RNA–Protein interactions for RNA: ENST00000268220.11

SEC11A-201, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC11A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-201ENST00000268220 CCDC61Q9Y6R9 512 aa28.23■■■□□ 2.11
SEC11A-201ENST00000268220 TRPC5Q9UL62 973 aaPredicted RBP28.22■■■□□ 2.11
SEC11A-201ENST00000268220 ATP7BP35670 1465 aa28.21■■■□□ 2.11
SEC11A-201ENST00000268220 CCER2I3L3R5 266 aa28.21■■■□□ 2.11
SEC11A-201ENST00000268220 CABLES1Q8TDN4 633 aa28.21■■■□□ 2.11
SEC11A-201ENST00000268220 SRPK2P78362 688 aaKnown RBP28.2■■■□□ 2.11
SEC11A-201ENST00000268220 PAK3O75914 559 aaPredicted RBP28.19■■■□□ 2.1
SEC11A-201ENST00000268220 CDK12Q9NYV4 1490 aaPredicted RBP28.19■■■□□ 2.1
SEC11A-201ENST00000268220 ITSN1Q15811 1721 aa28.18■■■□□ 2.1
SEC11A-201ENST00000268220 MARF1Q9Y4F3 1742 aaKnown RBP28.17■■■□□ 2.1
SEC11A-201ENST00000268220 PLEKHG3A1L390 1219 aa28.14■■■□□ 2.1
SEC11A-201ENST00000268220 CABP2Q9NPB3 220 aa28.14■■■□□ 2.1
SEC11A-201ENST00000268220 BCL9LQ86UU0 1499 aa28.14■■■□□ 2.09
SEC11A-201ENST00000268220 ACEP12821 1306 aa28.13■■■□□ 2.09
SEC11A-201ENST00000268220 TMF1P82094 1093 aa28.13■■■□□ 2.09
SEC11A-201ENST00000268220 TRPM3Q9HCF6 1732 aaPredicted RBP28.13■■■□□ 2.09
SEC11A-201ENST00000268220 QRICH2Q9H0J4 1663 aa28.12■■■□□ 2.09
SEC11A-201ENST00000268220 ATRNO75882 1429 aa28.11■■■□□ 2.09
SEC11A-201ENST00000268220 EVC2Q86UK5 1308 aa28.11■■■□□ 2.09
SEC11A-201ENST00000268220 UNC5CLQ8IV45 518 aa28.11■■■□□ 2.09
SEC11A-201ENST00000268220 POLR3AO14802 1390 aaPredicted RBP28.11■■■□□ 2.09
SEC11A-201ENST00000268220 POLR3GLQ9BT43 218 aa28.1■■■□□ 2.09
SEC11A-201ENST00000268220 SBNO2Q9Y2G9 1366 aa28.09■■■□□ 2.09
SEC11A-201ENST00000268220 RGS12O14924 1447 aa28.08■■■□□ 2.09
SEC11A-201ENST00000268220 PPIP5K1Q6PFW1 1433 aa28.08■■■□□ 2.09
SEC11A-201ENST00000268220 ALS2Q96Q42 1657 aa28.08■■■□□ 2.09
SEC11A-201ENST00000268220 SLIT2O94813 1529 aa28.08■■■□□ 2.09
SEC11A-201ENST00000268220 SLC24A1O60721 1099 aa28.07■■■□□ 2.08
SEC11A-201ENST00000268220 GJD4Q96KN9 370 aaPredicted RBP28.07■■■□□ 2.08
SEC11A-201ENST00000268220 TOPAZ1Q8N9V7 1692 aa28.07■■■□□ 2.08
SEC11A-201ENST00000268220 CENPBP07199 599 aaPredicted RBP28.07■■■□□ 2.08
SEC11A-201ENST00000268220 YTHDC1Q96MU7 727 aaKnown RBP28.06■■■□□ 2.08
SEC11A-201ENST00000268220 FAM83GA6ND36 823 aa28.05■■■□□ 2.08
SEC11A-201ENST00000268220 PRKRIP1Q9H875 184 aaPredicted RBP28.05■■■□□ 2.08
SEC11A-201ENST00000268220 CABP1Q9NZU7 370 aa28.04■■■□□ 2.08
SEC11A-201ENST00000268220 ABCA3Q99758 1704 aa28.04■■■□□ 2.08
SEC11A-201ENST00000268220 CDCA8Q53HL2 280 aa28.02■■■□□ 2.08
SEC11A-201ENST00000268220 UPF1Q92900 1129 aaKnown RBP eCLIP28.02■■■□□ 2.084e-7■■■■□ 26.3
SEC11A-201ENST00000268220 MYOM1P52179 1685 aa28.01■■■□□ 2.08
SEC11A-201ENST00000268220 NUTM2GQ5VZR2 741 aa28.01■■■□□ 2.07
SEC11A-201ENST00000268220 ABTB2Q8N961 1025 aa28.01■■■□□ 2.07
SEC11A-201ENST00000268220 TNKS1BP1Q9C0C2 1729 aaKnown RBP28■■■□□ 2.07
SEC11A-201ENST00000268220 CCDC9Q9Y3X0 531 aaKnown RBP28■■■□□ 2.07
SEC11A-201ENST00000268220 VPS72Q15906 364 aa27.98■■■□□ 2.07
SEC11A-201ENST00000268220 PRDM11Q9NQV5 511 aa27.97■■■□□ 2.07
SEC11A-201ENST00000268220 BTG4Q9NY30 223 aa27.97■■■□□ 2.07
SEC11A-201ENST00000268220 BRD4O60885 1362 aaPredicted RBP27.97■■■□□ 2.07
SEC11A-201ENST00000268220 NWD2Q9ULI1 1742 aa27.96■■■□□ 2.07
SEC11A-201ENST00000268220 PLCH1Q4KWH8 1693 aa27.95■■■□□ 2.07
SEC11A-201ENST00000268220 NLRP13Q86W25 1043 aa27.94■■■□□ 2.06
SEC11A-201ENST00000268220 ATAD2Q6PL18 1390 aa27.93■■■□□ 2.06
SEC11A-201ENST00000268220 KTN1Q86UP2 1357 aaKnown RBP27.93■■■□□ 2.06
SEC11A-201ENST00000268220 ZNF692Q9BU19 519 aaPredicted RBP27.92■■■□□ 2.06
SEC11A-201ENST00000268220 COL14A1Q05707 1796 aaKnown RBP27.92■■■□□ 2.06
SEC11A-201ENST00000268220 ZC3H6P61129 1189 aaKnown RBP27.91■■■□□ 2.06
SEC11A-201ENST00000268220 USP6P35125 1406 aa27.91■■■□□ 2.06
SEC11A-201ENST00000268220 KIAA0232Q92628 1395 aa27.91■■■□□ 2.06
SEC11A-201ENST00000268220 CRYBG1Q9Y4K1 1723 aa27.91■■■□□ 2.06
SEC11A-201ENST00000268220 GLI3P10071 1580 aa27.9■■■□□ 2.06
SEC11A-201ENST00000268220 PER1O15534 1290 aaPredicted RBP27.89■■■□□ 2.06
SEC11A-201ENST00000268220 CHRNA2Q15822 529 aa27.87■■■□□ 2.05
SEC11A-201ENST00000268220 NLRP6P59044 892 aa27.87■■■□□ 2.05
SEC11A-201ENST00000268220 USP19O94966 1318 aa27.86■■■□□ 2.05
SEC11A-201ENST00000268220 PHRF1Q9P1Y6 1649 aaKnown RBP27.86■■■□□ 2.05
SEC11A-201ENST00000268220 SEPT12Q8IYM1 358 aa27.86■■■□□ 2.05
SEC11A-201ENST00000268220 GCP02774 474 aa27.85■■■□□ 2.05
SEC11A-201ENST00000268220 ONECUT3O60422 494 aaPredicted RBP27.84■■■□□ 2.05
SEC11A-201ENST00000268220 PANK3Q9H999 370 aa27.84■■■□□ 2.05
SEC11A-201ENST00000268220 A0A0G2JS52 829 aa27.84■■■□□ 2.05
SEC11A-201ENST00000268220 MYT1Q01538 1121 aa27.84■■■□□ 2.05
SEC11A-201ENST00000268220 NRAPQ86VF7 1730 aa27.82■■■□□ 2.04
SEC11A-201ENST00000268220 TMC1Q8TDI8 760 aa27.82■■■□□ 2.04
SEC11A-201ENST00000268220 SSH2Q76I76 1423 aa27.81■■■□□ 2.04
SEC11A-201ENST00000268220 EVA1CP58658 441 aa27.81■■■□□ 2.04
SEC11A-201ENST00000268220 RALBP1Q15311 655 aa27.81■■■□□ 2.04
SEC11A-201ENST00000268220 TTC21BQ7Z4L5 1316 aa27.81■■■□□ 2.04
SEC11A-201ENST00000268220 FAM98CQ17RN3 349 aaKnown RBP27.81■■■□□ 2.04
SEC11A-201ENST00000268220 PUS7Q96PZ0 661 aaKnown RBP27.81■■■□□ 2.04
SEC11A-201ENST00000268220 STRN4Q9NRL3 753 aa27.81■■■□□ 2.04
SEC11A-201ENST00000268220 SPATA31A5Q5VU36 1347 aa27.8■■■□□ 2.04
SEC11A-201ENST00000268220 SPATA31A7Q8IWB4 1347 aa27.8■■■□□ 2.04
SEC11A-201ENST00000268220 CPDO75976 1380 aa27.8■■■□□ 2.04
SEC11A-201ENST00000268220 PARD3Q8TEW0 1356 aa27.8■■■□□ 2.04
SEC11A-201ENST00000268220 CPSF1Q10570 1443 aaKnown RBP27.79■■■□□ 2.04
SEC11A-201ENST00000268220 TTC21AQ8NDW8 1320 aa27.79■■■□□ 2.04
SEC11A-201ENST00000268220 NRKQ7Z2Y5 1582 aa27.78■■■□□ 2.04
SEC11A-201ENST00000268220 CCDC184Q52MB2 194 aa27.78■■■□□ 2.04
SEC11A-201ENST00000268220 HDGFL2Q7Z4V5 671 aaPredicted RBP27.77■■■□□ 2.04
SEC11A-201ENST00000268220 CCDC125Q86Z20 511 aa27.77■■■□□ 2.04
SEC11A-201ENST00000268220 ZBTB7CA1YPR0 619 aa27.75■■■□□ 2.03
SEC11A-201ENST00000268220 KRT27Q7Z3Y8 459 aa27.75■■■□□ 2.03
SEC11A-201ENST00000268220 SLC12A5Q9H2X9 1139 aa27.75■■■□□ 2.03
SEC11A-201ENST00000268220 MRS2Q9HD23 443 aa27.75■■■□□ 2.03
SEC11A-201ENST00000268220 AKAP12Q02952 1782 aa27.75■■■□□ 2.03
SEC11A-201ENST00000268220 MYBBP1AQ9BQG0 1328 aaKnown RBP27.75■■■□□ 2.03
SEC11A-201ENST00000268220 TERF2IPQ9NYB0 399 aa27.75■■■□□ 2.03
SEC11A-201ENST00000268220 SPATA31A1Q5TZJ5 1347 aa27.73■■■□□ 2.03
SEC11A-201ENST00000268220 KCNH5Q8NCM2 988 aa27.73■■■□□ 2.03
SEC11A-201ENST00000268220 NPC1L1Q9UHC9 1359 aa27.73■■■□□ 2.03
SEC11A-201ENST00000268220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms