RNA–Protein interactions for RNA: ENST00000287820.10

PPARG-201, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPARG, Length 1,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-201ENST00000287820 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
PPARG-201ENST00000287820 TRPM3Q9HCF6 1732 aaPredicted RBP11.89□□□□□ -0.51
PPARG-201ENST00000287820 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
PPARG-201ENST00000287820 QTRT2Q9H974 415 aaKnown RBP11.89□□□□□ -0.51
PPARG-201ENST00000287820 SOCS7O14512 581 aa11.88□□□□□ -0.51
PPARG-201ENST00000287820 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
PPARG-201ENST00000287820 ALS2Q96Q42 1657 aa11.87□□□□□ -0.51
PPARG-201ENST00000287820 USP21Q9UK80 565 aa11.87□□□□□ -0.51
PPARG-201ENST00000287820 BRD4O60885 1362 aaPredicted RBP11.86□□□□□ -0.51
PPARG-201ENST00000287820 ATAD2Q6PL18 1390 aa11.86□□□□□ -0.51
PPARG-201ENST00000287820 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
PPARG-201ENST00000287820 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
PPARG-201ENST00000287820 ABTB2Q8N961 1025 aa11.86□□□□□ -0.51
PPARG-201ENST00000287820 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
PPARG-201ENST00000287820 RXRBP28702 533 aa11.85□□□□□ -0.51
PPARG-201ENST00000287820 USP47Q96K76 1375 aa11.85□□□□□ -0.51
PPARG-201ENST00000287820 MARF1Q9Y4F3 1742 aaKnown RBP11.85□□□□□ -0.51
PPARG-201ENST00000287820 SLC12A5Q9H2X9 1139 aa11.85□□□□□ -0.51
PPARG-201ENST00000287820 SSH2Q76I76 1423 aa11.84□□□□□ -0.51
PPARG-201ENST00000287820 NUTM2GQ5VZR2 741 aa11.84□□□□□ -0.51
PPARG-201ENST00000287820 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
PPARG-201ENST00000287820 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
PPARG-201ENST00000287820 RBM6P78332 1123 aaKnown RBP11.83□□□□□ -0.52
PPARG-201ENST00000287820 NLRP13Q86W25 1043 aa11.83□□□□□ -0.52
PPARG-201ENST00000287820 TRPC5Q9UL62 973 aaPredicted RBP11.83□□□□□ -0.52
PPARG-201ENST00000287820 USP6P35125 1406 aa11.83□□□□□ -0.52
PPARG-201ENST00000287820 UNC5CLQ8IV45 518 aa11.83□□□□□ -0.52
PPARG-201ENST00000287820 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
PPARG-201ENST00000287820 SLIT2O94813 1529 aa11.82□□□□□ -0.52
PPARG-201ENST00000287820 TMF1P82094 1093 aa11.82□□□□□ -0.52
PPARG-201ENST00000287820 TTC21BQ7Z4L5 1316 aa11.82□□□□□ -0.52
PPARG-201ENST00000287820 NLRP6P59044 892 aa11.81□□□□□ -0.52
PPARG-201ENST00000287820 GCP02774 474 aa11.8□□□□□ -0.52
PPARG-201ENST00000287820 KTN1Q86UP2 1357 aaKnown RBP11.8□□□□□ -0.52
PPARG-201ENST00000287820 ZC3H6P61129 1189 aaKnown RBP11.8□□□□□ -0.52
PPARG-201ENST00000287820 GJD4Q96KN9 370 aaPredicted RBP11.8□□□□□ -0.52
PPARG-201ENST00000287820 TERF2IPQ9NYB0 399 aa11.8□□□□□ -0.52
PPARG-201ENST00000287820 USP19O94966 1318 aa11.8□□□□□ -0.52
PPARG-201ENST00000287820 ATRNO75882 1429 aa11.79□□□□□ -0.52
PPARG-201ENST00000287820 EIF4G2P78344 907 aaKnown RBP eCLIP11.79□□□□□ -0.52
PPARG-201ENST00000287820 AKAP12Q02952 1782 aa11.79□□□□□ -0.52
PPARG-201ENST00000287820 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
PPARG-201ENST00000287820 HDGFL2Q7Z4V5 671 aaPredicted RBP11.79□□□□□ -0.52
PPARG-201ENST00000287820 TTC21AQ8NDW8 1320 aa11.79□□□□□ -0.52
PPARG-201ENST00000287820 ABCA3Q99758 1704 aa11.79□□□□□ -0.52
PPARG-201ENST00000287820 CD163L1Q9NR16 1453 aa11.79□□□□□ -0.52
PPARG-201ENST00000287820 CRYBG1Q9Y4K1 1723 aa11.79□□□□□ -0.52
PPARG-201ENST00000287820 BTG4Q9NY30 223 aa11.78□□□□□ -0.52
PPARG-201ENST00000287820 VPS72Q15906 364 aa11.78□□□□□ -0.52
PPARG-201ENST00000287820 PRDM11Q9NQV5 511 aa11.78□□□□□ -0.52
PPARG-201ENST00000287820 CDK12Q9NYV4 1490 aaPredicted RBP11.77□□□□□ -0.52
PPARG-201ENST00000287820 KIAA0232Q92628 1395 aa11.77□□□□□ -0.52
PPARG-201ENST00000287820 NINLQ9Y2I6 1382 aa11.77□□□□□ -0.52
PPARG-201ENST00000287820 HSPA5P11021 654 aaKnown RBP11.77□□□□□ -0.53
PPARG-201ENST00000287820 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
PPARG-201ENST00000287820 CHRNA2Q15822 529 aa11.76□□□□□ -0.53
PPARG-201ENST00000287820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.76□□□□□ -0.539e-7■□□□□ 11.3
PPARG-201ENST00000287820 NWD2Q9ULI1 1742 aa11.76□□□□□ -0.53
PPARG-201ENST00000287820 A0A1W2PP64 1363 aa11.75□□□□□ -0.53
PPARG-201ENST00000287820 CPDO75976 1380 aa11.75□□□□□ -0.53
PPARG-201ENST00000287820 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.75□□□□□ -0.53
PPARG-201ENST00000287820 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
PPARG-201ENST00000287820 KCNH5Q8NCM2 988 aa11.74□□□□□ -0.53
PPARG-201ENST00000287820 COL14A1Q05707 1796 aaKnown RBP11.74□□□□□ -0.53
PPARG-201ENST00000287820 MON2Q7Z3U7 1717 aa11.74□□□□□ -0.53
PPARG-201ENST00000287820 USP31Q70CQ4 1352 aa11.74□□□□□ -0.53
PPARG-201ENST00000287820 PIK3C2AO00443 1686 aa11.74□□□□□ -0.53
PPARG-201ENST00000287820 PHRF1Q9P1Y6 1649 aaKnown RBP11.74□□□□□ -0.53
PPARG-201ENST00000287820 ARHGEF25Q86VW2 580 aa11.74□□□□□ -0.53
PPARG-201ENST00000287820 NME9Q86XW9 330 aa11.74□□□□□ -0.53
PPARG-201ENST00000287820 EDC4Q6P2E9 1401 aaKnown RBP11.74□□□□□ -0.53
PPARG-201ENST00000287820 PLCH1Q4KWH8 1693 aa11.73□□□□□ -0.53
PPARG-201ENST00000287820 ANKRD36BQ8N2N9 1353 aa11.73□□□□□ -0.53
PPARG-201ENST00000287820 EVA1CP58658 441 aa11.72□□□□□ -0.53
PPARG-201ENST00000287820 CCDC9Q9Y3X0 531 aaKnown RBP11.72□□□□□ -0.53
PPARG-201ENST00000287820 NRKQ7Z2Y5 1582 aa11.72□□□□□ -0.53
PPARG-201ENST00000287820 SPATA31A5Q5VU36 1347 aa11.72□□□□□ -0.53
PPARG-201ENST00000287820 SPATA31A7Q8IWB4 1347 aa11.72□□□□□ -0.53
PPARG-201ENST00000287820 RGS12O14924 1447 aa11.72□□□□□ -0.53
PPARG-201ENST00000287820 SLIT3O75094 1523 aa11.72□□□□□ -0.53
PPARG-201ENST00000287820 CAMTA1Q9Y6Y1 1673 aa11.71□□□□□ -0.53
PPARG-201ENST00000287820 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
PPARG-201ENST00000287820 FYB1O15117 783 aa11.71□□□□□ -0.53
PPARG-201ENST00000287820 CARD14Q9BXL6 1004 aa11.71□□□□□ -0.53
PPARG-201ENST00000287820 AXIN2Q9Y2T1 843 aa11.71□□□□□ -0.53
PPARG-201ENST00000287820 AATKQ6ZMQ8 1374 aa11.71□□□□□ -0.53
PPARG-201ENST00000287820 GLI3P10071 1580 aa11.71□□□□□ -0.54
PPARG-201ENST00000287820 SEPT12Q8IYM1 358 aa11.7□□□□□ -0.54
PPARG-201ENST00000287820 STRN4Q9NRL3 753 aa11.7□□□□□ -0.54
PPARG-201ENST00000287820 NRAPQ86VF7 1730 aa11.7□□□□□ -0.54
PPARG-201ENST00000287820 SOX12O15370 315 aa11.7□□□□□ -0.54
PPARG-201ENST00000287820 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.54
PPARG-201ENST00000287820 EP400Q96L91 3159 aa11.7□□□□□ -0.54
PPARG-201ENST00000287820 SPATA31A1Q5TZJ5 1347 aa11.69□□□□□ -0.54
PPARG-201ENST00000287820 FAM98CQ17RN3 349 aaKnown RBP11.69□□□□□ -0.54
PPARG-201ENST00000287820 LARP1Q6PKG0 1096 aaKnown RBP11.69□□□□□ -0.54
PPARG-201ENST00000287820 COL18A1P39060 1754 aa11.68□□□□□ -0.54
PPARG-201ENST00000287820 LMO7Q8WWI1 1683 aa11.68□□□□□ -0.54
PPARG-201ENST00000287820 ZBTB7CA1YPR0 619 aa11.68□□□□□ -0.54
PPARG-201ENST00000287820 COG3Q96JB2 828 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms