RNA–Protein interactions for RNA: ENST00000272317.10

RPS27A-201, Transcript of ribosomal protein S27a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS27A, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-201ENST00000272317 SBNO2Q9Y2G9 1366 aa23.49■■□□□ 1.35
RPS27A-201ENST00000272317 ABTB2Q8N961 1025 aa23.48■■□□□ 1.35
RPS27A-201ENST00000272317 CCER1Q8TC90 406 aaPredicted RBP23.48■■□□□ 1.35
RPS27A-201ENST00000272317 ZNF692Q9BU19 519 aaPredicted RBP23.47■■□□□ 1.35
RPS27A-201ENST00000272317 CDK12Q9NYV4 1490 aaPredicted RBP23.47■■□□□ 1.35
RPS27A-201ENST00000272317 BRD4O60885 1362 aaPredicted RBP23.46■■□□□ 1.35
RPS27A-201ENST00000272317 ATRNO75882 1429 aa23.46■■□□□ 1.35
RPS27A-201ENST00000272317 NUTM2GQ5VZR2 741 aa23.46■■□□□ 1.35
RPS27A-201ENST00000272317 GJD4Q96KN9 370 aaPredicted RBP23.46■■□□□ 1.35
RPS27A-201ENST00000272317 QRICH2Q9H0J4 1663 aa23.46■■□□□ 1.35
RPS27A-201ENST00000272317 SLIT2O94813 1529 aa23.45■■□□□ 1.34
RPS27A-201ENST00000272317 SLC24A1O60721 1099 aa23.45■■□□□ 1.34
RPS27A-201ENST00000272317 TRPM3Q9HCF6 1732 aaPredicted RBP23.45■■□□□ 1.34
RPS27A-201ENST00000272317 ATAD2Q6PL18 1390 aa23.44■■□□□ 1.34
RPS27A-201ENST00000272317 ST20-MTHFSA0A0A6YYL1 179 aa23.44■■□□□ 1.34
RPS27A-201ENST00000272317 ITSN1Q15811 1721 aa23.44■■□□□ 1.34
RPS27A-201ENST00000272317 NLRP13Q86W25 1043 aa23.42■■□□□ 1.34
RPS27A-201ENST00000272317 PUS7Q96PZ0 661 aaKnown RBP23.42■■□□□ 1.34
RPS27A-201ENST00000272317 TOPAZ1Q8N9V7 1692 aa23.41■■□□□ 1.34
RPS27A-201ENST00000272317 VPS72Q15906 364 aa23.4■■□□□ 1.34
RPS27A-201ENST00000272317 TESK2Q96S53 571 aa23.4■■□□□ 1.34
RPS27A-201ENST00000272317 PRDM11Q9NQV5 511 aa23.4■■□□□ 1.34
RPS27A-201ENST00000272317 BTG4Q9NY30 223 aa23.4■■□□□ 1.34
RPS27A-201ENST00000272317 ALS2Q96Q42 1657 aa23.4■■□□□ 1.34
RPS27A-201ENST00000272317 USP6P35125 1406 aa23.39■■□□□ 1.33
RPS27A-201ENST00000272317 ZC3H6P61129 1189 aaKnown RBP23.38■■□□□ 1.33
RPS27A-201ENST00000272317 RGS12O14924 1447 aa23.37■■□□□ 1.33
RPS27A-201ENST00000272317 NLRP6P59044 892 aa23.37■■□□□ 1.33
RPS27A-201ENST00000272317 TMC1Q8TDI8 760 aa23.37■■□□□ 1.33
RPS27A-201ENST00000272317 CCDC9Q9Y3X0 531 aaKnown RBP23.37■■□□□ 1.33
RPS27A-201ENST00000272317 SSH2Q76I76 1423 aa23.36■■□□□ 1.33
RPS27A-201ENST00000272317 GCP02774 474 aa23.36■■□□□ 1.33
RPS27A-201ENST00000272317 USP19O94966 1318 aa23.35■■□□□ 1.33
RPS27A-201ENST00000272317 TTC21BQ7Z4L5 1316 aa23.35■■□□□ 1.33
RPS27A-201ENST00000272317 UPF1Q92900 1129 aaKnown RBP eCLIP23.35■■□□□ 1.33
RPS27A-201ENST00000272317 KIAA0232Q92628 1395 aa23.35■■□□□ 1.33
RPS27A-201ENST00000272317 CHRNA2Q15822 529 aa23.34■■□□□ 1.33
RPS27A-201ENST00000272317 SLC12A5Q9H2X9 1139 aa23.34■■□□□ 1.33
RPS27A-201ENST00000272317 CPSF1Q10570 1443 aaKnown RBP23.33■■□□□ 1.33
RPS27A-201ENST00000272317 KTN1Q86UP2 1357 aaKnown RBP23.33■■□□□ 1.33
RPS27A-201ENST00000272317 USP47Q96K76 1375 aa23.33■■□□□ 1.33
RPS27A-201ENST00000272317 MARF1Q9Y4F3 1742 aaKnown RBP23.33■■□□□ 1.32
RPS27A-201ENST00000272317 ONECUT3O60422 494 aaPredicted RBP23.32■■□□□ 1.32
RPS27A-201ENST00000272317 HDGFL2Q7Z4V5 671 aaPredicted RBP23.32■■□□□ 1.32
RPS27A-201ENST00000272317 TTC21AQ8NDW8 1320 aa23.32■■□□□ 1.32
RPS27A-201ENST00000272317 TERF2IPQ9NYB0 399 aa23.31■■□□□ 1.32
RPS27A-201ENST00000272317 TMF1P82094 1093 aa23.3■■□□□ 1.32
RPS27A-201ENST00000272317 CPDO75976 1380 aa23.29■■□□□ 1.32
RPS27A-201ENST00000272317 EVA1CP58658 441 aa23.28■■□□□ 1.32
RPS27A-201ENST00000272317 SEPT12Q8IYM1 358 aa23.28■■□□□ 1.32
RPS27A-201ENST00000272317 ABCA3Q99758 1704 aa23.28■■□□□ 1.32
RPS27A-201ENST00000272317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.26■■□□□ 1.31
RPS27A-201ENST00000272317 KCNH5Q8NCM2 988 aa23.26■■□□□ 1.31
RPS27A-201ENST00000272317 SPATA31A5Q5VU36 1347 aa23.26■■□□□ 1.31
RPS27A-201ENST00000272317 SPATA31A7Q8IWB4 1347 aa23.26■■□□□ 1.31
RPS27A-201ENST00000272317 CDCA8Q53HL2 280 aa23.25■■□□□ 1.31
RPS27A-201ENST00000272317 STRN4Q9NRL3 753 aa23.25■■□□□ 1.31
RPS27A-201ENST00000272317 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.25■■□□□ 1.31
RPS27A-201ENST00000272317 COL14A1Q05707 1796 aaKnown RBP23.24■■□□□ 1.31
RPS27A-201ENST00000272317 FAM98CQ17RN3 349 aaKnown RBP23.24■■□□□ 1.31
RPS27A-201ENST00000272317 NINLQ9Y2I6 1382 aa23.24■■□□□ 1.31
RPS27A-201ENST00000272317 NWD2Q9ULI1 1742 aa23.23■■□□□ 1.31
RPS27A-201ENST00000272317 CD163L1Q9NR16 1453 aa23.23■■□□□ 1.31
RPS27A-201ENST00000272317 GLI3P10071 1580 aa23.23■■□□□ 1.31
RPS27A-201ENST00000272317 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
RPS27A-201ENST00000272317 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
RPS27A-201ENST00000272317 ARHGEF25Q86VW2 580 aa23.21■■□□□ 1.31
RPS27A-201ENST00000272317 SPATA31A1Q5TZJ5 1347 aa23.21■■□□□ 1.31
RPS27A-201ENST00000272317 PLCH1Q4KWH8 1693 aa23.2■■□□□ 1.3
RPS27A-201ENST00000272317 A0A1W2PP64 1363 aa23.2■■□□□ 1.3
RPS27A-201ENST00000272317 A0A0G2JS52 829 aa23.2■■□□□ 1.3
RPS27A-201ENST00000272317 MYT1Q01538 1121 aa23.2■■□□□ 1.3
RPS27A-201ENST00000272317 NME9Q86XW9 330 aa23.2■■□□□ 1.3
RPS27A-201ENST00000272317 ZRANB1Q9UGI0 708 aa23.2■■□□□ 1.3
RPS27A-201ENST00000272317 AATKQ6ZMQ8 1374 aa23.19■■□□□ 1.3
RPS27A-201ENST00000272317 USP31Q70CQ4 1352 aa23.19■■□□□ 1.3
RPS27A-201ENST00000272317 SOX12O15370 315 aa23.19■■□□□ 1.3
RPS27A-201ENST00000272317 PHRF1Q9P1Y6 1649 aaKnown RBP23.19■■□□□ 1.3
RPS27A-201ENST00000272317 EDC4Q6P2E9 1401 aaKnown RBP23.18■■□□□ 1.3
RPS27A-201ENST00000272317 LARP1Q6PKG0 1096 aaKnown RBP23.18■■□□□ 1.3
RPS27A-201ENST00000272317 KRT27Q7Z3Y8 459 aa23.18■■□□□ 1.3
RPS27A-201ENST00000272317 NRKQ7Z2Y5 1582 aa23.18■■□□□ 1.3
RPS27A-201ENST00000272317 SLIT3O75094 1523 aa23.18■■□□□ 1.3
RPS27A-201ENST00000272317 CCDC125Q86Z20 511 aa23.17■■□□□ 1.3
RPS27A-201ENST00000272317 CAMTA1Q9Y6Y1 1673 aa23.16■■□□□ 1.3
RPS27A-201ENST00000272317 EIF4G2P78344 907 aaKnown RBP eCLIP23.16■■□□□ 1.36e-10■□□□□ 9.1
RPS27A-201ENST00000272317 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
RPS27A-201ENST00000272317 BARGINQ6ZT62 677 aa23.14■■□□□ 1.29
RPS27A-201ENST00000272317 AXIN2Q9Y2T1 843 aa23.14■■□□□ 1.29
RPS27A-201ENST00000272317 ANKRD36BQ8N2N9 1353 aa23.14■■□□□ 1.29
RPS27A-201ENST00000272317 NRAPQ86VF7 1730 aa23.13■■□□□ 1.29
RPS27A-201ENST00000272317 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
RPS27A-201ENST00000272317 TCP11L2Q8N4U5 519 aa23.13■■□□□ 1.29
RPS27A-201ENST00000272317 AKAP12Q02952 1782 aa23.12■■□□□ 1.29
RPS27A-201ENST00000272317 THRAP3Q9Y2W1 955 aaKnown RBP23.12■■□□□ 1.29
RPS27A-201ENST00000272317 EP400Q96L91 3159 aa23.11■■□□□ 1.29
RPS27A-201ENST00000272317 HSPA5P11021 654 aaKnown RBP23.11■■□□□ 1.29
RPS27A-201ENST00000272317 COL5A2P05997 1499 aaPredicted RBP23.1■■□□□ 1.29
RPS27A-201ENST00000272317 TOM1L2Q6ZVM7 507 aa23.09■■□□□ 1.29
RPS27A-201ENST00000272317 COG3Q96JB2 828 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms