.41
SEC16A-202ENST00000290037 ZRSR2Q15696 482 aaKnown RBP17.62■□□□□ 0.41
SEC16A-202ENST00000290037 THEMISQ8N1K5 641 aaPredicted RBP17.62■□□□□ 0.41
SEC16A-202ENST00000290037 RPAP2Q8IXW5 612 aaPredicted RBP17.62■□□□□ 0.41
SEC16A-202ENST00000290037 GCC2Q8IWJ2 1684 aa17.61■□□□□ 0.41
SEC16A-202ENST00000290037 TRHP20396 242 aaPredicted RBP17.61■□□□□ 0.41
SEC16A-202ENST00000290037 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
SEC16A-202ENST00000290037 COG6Q9Y2V7 657 aa17.6■□□□□ 0.41
SEC16A-202ENST00000290037 UHRF1BP1Q6BDS2 1440 aa17.6■□□□□ 0.41
SEC16A-202ENST00000290037 TUBB4AP04350 444 aa17.6■□□□□ 0.41
SEC16A-202ENST00000290037 EXOC6Q8TAG9 804 aa17.6■□□□□ 0.41
SEC16A-202ENST00000290037 ERLIN1O75477 346 aa17.6■□□□□ 0.41
SEC16A-202ENST00000290037 TEX14Q8IWB6 1497 aa17.6■□□□□ 0.41
SEC16A-202ENST00000290037 NACAP1Q9BZK3 213 aa17.6■□□□□ 0.41
SEC16A-202ENST00000290037 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
SEC16A-202ENST00000290037 ZNF287Q9HBT7 754 aa17.6■□□□□ 0.41
SEC16A-202ENST00000290037 EIF3JO75822 258 aaKnown RBP17.59■□□□□ 0.41
SEC16A-202ENST00000290037 USP8P40818 1118 aa17.59■□□□□ 0.41
SEC16A-202ENST00000290037 NEMFO60524 1076 aa17.59■□□□□ 0.41
SEC16A-202ENST00000290037 GTPBP4Q9BZE4 634 aaKnown RBP17.59■□□□□ 0.41
SEC16A-202ENST00000290037 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
SEC16A-202ENST00000290037 TSPYL1Q9H0U9 437 aa17.59■□□□□ 0.41
SEC16A-202ENST00000290037 EVA1CP58658 441 aa17.59■□□□□ 0.41
SEC16A-202ENST00000290037 UGGT2Q9NYU1 1516 aa17.59■□□□□ 0.41
SEC16A-202ENST00000290037 TSPY26PQ9H489 355 aa17.59■□□□□ 0.41
SEC16A-202ENST00000290037 BCL11BQ9C0K0 894 aaPredicted RBP17.58■□□□□ 0.41
SEC16A-202ENST00000290037 ATF3P18847 181 aa17.58■□□□□ 0.41
SEC16A-202ENST00000290037 ANKRD18AQ8IVF6 992 aa17.58■□□□□ 0.41
SEC16A-202ENST00000290037 PHAXQ9H814 394 aaKnown RBP17.58■□□□□ 0.41
SEC16A-202ENST00000290037 ZNHIT6Q9NWK9 470 aaKnown RBP17.58■□□□□ 0.41
SEC16A-202ENST00000290037 HMGB1P09429 215 aaKnown RBP17.58■□□□□ 0.4
SEC16A-202ENST00000290037 MCTP1Q6DN14 999 aa17.58■□□□□ 0.4
SEC16A-202ENST00000290037 CCDC43Q96MW1 224 aaKnown RBP17.58■□□□□ 0.4
SEC16A-202ENST00000290037 TRIM22Q8IYM9 498 aa17.57■□□□□ 0.4
SEC16A-202ENST00000290037 TOMM22Q9NS69 142 aa17.57■□□□□ 0.4
SEC16A-202ENST00000290037 CTDP1Q9Y5B0 961 aaPredicted RBP17.57■□□□□ 0.4
SEC16A-202ENST00000290037 TTC21BQ7Z4L5 1316 aa17.57■□□□□ 0.4
SEC16A-202ENST00000290037 KIF6Q6ZMV9 814 aa17.57■□□□□ 0.4
SEC16A-202ENST00000290037 GOLGA6L7A0A1B0GV03 622 aa17.56■□□□□ 0.4
SEC16A-202ENST00000290037 SH2B1Q9NRF2 756 aaPredicted RBP17.56■□□□□ 0.4
SEC16A-202ENST00000290037 CTAGE5O15320 804 aa17.56■□□□□ 0.4
SEC16A-202ENST00000290037 CEP131Q9UPN4 1083 aa17.56■□□□□ 0.4
SEC16A-202ENST00000290037 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
SEC16A-202ENST00000290037 GBP3Q9H0R5 595 aa17.56■□□□□ 0.4
SEC16A-202ENST00000290037 EPS15P42566 896 aa17.56■□□□□ 0.4
SEC16A-202ENST00000290037 KRT85P78386 507 aa17.56■□□□□ 0.4
SEC16A-202ENST00000290037 MVPQ14764 893 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms