RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 AKAP12Q02952 1782 aa15.7■□□□□ 0.1
SSRP1-201ENST00000278412 ITSN1Q15811 1721 aa15.7■□□□□ 0.1
SSRP1-201ENST00000278412 MON2Q7Z3U7 1717 aa15.7■□□□□ 0.1
SSRP1-201ENST00000278412 PLEKHG3A1L390 1219 aa15.69■□□□□ 0.1
SSRP1-201ENST00000278412 TTC21BQ7Z4L5 1316 aa15.69■□□□□ 0.1
SSRP1-201ENST00000278412 EDC4Q6P2E9 1401 aaKnown RBP15.68■□□□□ 0.1
SSRP1-201ENST00000278412 WDR43Q15061 677 aaKnown RBP eCLIP15.68■□□□□ 0.1
SSRP1-201ENST00000278412 ZBED9Q6R2W3 1325 aa15.68■□□□□ 0.1
SSRP1-201ENST00000278412 FMN2Q9NZ56 1722 aa15.68■□□□□ 0.1
SSRP1-201ENST00000278412 ESCO1Q5FWF5 840 aa15.68■□□□□ 0.1
SSRP1-201ENST00000278412 CDCA7LQ96GN5 454 aa15.68■□□□□ 0.1
SSRP1-201ENST00000278412 TMEM94Q12767 1356 aa15.68■□□□□ 0.1
SSRP1-201ENST00000278412 USP6P35125 1406 aa15.68■□□□□ 0.1
SSRP1-201ENST00000278412 ADGRL3Q9HAR2 1447 aa15.68■□□□□ 0.1
SSRP1-201ENST00000278412 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
SSRP1-201ENST00000278412 POLKQ9UBT6 870 aa15.66■□□□□ 0.1
SSRP1-201ENST00000278412 FOXO3O43524 673 aa15.65■□□□□ 0.1
SSRP1-201ENST00000278412 PAK3O75914 559 aaPredicted RBP15.65■□□□□ 0.1
SSRP1-201ENST00000278412 NWD1Q149M9 1564 aa15.65■□□□□ 0.1
SSRP1-201ENST00000278412 NRKQ7Z2Y5 1582 aa15.65■□□□□ 0.1
SSRP1-201ENST00000278412 ANKRD26Q9UPS8 1709 aa15.65■□□□□ 0.1
SSRP1-201ENST00000278412 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
SSRP1-201ENST00000278412 MAP2P11137 1827 aaKnown RBP15.65■□□□□ 0.1
SSRP1-201ENST00000278412 NSD2O96028 1365 aa15.65■□□□□ 0.1
SSRP1-201ENST00000278412 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
SSRP1-201ENST00000278412 BLMP54132 1417 aaPredicted RBP15.64■□□□□ 0.09
SSRP1-201ENST00000278412 PHF8Q9UPP1 1060 aa15.64■□□□□ 0.09
SSRP1-201ENST00000278412 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
SSRP1-201ENST00000278412 POLR3AO14802 1390 aaPredicted RBP15.64■□□□□ 0.09
SSRP1-201ENST00000278412 APAF1O14727 1248 aa15.63■□□□□ 0.09
SSRP1-201ENST00000278412 DMRT2Q9Y5R5 561 aa15.63■□□□□ 0.09
SSRP1-201ENST00000278412 NEUROD2Q15784 382 aa15.63■□□□□ 0.09
SSRP1-201ENST00000278412 U2SURPO15042 1029 aaKnown RBP15.63■□□□□ 0.09
SSRP1-201ENST00000278412 COG3Q96JB2 828 aa15.63■□□□□ 0.09
SSRP1-201ENST00000278412 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
SSRP1-201ENST00000278412 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
SSRP1-201ENST00000278412 COL3A1P02461 1466 aaPredicted RBP15.61■□□□□ 0.09
SSRP1-201ENST00000278412 U2AF1L5P0DN76 240 aaPredicted RBP15.61■□□□□ 0.09
SSRP1-201ENST00000278412 U2AF1Q01081 240 aaKnown RBP eCLIP15.61■□□□□ 0.09
SSRP1-201ENST00000278412 PIK3C2AO00443 1686 aa15.6■□□□□ 0.09
SSRP1-201ENST00000278412 XIRP1Q702N8 1843 aaKnown RBP15.59■□□□□ 0.09
SSRP1-201ENST00000278412 ANKARQ7Z5J8 1434 aa15.59■□□□□ 0.09
SSRP1-201ENST00000278412 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
SSRP1-201ENST00000278412 NLRP6P59044 892 aa15.58■□□□□ 0.09
SSRP1-201ENST00000278412 C19orf44Q9H6X5 657 aa15.58■□□□□ 0.09
SSRP1-201ENST00000278412 OVOS2A0A0J9YW53 1432 aa15.58■□□□□ 0.09
SSRP1-201ENST00000278412 OVOS2Q6IE36 1432 aa15.58■□□□□ 0.09
SSRP1-201ENST00000278412 HMOX1P09601 288 aa15.58■□□□□ 0.08
SSRP1-201ENST00000278412 ABTB2Q8N961 1025 aa15.58■□□□□ 0.08
SSRP1-201ENST00000278412 HSP90AB2PQ58FF8 381 aa15.57■□□□□ 0.08
SSRP1-201ENST00000278412 LMOD2Q6P5Q4 547 aa15.57■□□□□ 0.08
SSRP1-201ENST00000278412 C1orf167Q5SNV9 1468 aa15.56■□□□□ 0.08
SSRP1-201ENST00000278412 PSME1Q06323 249 aa15.56■□□□□ 0.08
SSRP1-201ENST00000278412 CFAP53Q96M91 514 aa15.56■□□□□ 0.08
SSRP1-201ENST00000278412 PEAK1Q9H792 1746 aa15.56■□□□□ 0.08
SSRP1-201ENST00000278412 MARF1Q9Y4F3 1742 aaKnown RBP15.55■□□□□ 0.08
SSRP1-201ENST00000278412 ZBTB7CA1YPR0 619 aa15.54■□□□□ 0.08
SSRP1-201ENST00000278412 DIAPH1O60610 1272 aaKnown RBP15.54■□□□□ 0.08
SSRP1-201ENST00000278412 ATF3P18847 181 aa15.54■□□□□ 0.08
SSRP1-201ENST00000278412 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
SSRP1-201ENST00000278412 MST1RQ04912 1400 aa15.54■□□□□ 0.08
SSRP1-201ENST00000278412 FKBP8Q14318 412 aa15.54■□□□□ 0.08
SSRP1-201ENST00000278412 TCP11L2Q8N4U5 519 aa15.54■□□□□ 0.08
SSRP1-201ENST00000278412 PNPLA6Q8IY17 1366 aa15.54■□□□□ 0.08
SSRP1-201ENST00000278412 LRRC7Q96NW7 1537 aa15.54■□□□□ 0.08
SSRP1-201ENST00000278412 AEBP1Q8IUX7 1158 aa15.53■□□□□ 0.08
SSRP1-201ENST00000278412 IL13P35225 146 aa15.52■□□□□ 0.08
SSRP1-201ENST00000278412 PHACTR3Q96KR7 559 aa15.52■□□□□ 0.07
SSRP1-201ENST00000278412 NUDCQ9Y266 331 aa15.52■□□□□ 0.07
SSRP1-201ENST00000278412 PLEKHF1Q96S99 279 aa15.51■□□□□ 0.07
SSRP1-201ENST00000278412 TTC21AQ8NDW8 1320 aa15.5■□□□□ 0.07
SSRP1-201ENST00000278412 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
SSRP1-201ENST00000278412 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
SSRP1-201ENST00000278412 CABLES1Q8TDN4 633 aa15.5■□□□□ 0.07
SSRP1-201ENST00000278412 KRT28Q7Z3Y7 464 aa15.5■□□□□ 0.07
SSRP1-201ENST00000278412 LTV1Q96GA3 475 aaPredicted RBP15.5■□□□□ 0.07
SSRP1-201ENST00000278412 AATKQ6ZMQ8 1374 aa15.5■□□□□ 0.07
SSRP1-201ENST00000278412 USP31Q70CQ4 1352 aa15.5■□□□□ 0.07
SSRP1-201ENST00000278412 SMG6Q86US8 1419 aaKnown RBP15.49■□□□□ 0.07
SSRP1-201ENST00000278412 PRKAR2BP31323 418 aa15.49■□□□□ 0.07
SSRP1-201ENST00000278412 RUNDC1Q96C34 613 aa15.49■□□□□ 0.07
SSRP1-201ENST00000278412 IQSEC2Q5JU85 1478 aa15.48■□□□□ 0.07
SSRP1-201ENST00000278412 MSH6P52701 1360 aa15.48■□□□□ 0.07
SSRP1-201ENST00000278412 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
SSRP1-201ENST00000278412 CDK12Q9NYV4 1490 aaPredicted RBP15.47■□□□□ 0.07
SSRP1-201ENST00000278412 WWC1Q8IX03 1113 aa15.47■□□□□ 0.07
SSRP1-201ENST00000278412 BRINP3Q76B58 766 aa15.47■□□□□ 0.07
SSRP1-201ENST00000278412 THUMPD2Q9BTF0 503 aaKnown RBP15.47■□□□□ 0.07
SSRP1-201ENST00000278412 BCL11AQ9H165 835 aa15.47■□□□□ 0.07
SSRP1-201ENST00000278412 AMPHP49418 695 aa15.45■□□□□ 0.06
SSRP1-201ENST00000278412 CADPS2Q86UW7 1296 aa15.45■□□□□ 0.06
SSRP1-201ENST00000278412 USHBP1Q8N6Y0 703 aa15.45■□□□□ 0.06
SSRP1-201ENST00000278412 INSRP06213 1382 aa15.45■□□□□ 0.06
SSRP1-201ENST00000278412 DUSP27Q5VZP5 1158 aa15.45■□□□□ 0.06
SSRP1-201ENST00000278412 SULT6B1Q6IMI4 303 aa15.44■□□□□ 0.06
SSRP1-201ENST00000278412 TRPM3Q9HCF6 1732 aaPredicted RBP15.44■□□□□ 0.06
SSRP1-201ENST00000278412 SLAIN2Q9P270 581 aa15.44■□□□□ 0.06
SSRP1-201ENST00000278412 PLIN1O60240 522 aa15.44■□□□□ 0.06
SSRP1-201ENST00000278412 TMPOP42166 694 aaKnown RBP15.44■□□□□ 0.06
SSRP1-201ENST00000278412 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms