RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 DUSP27Q5VZP5 1158 aa28.18■■■□□ 2.1
GFRA3-201ENST00000274721 PPP4R2Q9NY27 417 aa28.17■■■□□ 2.1
GFRA3-201ENST00000274721 ITSN1Q15811 1721 aa28.16■■■□□ 2.1
GFRA3-201ENST00000274721 TRMT2AQ8IZ69 625 aaKnown RBP28.16■■■□□ 2.1
GFRA3-201ENST00000274721 PELP1Q8IZL8 1130 aaKnown RBP28.16■■■□□ 2.1
GFRA3-201ENST00000274721 SLFN5Q08AF3 891 aa28.15■■■□□ 2.1
GFRA3-201ENST00000274721 NME9Q86XW9 330 aa28.15■■■□□ 2.1
GFRA3-201ENST00000274721 IQSEC2Q5JU85 1478 aa28.14■■■□□ 2.09
GFRA3-201ENST00000274721 NCBP3Q53F19 620 aaKnown RBP28.13■■■□□ 2.09
GFRA3-201ENST00000274721 POLKQ9UBT6 870 aa28.13■■■□□ 2.09
GFRA3-201ENST00000274721 ACEP12821 1306 aa28.13■■■□□ 2.09
GFRA3-201ENST00000274721 U2AF1L5P0DN76 240 aaPredicted RBP28.12■■■□□ 2.09
GFRA3-201ENST00000274721 RRP1P56182 461 aaKnown RBP28.12■■■□□ 2.09
GFRA3-201ENST00000274721 U2AF1Q01081 240 aaKnown RBP eCLIP28.12■■■□□ 2.09
GFRA3-201ENST00000274721 NKTRP30414 1462 aaKnown RBP28.12■■■□□ 2.09
GFRA3-201ENST00000274721 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
GFRA3-201ENST00000274721 CHD2O14647 1828 aaKnown RBP28.11■■■□□ 2.09
GFRA3-201ENST00000274721 AATKQ6ZMQ8 1374 aa28.11■■■□□ 2.09
GFRA3-201ENST00000274721 TCP11L2Q8N4U5 519 aa28.11■■■□□ 2.09
GFRA3-201ENST00000274721 NUTM2FA1L443 756 aa28.1■■■□□ 2.09
GFRA3-201ENST00000274721 WWC1Q8IX03 1113 aa28.1■■■□□ 2.09
GFRA3-201ENST00000274721 ZRANB1Q9UGI0 708 aa28.09■■■□□ 2.09
GFRA3-201ENST00000274721 SPINK5Q9NQ38 1064 aaPredicted RBP28.09■■■□□ 2.09
GFRA3-201ENST00000274721 NRKQ7Z2Y5 1582 aa28.08■■■□□ 2.09
GFRA3-201ENST00000274721 TTC21BQ7Z4L5 1316 aa28.08■■■□□ 2.09
GFRA3-201ENST00000274721 MAP2P11137 1827 aaKnown RBP28.08■■■□□ 2.09
GFRA3-201ENST00000274721 COG3Q96JB2 828 aa28.08■■■□□ 2.09
GFRA3-201ENST00000274721 USP6P35125 1406 aa28.08■■■□□ 2.09
GFRA3-201ENST00000274721 DIAPH1O60610 1272 aaKnown RBP28.08■■■□□ 2.08
GFRA3-201ENST00000274721 FBLN1P23142 703 aa28.08■■■□□ 2.08
GFRA3-201ENST00000274721 SSH2Q76I76 1423 aa28.07■■■□□ 2.08
GFRA3-201ENST00000274721 E9PSI1 815 aa28.06■■■□□ 2.08
GFRA3-201ENST00000274721 CCDC27Q2M243 656 aa28.06■■■□□ 2.08
GFRA3-201ENST00000274721 PLEKHF1Q96S99 279 aa28.06■■■□□ 2.08
GFRA3-201ENST00000274721 DMRT2Q9Y5R5 561 aa28.05■■■□□ 2.08
GFRA3-201ENST00000274721 NPHP4O75161 1426 aaPredicted RBP28.04■■■□□ 2.08
GFRA3-201ENST00000274721 ANKARQ7Z5J8 1434 aa28.04■■■□□ 2.08
GFRA3-201ENST00000274721 U2SURPO15042 1029 aaKnown RBP28.03■■■□□ 2.08
GFRA3-201ENST00000274721 RGPD8O14715 1765 aaPredicted RBP28.01■■■□□ 2.08
GFRA3-201ENST00000274721 RRP7AQ9Y3A4 280 aaKnown RBP28.01■■■□□ 2.07
GFRA3-201ENST00000274721 EMILIN1Q9Y6C2 1016 aa28.01■■■□□ 2.07
GFRA3-201ENST00000274721 WDR63Q8IWG1 891 aa28■■■□□ 2.07
GFRA3-201ENST00000274721 CDK12Q9NYV4 1490 aaPredicted RBP28■■■□□ 2.07
GFRA3-201ENST00000274721 OVOS2A0A0J9YW53 1432 aa27.99■■■□□ 2.07
GFRA3-201ENST00000274721 OVOS2Q6IE36 1432 aa27.99■■■□□ 2.07
GFRA3-201ENST00000274721 FMN2Q9NZ56 1722 aa27.99■■■□□ 2.07
GFRA3-201ENST00000274721 NEUROD2Q15784 382 aa27.99■■■□□ 2.07
GFRA3-201ENST00000274721 PMFBP1Q8TBY8 1022 aa27.99■■■□□ 2.07
GFRA3-201ENST00000274721 PPM1GO15355 546 aaPredicted RBP27.97■■■□□ 2.07
GFRA3-201ENST00000274721 TTC21AQ8NDW8 1320 aa27.97■■■□□ 2.07
GFRA3-201ENST00000274721 FCHSD2O94868 740 aa27.97■■■□□ 2.07
GFRA3-201ENST00000274721 PNNQ9H307 717 aaKnown RBP27.96■■■□□ 2.07
GFRA3-201ENST00000274721 B4GALNT3Q6L9W6 998 aa27.96■■■□□ 2.07
GFRA3-201ENST00000274721 IL13P35225 146 aa27.95■■■□□ 2.06
GFRA3-201ENST00000274721 NGDNQ8NEJ9 315 aaKnown RBP27.94■■■□□ 2.06
GFRA3-201ENST00000274721 USP31Q70CQ4 1352 aa27.94■■■□□ 2.06
GFRA3-201ENST00000274721 RRS1Q15050 365 aaKnown RBP27.94■■■□□ 2.06
GFRA3-201ENST00000274721 NALCNQ8IZF0 1738 aa27.94■■■□□ 2.06
GFRA3-201ENST00000274721 TMPOP42166 694 aaKnown RBP27.93■■■□□ 2.06
GFRA3-201ENST00000274721 RSPH6AQ9H0K4 717 aa27.91■■■□□ 2.06
GFRA3-201ENST00000274721 ADGRL3Q9HAR2 1447 aa27.9■■■□□ 2.06
GFRA3-201ENST00000274721 MAPK8IP3Q9UPT6 1336 aa27.9■■■□□ 2.06
GFRA3-201ENST00000274721 PLIN1O60240 522 aa27.9■■■□□ 2.06
GFRA3-201ENST00000274721 EXOC6Q8TAG9 804 aa27.88■■■□□ 2.05
GFRA3-201ENST00000274721 TRIM35Q9UPQ4 493 aa27.88■■■□□ 2.05
GFRA3-201ENST00000274721 NWD1Q149M9 1564 aa27.88■■■□□ 2.05
GFRA3-201ENST00000274721 LRRC7Q96NW7 1537 aa27.87■■■□□ 2.05
GFRA3-201ENST00000274721 RBM33Q96EV2 1170 aaKnown RBP27.86■■■□□ 2.05
GFRA3-201ENST00000274721 PRKAR2BP31323 418 aa27.84■■■□□ 2.05
GFRA3-201ENST00000274721 CCDC136Q96JN2 1154 aa27.83■■■□□ 2.05
GFRA3-201ENST00000274721 TSHZ2Q9NRE2 1034 aa27.82■■■□□ 2.04
GFRA3-201ENST00000274721 RIPK4P57078 832 aa27.82■■■□□ 2.04
GFRA3-201ENST00000274721 PHF8Q9UPP1 1060 aa27.82■■■□□ 2.04
GFRA3-201ENST00000274721 PIK3C2AO00443 1686 aa27.82■■■□□ 2.04
GFRA3-201ENST00000274721 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.81■■■□□ 2.04
GFRA3-201ENST00000274721 MYH16Q9H6N6 1097 aa27.81■■■□□ 2.04
GFRA3-201ENST00000274721 HMOX1P09601 288 aa27.8■■■□□ 2.04
GFRA3-201ENST00000274721 IL16Q14005 1332 aa27.8■■■□□ 2.04
GFRA3-201ENST00000274721 PHACTR3Q96KR7 559 aa27.79■■■□□ 2.04
GFRA3-201ENST00000274721 C20orf194Q5TEA3 1177 aa27.79■■■□□ 2.04
GFRA3-201ENST00000274721 PEAK1Q9H792 1746 aa27.78■■■□□ 2.04
GFRA3-201ENST00000274721 EIF4A2Q14240 407 aaKnown RBP27.78■■■□□ 2.04
GFRA3-201ENST00000274721 BCAR3O75815 825 aa27.77■■■□□ 2.04
GFRA3-201ENST00000274721 NEFMP07197 916 aa27.77■■■□□ 2.04
GFRA3-201ENST00000274721 USP54Q70EL1 1684 aa27.77■■■□□ 2.04
GFRA3-201ENST00000274721 CRBNQ96SW2 442 aa27.77■■■□□ 2.04
GFRA3-201ENST00000274721 MAP3K19Q56UN5 1328 aa27.76■■■□□ 2.03
GFRA3-201ENST00000274721 NLRP6P59044 892 aa27.75■■■□□ 2.03
GFRA3-201ENST00000274721 NFE2L2Q16236 605 aa27.75■■■□□ 2.03
GFRA3-201ENST00000274721 HSP90AB2PQ58FF8 381 aa27.75■■■□□ 2.03
GFRA3-201ENST00000274721 PROSER2Q86WR7 435 aaPredicted RBP27.73■■■□□ 2.03
GFRA3-201ENST00000274721 MARF1Q9Y4F3 1742 aaKnown RBP27.73■■■□□ 2.03
GFRA3-201ENST00000274721 SBNO1A3KN83 1393 aa27.73■■■□□ 2.03
GFRA3-201ENST00000274721 RARSP54136 660 aaKnown RBP27.72■■■□□ 2.03
GFRA3-201ENST00000274721 C14orf37Q86TY3 774 aa27.72■■■□□ 2.03
GFRA3-201ENST00000274721 FANCIQ9NVI1 1328 aa27.72■■■□□ 2.03
GFRA3-201ENST00000274721 ESCO1Q5FWF5 840 aa27.72■■■□□ 2.03
GFRA3-201ENST00000274721 ABTB2Q8N961 1025 aa27.72■■■□□ 2.03
GFRA3-201ENST00000274721 FLT4P35916 1363 aa27.71■■■□□ 2.03
GFRA3-201ENST00000274721 CT47B1P0C2W7 299 aaPredicted RBP27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms