RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 SPHKAPQ2M3C7 1700 aa14.94□□□□□ -0.02
SLC13A3-201ENST00000279027 POLKQ9UBT6 870 aa14.94□□□□□ -0.02
SLC13A3-201ENST00000279027 WASLO00401 505 aaPredicted RBP14.93□□□□□ -0.02
SLC13A3-201ENST00000279027 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
SLC13A3-201ENST00000279027 TET3O43151 1660 aa14.93□□□□□ -0.02
SLC13A3-201ENST00000279027 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.93□□□□□ -0.02
SLC13A3-201ENST00000279027 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
SLC13A3-201ENST00000279027 TWISTNBQ3B726 338 aaPredicted RBP14.92□□□□□ -0.02
SLC13A3-201ENST00000279027 KDM5AP29375 1690 aaKnown RBP14.92□□□□□ -0.02
SLC13A3-201ENST00000279027 MCM10Q7L590 875 aa14.92□□□□□ -0.02
SLC13A3-201ENST00000279027 TRMT2AQ8IZ69 625 aaKnown RBP14.92□□□□□ -0.02
SLC13A3-201ENST00000279027 FCHSD2O94868 740 aa14.92□□□□□ -0.02
SLC13A3-201ENST00000279027 HSP90AB1P08238 724 aaKnown RBP14.91□□□□□ -0.02
SLC13A3-201ENST00000279027 GNAI1P63096 354 aa14.91□□□□□ -0.02
SLC13A3-201ENST00000279027 TSPYL6Q8N831 410 aa14.91□□□□□ -0.02
SLC13A3-201ENST00000279027 TRIM35Q9UPQ4 493 aa14.91□□□□□ -0.02
SLC13A3-201ENST00000279027 AEBP1Q8IUX7 1158 aa14.9□□□□□ -0.02
SLC13A3-201ENST00000279027 EFCAB6Q5THR3 1501 aa14.9□□□□□ -0.02
SLC13A3-201ENST00000279027 YTHDC2Q9H6S0 1430 aaKnown RBP14.9□□□□□ -0.02
SLC13A3-201ENST00000279027 KIF16BQ96L93 1317 aa14.9□□□□□ -0.02
SLC13A3-201ENST00000279027 TPRNQ4KMQ1 711 aa14.9□□□□□ -0.02
SLC13A3-201ENST00000279027 HSCBQ8IWL3 235 aa14.9□□□□□ -0.02
SLC13A3-201ENST00000279027 SYNMO15061 1565 aa14.9□□□□□ -0.02
SLC13A3-201ENST00000279027 NFE2L2Q16236 605 aa14.9□□□□□ -0.02
SLC13A3-201ENST00000279027 KRT24Q2M2I5 525 aa14.89□□□□□ -0.03
SLC13A3-201ENST00000279027 KIF1BO60333 1816 aa14.89□□□□□ -0.03
SLC13A3-201ENST00000279027 NLRP6P59044 892 aa14.89□□□□□ -0.03
SLC13A3-201ENST00000279027 MAP3K4Q9Y6R4 1608 aa14.89□□□□□ -0.03
SLC13A3-201ENST00000279027 ABCA6Q8N139 1617 aa14.88□□□□□ -0.03
SLC13A3-201ENST00000279027 RNF17Q9BXT8 1623 aaKnown RBP14.88□□□□□ -0.03
SLC13A3-201ENST00000279027 ZNF428Q96B54 188 aa14.88□□□□□ -0.03
SLC13A3-201ENST00000279027 MYOM2P54296 1465 aa14.88□□□□□ -0.03
SLC13A3-201ENST00000279027 LMOD3Q0VAK6 560 aa14.88□□□□□ -0.03
SLC13A3-201ENST00000279027 CEP152O94986 1710 aa14.88□□□□□ -0.03
SLC13A3-201ENST00000279027 C22orf23Q9BZE7 217 aa14.88□□□□□ -0.03
SLC13A3-201ENST00000279027 MLH3Q9UHC1 1453 aa14.87□□□□□ -0.03
SLC13A3-201ENST00000279027 HSP90AB2PQ58FF8 381 aa14.86□□□□□ -0.03
SLC13A3-201ENST00000279027 GSE1Q14687 1217 aa14.86□□□□□ -0.03
SLC13A3-201ENST00000279027 RIMS2Q9UQ26 1411 aa14.86□□□□□ -0.03
SLC13A3-201ENST00000279027 MBIPQ9NS73 344 aa14.85□□□□□ -0.03
SLC13A3-201ENST00000279027 PPRC1Q5VV67 1664 aaKnown RBP14.85□□□□□ -0.03
SLC13A3-201ENST00000279027 ABCA9Q8IUA7 1624 aa14.85□□□□□ -0.03
SLC13A3-201ENST00000279027 SBNO2Q9Y2G9 1366 aa14.85□□□□□ -0.03
SLC13A3-201ENST00000279027 IL27Q8NEV9 243 aa14.85□□□□□ -0.03
SLC13A3-201ENST00000279027 TSPYL4Q9UJ04 414 aa14.85□□□□□ -0.03
SLC13A3-201ENST00000279027 ABCC3O15438 1527 aa14.84□□□□□ -0.03
SLC13A3-201ENST00000279027 C8orf58Q8NAV2 365 aa14.84□□□□□ -0.03
SLC13A3-201ENST00000279027 CHMP4BQ9H444 224 aaKnown RBP14.84□□□□□ -0.03
SLC13A3-201ENST00000279027 NSD2O96028 1365 aa14.84□□□□□ -0.03
SLC13A3-201ENST00000279027 EIF2S2P20042 333 aaKnown RBP14.84□□□□□ -0.03
SLC13A3-201ENST00000279027 CCDC27Q2M243 656 aa14.84□□□□□ -0.03
SLC13A3-201ENST00000279027 ARAP3Q8WWN8 1544 aa14.84□□□□□ -0.03
SLC13A3-201ENST00000279027 NCLP19338 710 aaKnown RBP14.83□□□□□ -0.03
SLC13A3-201ENST00000279027 USP35Q9P2H5 1018 aa14.83□□□□□ -0.03
SLC13A3-201ENST00000279027 INSRP06213 1382 aa14.83□□□□□ -0.03
SLC13A3-201ENST00000279027 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.04
SLC13A3-201ENST00000279027 INO80Q9ULG1 1556 aaPredicted RBP14.83□□□□□ -0.04
SLC13A3-201ENST00000279027 ACEP12821 1306 aa14.83□□□□□ -0.04
SLC13A3-201ENST00000279027 XPCQ01831 940 aaPredicted RBP14.82□□□□□ -0.04
SLC13A3-201ENST00000279027 STK31Q9BXU1 1019 aa14.82□□□□□ -0.04
SLC13A3-201ENST00000279027 AMOTL2Q9Y2J4 779 aa14.82□□□□□ -0.04
SLC13A3-201ENST00000279027 PPIP5K1Q6PFW1 1433 aa14.82□□□□□ -0.04
SLC13A3-201ENST00000279027 NOL8Q76FK4 1167 aaKnown RBP14.82□□□□□ -0.04
SLC13A3-201ENST00000279027 SLC4A2P04920 1241 aa14.82□□□□□ -0.04
SLC13A3-201ENST00000279027 RSPH6AQ9H0K4 717 aa14.82□□□□□ -0.04
SLC13A3-201ENST00000279027 TSPOAP1O95153 1857 aa14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 EIF5BO60841 1220 aaKnown RBP14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 USHBP1Q8N6Y0 703 aa14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 ABTB2Q8N961 1025 aa14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 API5Q9BZZ5 524 aaKnown RBP14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 BRPF3Q9ULD4 1205 aa14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 FOXO3O43524 673 aa14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 HECW2Q9P2P5 1572 aa14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 ABCC11Q96J66 1382 aa14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 NINLQ9Y2I6 1382 aa14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 ZNF692Q9BU19 519 aaPredicted RBP14.81□□□□□ -0.04
SLC13A3-201ENST00000279027 F6X3S4 739 aa14.8□□□□□ -0.04
SLC13A3-201ENST00000279027 ZMYM3Q14202 1370 aa14.8□□□□□ -0.04
SLC13A3-201ENST00000279027 CHD1LQ86WJ1 897 aa14.8□□□□□ -0.04
SLC13A3-201ENST00000279027 FKBP5Q13451 457 aaPredicted RBP14.8□□□□□ -0.04
SLC13A3-201ENST00000279027 NEO1Q92859 1461 aa14.79□□□□□ -0.04
SLC13A3-201ENST00000279027 CT47B1P0C2W7 299 aaPredicted RBP14.79□□□□□ -0.04
SLC13A3-201ENST00000279027 SMARCA5O60264 1052 aaPredicted RBP14.79□□□□□ -0.04
SLC13A3-201ENST00000279027 FOXD4L5Q5VV16 416 aaPredicted RBP14.79□□□□□ -0.04
SLC13A3-201ENST00000279027 FOXD4L4Q8WXT5 416 aaPredicted RBP14.79□□□□□ -0.04
SLC13A3-201ENST00000279027 PUS7Q96PZ0 661 aaKnown RBP14.79□□□□□ -0.04
SLC13A3-201ENST00000279027 METP08581 1390 aa14.79□□□□□ -0.04
SLC13A3-201ENST00000279027 IQGAP1P46940 1657 aa14.79□□□□□ -0.04
SLC13A3-201ENST00000279027 LAMC1P11047 1609 aa14.78□□□□□ -0.04
SLC13A3-201ENST00000279027 VAMP4O75379 141 aa14.78□□□□□ -0.04
SLC13A3-201ENST00000279027 EIF4A2Q14240 407 aaKnown RBP14.78□□□□□ -0.04
SLC13A3-201ENST00000279027 TBC1D2Q9BYX2 928 aa14.77□□□□□ -0.04
SLC13A3-201ENST00000279027 TRIM6-TRIM34B2RNG4 842 aa14.77□□□□□ -0.04
SLC13A3-201ENST00000279027 AAMPQ13685 434 aa14.77□□□□□ -0.04
SLC13A3-201ENST00000279027 OS9Q13438 667 aaPredicted RBP14.77□□□□□ -0.05
SLC13A3-201ENST00000279027 ADGRB3O60242 1522 aa14.77□□□□□ -0.05
SLC13A3-201ENST00000279027 LTKP29376 864 aa14.76□□□□□ -0.05
SLC13A3-201ENST00000279027 TTC21BQ7Z4L5 1316 aa14.76□□□□□ -0.05
SLC13A3-201ENST00000279027 IL13P35225 146 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms