RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 MPHOSPH10O00566 681 aaKnown RBP10.35□□□□□ -0.75
A1CF-201ENST00000282641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.35□□□□□ -0.75
A1CF-201ENST00000282641 WDR33Q9C0J8 1336 aaKnown RBP10.35□□□□□ -0.75
A1CF-201ENST00000282641 PAK3O75914 559 aaPredicted RBP10.35□□□□□ -0.75
A1CF-201ENST00000282641 ERCC6Q03468 1493 aa10.35□□□□□ -0.75
A1CF-201ENST00000282641 SMTNL1A8MU46 457 aa10.34□□□□□ -0.75
A1CF-201ENST00000282641 TULP1O00294 542 aaPredicted RBP10.34□□□□□ -0.75
A1CF-201ENST00000282641 NBPF7P0C2Y1 421 aaPredicted RBP10.34□□□□□ -0.75
A1CF-201ENST00000282641 ZKSCAN2Q63HK3 967 aa10.34□□□□□ -0.75
A1CF-201ENST00000282641 ZNF397Q8NF99 534 aaPredicted RBP10.34□□□□□ -0.75
A1CF-201ENST00000282641 PSMD1Q99460 953 aa10.34□□□□□ -0.75
A1CF-201ENST00000282641 NPC1L1Q9UHC9 1359 aa10.34□□□□□ -0.75
A1CF-201ENST00000282641 SCAF11Q99590 1463 aaKnown RBP10.34□□□□□ -0.75
A1CF-201ENST00000282641 ERC1Q8IUD2 1116 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 TSPY4P0CV99 314 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 TSPY10P0CW01 314 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 KIF18AQ8NI77 898 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 PLXNC1O60486 1568 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 RAD50Q92878 1312 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 CCDC196A0A1B0GTZ2 297 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 INTS3Q68E01 1043 aaKnown RBP10.33□□□□□ -0.76
A1CF-201ENST00000282641 GCC1Q96CN9 775 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 PLPPR3Q6T4P5 718 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 SUDS3Q9H7L9 328 aaPredicted RBP10.33□□□□□ -0.76
A1CF-201ENST00000282641 SWAP70Q9UH65 585 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 GPATCH3Q96I76 525 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 PPP1R9BQ96SB3 815 aa10.33□□□□□ -0.76
A1CF-201ENST00000282641 SRPK2P78362 688 aaKnown RBP10.32□□□□□ -0.76
A1CF-201ENST00000282641 SMC5Q8IY18 1101 aa10.32□□□□□ -0.76
A1CF-201ENST00000282641 TMCO3Q6UWJ1 677 aa10.32□□□□□ -0.76
A1CF-201ENST00000282641 ITGB1BP2Q9UKP3 347 aa10.32□□□□□ -0.76
A1CF-201ENST00000282641 CTCFLQ8NI51 663 aaPredicted RBP10.32□□□□□ -0.76
A1CF-201ENST00000282641 BLMP54132 1417 aaPredicted RBP10.32□□□□□ -0.76
A1CF-201ENST00000282641 ZSCAN12O43309 604 aa10.32□□□□□ -0.76
A1CF-201ENST00000282641 CBFA2T2O43439 604 aa10.32□□□□□ -0.76
A1CF-201ENST00000282641 PAXIP1Q6ZW49 1069 aaPredicted RBP10.32□□□□□ -0.76
A1CF-201ENST00000282641 XRCC6P12956 609 aaKnown RBP eCLIP10.31□□□□□ -0.76
A1CF-201ENST00000282641 HIRIP3Q9BW71 556 aaPredicted RBP10.31□□□□□ -0.76
A1CF-201ENST00000282641 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.31□□□□□ -0.76
A1CF-201ENST00000282641 NSD2O96028 1365 aa10.31□□□□□ -0.76
A1CF-201ENST00000282641 GTF2A1P52655 376 aaPredicted RBP10.31□□□□□ -0.76
A1CF-201ENST00000282641 DNAJC21Q5F1R6 531 aaKnown RBP10.31□□□□□ -0.76
A1CF-201ENST00000282641 GTF2F1P35269 517 aaKnown RBP eCLIP10.31□□□□□ -0.76
A1CF-201ENST00000282641 HOXA7P31268 230 aaPredicted RBP10.31□□□□□ -0.76
A1CF-201ENST00000282641 H0YHG0 523 aa10.31□□□□□ -0.76
A1CF-201ENST00000282641 ZNF445P59923 1031 aa10.31□□□□□ -0.76
A1CF-201ENST00000282641 CTAGE5O15320 804 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 SPC24Q8NBT2 197 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 CLASP1Q7Z460 1538 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 ANKRD20A12PQ8NF67 263 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 TBC1D32Q96NH3 1257 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 KANK1Q14678 1352 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 TDO2P48775 406 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 CPSF2Q9P2I0 782 aaKnown RBP10.3□□□□□ -0.76
A1CF-201ENST00000282641 MRVI1Q9Y6F6 885 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 K7ELQ4 463 aaPredicted RBP10.3□□□□□ -0.76
A1CF-201ENST00000282641 IPO7O95373 1038 aaKnown RBP10.3□□□□□ -0.76
A1CF-201ENST00000282641 ABCC2Q92887 1545 aa10.3□□□□□ -0.76
A1CF-201ENST00000282641 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
A1CF-201ENST00000282641 TRIM34Q9BYJ4 488 aa10.29□□□□□ -0.76
A1CF-201ENST00000282641 EPRSP07814 1512 aaKnown RBP10.29□□□□□ -0.76
A1CF-201ENST00000282641 PNISRQ8TF01 805 aaKnown RBP10.29□□□□□ -0.76
A1CF-201ENST00000282641 SH2D4BQ5SQS7 431 aa10.29□□□□□ -0.76
A1CF-201ENST00000282641 EIF5P55010 431 aaKnown RBP10.29□□□□□ -0.76
A1CF-201ENST00000282641 EHBP1Q8NDI1 1231 aa10.29□□□□□ -0.76
A1CF-201ENST00000282641 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
A1CF-201ENST00000282641 PPP6R1Q9UPN7 881 aa10.28□□□□□ -0.76
A1CF-201ENST00000282641 SHANK2Q9UPX8 1470 aa10.28□□□□□ -0.76
A1CF-201ENST00000282641 STK31Q9BXU1 1019 aa10.28□□□□□ -0.76
A1CF-201ENST00000282641 IFT57Q9NWB7 429 aa10.28□□□□□ -0.76
A1CF-201ENST00000282641 ATP6V1AP38606 617 aa10.28□□□□□ -0.76
A1CF-201ENST00000282641 CCDC83Q8IWF9 413 aa10.28□□□□□ -0.76
A1CF-201ENST00000282641 CCDC150Q8NCX0 1101 aa10.28□□□□□ -0.76
A1CF-201ENST00000282641 RUFY1Q96T51 708 aa10.28□□□□□ -0.76
A1CF-201ENST00000282641 BSDC1Q9NW68 430 aaPredicted RBP10.27□□□□□ -0.76
A1CF-201ENST00000282641 CCDC183Q5T5S1 534 aa10.27□□□□□ -0.76
A1CF-201ENST00000282641 PIBF1Q8WXW3 757 aa10.27□□□□□ -0.76
A1CF-201ENST00000282641 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.76
A1CF-201ENST00000282641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.77
A1CF-201ENST00000282641 BECN2A8MW95 431 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 RNF214Q8ND24 703 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 RUFY2Q8WXA3 655 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 ARHGAP25P42331 645 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 ANKRD36BQ8N2N9 1353 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 NEXNQ0ZGT2 675 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 FAM210AQ96ND0 272 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 ADGRL1O94910 1474 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 STK11IPQ8N1F8 1099 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 ANKRD18AQ8IVF6 992 aa10.27□□□□□ -0.77
A1CF-201ENST00000282641 SMC4Q9NTJ3 1288 aa10.26□□□□□ -0.77
A1CF-201ENST00000282641 C14orf37Q86TY3 774 aa10.26□□□□□ -0.77
A1CF-201ENST00000282641 DTNBP1Q96EV8 351 aa10.26□□□□□ -0.77
A1CF-201ENST00000282641 ADGBQ8N7X0 1667 aa10.26□□□□□ -0.77
A1CF-201ENST00000282641 CEP112Q8N8E3 955 aa10.26□□□□□ -0.77
A1CF-201ENST00000282641 PIK3C2GO75747 1445 aa10.26□□□□□ -0.77
A1CF-201ENST00000282641 NF2P35240 595 aa10.26□□□□□ -0.77
A1CF-201ENST00000282641 CECR2Q9BXF3 1484 aa10.26□□□□□ -0.77
A1CF-201ENST00000282641 EXOC6Q8TAG9 804 aa10.25□□□□□ -0.77
A1CF-201ENST00000282641 TCOF1Q13428 1488 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms