RNA–Protein interactions for RNA: ENST00000265195.9

SIL1-201, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SIL1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-201ENST00000265195 PHLPP1O60346 1717 aa23.49■■□□□ 1.35
SIL1-201ENST00000265195 CGNL1Q0VF96 1302 aa23.48■■□□□ 1.35
SIL1-201ENST00000265195 COL16A1Q07092 1604 aaPredicted RBP23.48■■□□□ 1.35
SIL1-201ENST00000265195 FOXO3O43524 673 aa23.47■■□□□ 1.35
SIL1-201ENST00000265195 MRS2Q9HD23 443 aa23.47■■□□□ 1.35
SIL1-201ENST00000265195 ZNF692Q9BU19 519 aaPredicted RBP23.45■■□□□ 1.34
SIL1-201ENST00000265195 ACEP12821 1306 aa23.45■■□□□ 1.34
SIL1-201ENST00000265195 PXDNQ92626 1479 aa23.44■■□□□ 1.34
SIL1-201ENST00000265195 NPHP3Q7Z494 1330 aa23.44■■□□□ 1.34
SIL1-201ENST00000265195 FYB1O15117 783 aa23.43■■□□□ 1.34
SIL1-201ENST00000265195 XPCQ01831 940 aaPredicted RBP23.43■■□□□ 1.34
SIL1-201ENST00000265195 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
SIL1-201ENST00000265195 SOS2Q07890 1332 aaPredicted RBP23.43■■□□□ 1.34
SIL1-201ENST00000265195 NLRP13Q86W25 1043 aa23.43■■□□□ 1.34
SIL1-201ENST00000265195 PPP2R1AP30153 589 aa23.42■■□□□ 1.34
SIL1-201ENST00000265195 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
SIL1-201ENST00000265195 MORC1Q86VD1 984 aa23.41■■□□□ 1.34
SIL1-201ENST00000265195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.41■■□□□ 1.348e-7■■■■□ 23.2
SIL1-201ENST00000265195 BRD4O60885 1362 aaPredicted RBP23.4■■□□□ 1.34
SIL1-201ENST00000265195 NSD2O96028 1365 aa23.4■■□□□ 1.34
SIL1-201ENST00000265195 NGDNQ8NEJ9 315 aaKnown RBP23.39■■□□□ 1.34
SIL1-201ENST00000265195 GGNBP2Q9H3C7 697 aa23.39■■□□□ 1.34
SIL1-201ENST00000265195 EDC4Q6P2E9 1401 aaKnown RBP23.39■■□□□ 1.33
SIL1-201ENST00000265195 AKAP12Q02952 1782 aa23.37■■□□□ 1.33
SIL1-201ENST00000265195 KRT28Q7Z3Y7 464 aa23.37■■□□□ 1.33
SIL1-201ENST00000265195 TRPM3Q9HCF6 1732 aaPredicted RBP23.37■■□□□ 1.33
SIL1-201ENST00000265195 MON2Q7Z3U7 1717 aa23.36■■□□□ 1.33
SIL1-201ENST00000265195 USP6P35125 1406 aa23.35■■□□□ 1.33
SIL1-201ENST00000265195 PSME1Q06323 249 aa23.35■■□□□ 1.33
SIL1-201ENST00000265195 TNNT2P45379 298 aaPredicted RBP23.34■■□□□ 1.33
SIL1-201ENST00000265195 PNISRQ8TF01 805 aaKnown RBP23.34■■□□□ 1.33
SIL1-201ENST00000265195 TTC21BQ7Z4L5 1316 aa23.34■■□□□ 1.33
SIL1-201ENST00000265195 NME9Q86XW9 330 aa23.34■■□□□ 1.33
SIL1-201ENST00000265195 FAM9BQ8IZU0 186 aa23.34■■□□□ 1.33
SIL1-201ENST00000265195 SSH2Q76I76 1423 aa23.33■■□□□ 1.33
SIL1-201ENST00000265195 LRRC59Q96AG4 307 aaKnown RBP23.32■■□□□ 1.32
SIL1-201ENST00000265195 ZRANB1Q9UGI0 708 aa23.32■■□□□ 1.32
SIL1-201ENST00000265195 SPATA31A3Q5VYP0 1347 aa23.31■■□□□ 1.32
SIL1-201ENST00000265195 SBNO1A3KN83 1393 aa23.31■■□□□ 1.32
SIL1-201ENST00000265195 SHPRHQ149N8 1683 aa23.31■■□□□ 1.32
SIL1-201ENST00000265195 JCADQ9P266 1359 aa23.31■■□□□ 1.32
SIL1-201ENST00000265195 ALS2Q96Q42 1657 aa23.3■■□□□ 1.32
SIL1-201ENST00000265195 TNS3Q68CZ2 1445 aa23.3■■□□□ 1.32
SIL1-201ENST00000265195 PNPLA6Q8IY17 1366 aa23.3■■□□□ 1.32
SIL1-201ENST00000265195 NRKQ7Z2Y5 1582 aa23.3■■□□□ 1.32
SIL1-201ENST00000265195 KIF20BQ96Q89 1820 aa23.28■■□□□ 1.32
SIL1-201ENST00000265195 ANKRD26Q9UPS8 1709 aa23.26■■□□□ 1.31
SIL1-201ENST00000265195 TTC21AQ8NDW8 1320 aa23.26■■□□□ 1.31
SIL1-201ENST00000265195 COL22A1Q8NFW1 1626 aaPredicted RBP23.25■■□□□ 1.31
SIL1-201ENST00000265195 PAK3O75914 559 aaPredicted RBP23.25■■□□□ 1.31
SIL1-201ENST00000265195 MTHFSP49914 203 aa23.25■■□□□ 1.31
SIL1-201ENST00000265195 COG3Q96JB2 828 aa23.24■■□□□ 1.31
SIL1-201ENST00000265195 FBLN1P23142 703 aa23.24■■□□□ 1.31
SIL1-201ENST00000265195 LMOD2Q6P5Q4 547 aa23.22■■□□□ 1.31
SIL1-201ENST00000265195 PIK3C2AO00443 1686 aa23.21■■□□□ 1.31
SIL1-201ENST00000265195 ARHGEF10O15013 1369 aa23.21■■□□□ 1.31
SIL1-201ENST00000265195 LRP6O75581 1613 aa23.2■■□□□ 1.31
SIL1-201ENST00000265195 CRYBG1Q9Y4K1 1723 aa23.19■■□□□ 1.3
SIL1-201ENST00000265195 SPATA31A6Q5VVP1 1343 aa23.19■■□□□ 1.3
SIL1-201ENST00000265195 NUTM2GQ5VZR2 741 aa23.19■■□□□ 1.3
SIL1-201ENST00000265195 OVOS2A0A0J9YW53 1432 aa23.19■■□□□ 1.3
SIL1-201ENST00000265195 OVOS2Q6IE36 1432 aa23.19■■□□□ 1.3
SIL1-201ENST00000265195 ABCA3Q99758 1704 aa23.19■■□□□ 1.3
SIL1-201ENST00000265195 USP31Q70CQ4 1352 aa23.19■■□□□ 1.3
SIL1-201ENST00000265195 MED1Q15648 1581 aaPredicted RBP23.18■■□□□ 1.3
SIL1-201ENST00000265195 ABTB2Q8N961 1025 aa23.17■■□□□ 1.3
SIL1-201ENST00000265195 CABLES1Q8TDN4 633 aa23.17■■□□□ 1.3
SIL1-201ENST00000265195 POLKQ9UBT6 870 aa23.17■■□□□ 1.3
SIL1-201ENST00000265195 MARF1Q9Y4F3 1742 aaKnown RBP23.17■■□□□ 1.3
SIL1-201ENST00000265195 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
SIL1-201ENST00000265195 ADAMTS8Q9UP79 889 aa23.16■■□□□ 1.3
SIL1-201ENST00000265195 AATKQ6ZMQ8 1374 aa23.16■■□□□ 1.3
SIL1-201ENST00000265195 PLEKHG5O94827 1062 aa23.15■■□□□ 1.3
SIL1-201ENST00000265195 NLRP6P59044 892 aa23.15■■□□□ 1.3
SIL1-201ENST00000265195 NUTM2BA6NNL0 878 aaPredicted RBP23.15■■□□□ 1.3
SIL1-201ENST00000265195 NUTM2EB1AL46 878 aaPredicted RBP23.15■■□□□ 1.3
SIL1-201ENST00000265195 NUTM2AQ8IVF1 878 aaPredicted RBP23.15■■□□□ 1.3
SIL1-201ENST00000265195 PHRF1Q9P1Y6 1649 aaKnown RBP23.13■■□□□ 1.29
SIL1-201ENST00000265195 CFAP53Q96M91 514 aa23.13■■□□□ 1.29
SIL1-201ENST00000265195 WDR43Q15061 677 aaKnown RBP eCLIP23.13■■□□□ 1.29
SIL1-201ENST00000265195 EMILIN1Q9Y6C2 1016 aa23.13■■□□□ 1.29
SIL1-201ENST00000265195 USP19O94966 1318 aa23.12■■□□□ 1.29
SIL1-201ENST00000265195 RRS1Q15050 365 aaKnown RBP23.12■■□□□ 1.29
SIL1-201ENST00000265195 USP54Q70EL1 1684 aa23.11■■□□□ 1.29
SIL1-201ENST00000265195 CENPBP07199 599 aaPredicted RBP23.11■■□□□ 1.29
SIL1-201ENST00000265195 PPM1GO15355 546 aaPredicted RBP23.1■■□□□ 1.29
SIL1-201ENST00000265195 MAP2P11137 1827 aaKnown RBP23.09■■□□□ 1.29
SIL1-201ENST00000265195 INSRP06213 1382 aa23.09■■□□□ 1.29
SIL1-201ENST00000265195 SLIT3O75094 1523 aa23.09■■□□□ 1.29
SIL1-201ENST00000265195 SOX12O15370 315 aa23.08■■□□□ 1.29
SIL1-201ENST00000265195 ADAMTS2O95450 1211 aa23.08■■□□□ 1.29
SIL1-201ENST00000265195 SMG6Q86US8 1419 aaKnown RBP23.08■■□□□ 1.28
SIL1-201ENST00000265195 COL3A1P02461 1466 aaPredicted RBP23.08■■□□□ 1.28
SIL1-201ENST00000265195 SENP3-EIF4A1A0A087X0R7 540 aa23.06■■□□□ 1.28
SIL1-201ENST00000265195 BLMP54132 1417 aaPredicted RBP23.05■■□□□ 1.28
SIL1-201ENST00000265195 GCP02774 474 aa23.05■■□□□ 1.28
SIL1-201ENST00000265195 HAP1P54257 671 aaPredicted RBP23.05■■□□□ 1.28
SIL1-201ENST00000265195 DIAPH1O60610 1272 aaKnown RBP23.04■■□□□ 1.28
SIL1-201ENST00000265195 MAP3K19Q56UN5 1328 aa23.03■■□□□ 1.28
SIL1-201ENST00000265195 NFAT5O94916 1531 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms