RNA–Protein interactions for RNA: ENST00000264639.8

PSMD3-201, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD3, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-201ENST00000264639 SPINK5Q9NQ38 1064 aaPredicted RBP24.57■■□□□ 1.52
PSMD3-201ENST00000264639 RIMS1Q86UR5 1692 aaKnown RBP24.56■■□□□ 1.52
PSMD3-201ENST00000264639 E9PSI1 815 aa24.56■■□□□ 1.52
PSMD3-201ENST00000264639 KIF20BQ96Q89 1820 aa24.56■■□□□ 1.52
PSMD3-201ENST00000264639 IQSEC2Q5JU85 1478 aa24.55■■□□□ 1.52
PSMD3-201ENST00000264639 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
PSMD3-201ENST00000264639 WWC1Q8IX03 1113 aa24.54■■□□□ 1.52
PSMD3-201ENST00000264639 PPIP5K1Q6PFW1 1433 aa24.54■■□□□ 1.52
PSMD3-201ENST00000264639 NKTRP30414 1462 aaKnown RBP24.54■■□□□ 1.52
PSMD3-201ENST00000264639 U2AF1L5P0DN76 240 aaPredicted RBP24.53■■□□□ 1.52
PSMD3-201ENST00000264639 U2AF1Q01081 240 aaKnown RBP eCLIP24.53■■□□□ 1.52
PSMD3-201ENST00000264639 TCP11L2Q8N4U5 519 aa24.53■■□□□ 1.52
PSMD3-201ENST00000264639 LAS1LQ9Y4W2 734 aaKnown RBP24.53■■□□□ 1.52
PSMD3-201ENST00000264639 EID1Q9Y6B2 187 aa24.53■■□□□ 1.52
PSMD3-201ENST00000264639 DMRT2Q9Y5R5 561 aa24.53■■□□□ 1.52
PSMD3-201ENST00000264639 ROBO2Q9HCK4 1378 aa24.53■■□□□ 1.52
PSMD3-201ENST00000264639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.52■■□□□ 1.52
PSMD3-201ENST00000264639 CPSF1Q10570 1443 aaKnown RBP24.52■■□□□ 1.52
PSMD3-201ENST00000264639 SLIT1O75093 1534 aa24.51■■□□□ 1.51
PSMD3-201ENST00000264639 NEUROD2Q15784 382 aa24.51■■□□□ 1.51
PSMD3-201ENST00000264639 NUDT16Q96DE0 195 aaKnown RBP24.51■■□□□ 1.51
PSMD3-201ENST00000264639 COL3A1P02461 1466 aaPredicted RBP24.51■■□□□ 1.51
PSMD3-201ENST00000264639 RRP7AQ9Y3A4 280 aaKnown RBP24.5■■□□□ 1.51
PSMD3-201ENST00000264639 ARHGAP23Q9P227 1491 aa24.49■■□□□ 1.51
PSMD3-201ENST00000264639 DDRGK1Q96HY6 314 aa24.49■■□□□ 1.51
PSMD3-201ENST00000264639 CCDC61Q9Y6R9 512 aa24.49■■□□□ 1.51
PSMD3-201ENST00000264639 EDC4Q6P2E9 1401 aaKnown RBP24.48■■□□□ 1.51
PSMD3-201ENST00000264639 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
PSMD3-201ENST00000264639 SLC26A8Q96RN1 970 aa24.47■■□□□ 1.51
PSMD3-201ENST00000264639 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
PSMD3-201ENST00000264639 U2SURPO15042 1029 aaKnown RBP24.46■■□□□ 1.51
PSMD3-201ENST00000264639 THEMISQ8N1K5 641 aaPredicted RBP24.46■■□□□ 1.51
PSMD3-201ENST00000264639 CRBNQ96SW2 442 aa24.46■■□□□ 1.51
PSMD3-201ENST00000264639 NCKAP5LQ9HCH0 1330 aa24.45■■□□□ 1.51
PSMD3-201ENST00000264639 CCDC27Q2M243 656 aa24.45■■□□□ 1.5
PSMD3-201ENST00000264639 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.45■■□□□ 1.5
PSMD3-201ENST00000264639 PNPLA6Q8IY17 1366 aa24.45■■□□□ 1.5
PSMD3-201ENST00000264639 ADGRB2O60241 1585 aa24.44■■□□□ 1.5
PSMD3-201ENST00000264639 NCBP3Q53F19 620 aaKnown RBP24.44■■□□□ 1.5
PSMD3-201ENST00000264639 C20orf194Q5TEA3 1177 aa24.44■■□□□ 1.5
PSMD3-201ENST00000264639 PTPRUQ92729 1446 aa24.43■■□□□ 1.5
PSMD3-201ENST00000264639 WDR63Q8IWG1 891 aa24.43■■□□□ 1.5
PSMD3-201ENST00000264639 PRR36Q9H6K5 1346 aa24.42■■□□□ 1.5
PSMD3-201ENST00000264639 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.42■■□□□ 1.5
PSMD3-201ENST00000264639 DIAPH1O60610 1272 aaKnown RBP24.42■■□□□ 1.5
PSMD3-201ENST00000264639 MON2Q7Z3U7 1717 aa24.42■■□□□ 1.5
PSMD3-201ENST00000264639 PLEKHF1Q96S99 279 aa24.4■■□□□ 1.5
PSMD3-201ENST00000264639 TBX22Q9Y458 520 aa24.4■■□□□ 1.5
PSMD3-201ENST00000264639 NME9Q86XW9 330 aa24.4■■□□□ 1.5
PSMD3-201ENST00000264639 POLKQ9UBT6 870 aa24.4■■□□□ 1.5
PSMD3-201ENST00000264639 ITSN1Q15811 1721 aa24.39■■□□□ 1.49
PSMD3-201ENST00000264639 AKAP12Q02952 1782 aa24.39■■□□□ 1.49
PSMD3-201ENST00000264639 ZNF692Q9BU19 519 aaPredicted RBP24.39■■□□□ 1.49
PSMD3-201ENST00000264639 FBLN1P23142 703 aa24.38■■□□□ 1.49
PSMD3-201ENST00000264639 AMOTL2Q9Y2J4 779 aa24.38■■□□□ 1.49
PSMD3-201ENST00000264639 MAPK8IP3Q9UPT6 1336 aa24.37■■□□□ 1.49
PSMD3-201ENST00000264639 MAP2P11137 1827 aaKnown RBP24.36■■□□□ 1.49
PSMD3-201ENST00000264639 BCAR3O75815 825 aa24.36■■□□□ 1.49
PSMD3-201ENST00000264639 DIP2AQ14689 1571 aa24.36■■□□□ 1.49
PSMD3-201ENST00000264639 PTCH1Q13635 1447 aa24.35■■□□□ 1.49
PSMD3-201ENST00000264639 KDM2BQ8NHM5 1336 aa24.35■■□□□ 1.49
PSMD3-201ENST00000264639 COG3Q96JB2 828 aa24.35■■□□□ 1.49
PSMD3-201ENST00000264639 RTN4Q9NQC3 1192 aaKnown RBP24.35■■□□□ 1.49
PSMD3-201ENST00000264639 GSE1Q14687 1217 aa24.35■■□□□ 1.49
PSMD3-201ENST00000264639 ZRANB1Q9UGI0 708 aa24.35■■□□□ 1.49
PSMD3-201ENST00000264639 TOPAZ1Q8N9V7 1692 aa24.34■■□□□ 1.49
PSMD3-201ENST00000264639 CEP170BQ9Y4F5 1589 aaPredicted RBP24.33■■□□□ 1.49
PSMD3-201ENST00000264639 TMPOP42166 694 aaKnown RBP24.33■■□□□ 1.49
PSMD3-201ENST00000264639 PNNQ9H307 717 aaKnown RBP24.33■■□□□ 1.49
PSMD3-201ENST00000264639 AATKQ6ZMQ8 1374 aa24.33■■□□□ 1.49
PSMD3-201ENST00000264639 NUTM2FA1L443 756 aa24.33■■□□□ 1.48
PSMD3-201ENST00000264639 NFKBIBQ15653 356 aa24.32■■□□□ 1.48
PSMD3-201ENST00000264639 MYH16Q9H6N6 1097 aa24.32■■□□□ 1.48
PSMD3-201ENST00000264639 EMILIN1Q9Y6C2 1016 aa24.32■■□□□ 1.48
PSMD3-201ENST00000264639 PLEKHG3A1L390 1219 aa24.3■■□□□ 1.48
PSMD3-201ENST00000264639 ACEP12821 1306 aa24.3■■□□□ 1.48
PSMD3-201ENST00000264639 FCHSD2O94868 740 aa24.3■■□□□ 1.48
PSMD3-201ENST00000264639 CDK12Q9NYV4 1490 aaPredicted RBP24.3■■□□□ 1.48
PSMD3-201ENST00000264639 TRIM35Q9UPQ4 493 aa24.28■■□□□ 1.48
PSMD3-201ENST00000264639 LRRC7Q96NW7 1537 aa24.28■■□□□ 1.48
PSMD3-201ENST00000264639 NRKQ7Z2Y5 1582 aa24.28■■□□□ 1.48
PSMD3-201ENST00000264639 SKAP1Q86WV1 359 aa24.27■■□□□ 1.48
PSMD3-201ENST00000264639 TTC21BQ7Z4L5 1316 aa24.27■■□□□ 1.48
PSMD3-201ENST00000264639 XRN1Q8IZH2 1706 aaKnown RBP24.26■■□□□ 1.47
PSMD3-201ENST00000264639 CENPQQ7L2Z9 268 aaPredicted RBP24.26■■□□□ 1.47
PSMD3-201ENST00000264639 RSPH6AQ9H0K4 717 aa24.26■■□□□ 1.47
PSMD3-201ENST00000264639 USP6P35125 1406 aa24.26■■□□□ 1.47
PSMD3-201ENST00000264639 RARSP54136 660 aaKnown RBP24.26■■□□□ 1.47
PSMD3-201ENST00000264639 RIPK4P57078 832 aa24.26■■□□□ 1.47
PSMD3-201ENST00000264639 RRS1Q15050 365 aaKnown RBP24.25■■□□□ 1.47
PSMD3-201ENST00000264639 PRKAR2BP31323 418 aa24.25■■□□□ 1.47
PSMD3-201ENST00000264639 CANXP27824 592 aaKnown RBP24.24■■□□□ 1.47
PSMD3-201ENST00000264639 IL13P35225 146 aa24.24■■□□□ 1.47
PSMD3-201ENST00000264639 PDE3AQ14432 1141 aa24.24■■□□□ 1.47
PSMD3-201ENST00000264639 BRPF3Q9ULD4 1205 aa24.24■■□□□ 1.47
PSMD3-201ENST00000264639 PIK3R4Q99570 1358 aa24.23■■□□□ 1.47
PSMD3-201ENST00000264639 IL16Q14005 1332 aa24.22■■□□□ 1.47
PSMD3-201ENST00000264639 FAM161AQ3B820 660 aa24.22■■□□□ 1.47
PSMD3-201ENST00000264639 HMOX1P09601 288 aa24.21■■□□□ 1.47
PSMD3-201ENST00000264639 KCNA6P17658 529 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms