RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 PKNOX2Q96KN3 472 aa18■□□□□ 0.47
NID1-201ENST00000264187 GGNBP2Q9H3C7 697 aa18■□□□□ 0.47
NID1-201ENST00000264187 DEF6Q9H4E7 631 aa18■□□□□ 0.47
NID1-201ENST00000264187 TBC1D2BQ9UPU7 963 aa18■□□□□ 0.47
NID1-201ENST00000264187 TDRD9Q8NDG6 1382 aaKnown RBP17.99■□□□□ 0.47
NID1-201ENST00000264187 TXLNAP40222 546 aa17.99■□□□□ 0.47
NID1-201ENST00000264187 CCDC181Q5TID7 509 aa17.99■□□□□ 0.47
NID1-201ENST00000264187 ERLIN2O94905 339 aa17.99■□□□□ 0.47
NID1-201ENST00000264187 KIAA0754O94854 1291 aa17.98■□□□□ 0.47
NID1-201ENST00000264187 CLASRPQ8N2M8 674 aaKnown RBP17.98■□□□□ 0.47
NID1-201ENST00000264187 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
NID1-201ENST00000264187 ZNHIT6Q9NWK9 470 aaKnown RBP17.98■□□□□ 0.47
NID1-201ENST00000264187 MTERF4Q7Z6M4 381 aaKnown RBP17.98■□□□□ 0.47
NID1-201ENST00000264187 SEPT11Q9NVA2 429 aaKnown RBP17.97■□□□□ 0.47
NID1-201ENST00000264187 LETM1O95202 739 aaPredicted RBP17.97■□□□□ 0.47
NID1-201ENST00000264187 IL27Q8NEV9 243 aa17.97■□□□□ 0.47
NID1-201ENST00000264187 MAP4K4O95819 1239 aaPredicted RBP17.97■□□□□ 0.47
NID1-201ENST00000264187 PPFIBP1Q86W92 1011 aa17.96■□□□□ 0.47
NID1-201ENST00000264187 CCP110O43303 1012 aa17.95■□□□□ 0.46
NID1-201ENST00000264187 IBSPP21815 317 aaPredicted RBP17.95■□□□□ 0.46
NID1-201ENST00000264187 PPP1R1BQ9UD71 204 aaPredicted RBP17.95■□□□□ 0.46
NID1-201ENST00000264187 MBD3O95983 291 aa17.95■□□□□ 0.46
NID1-201ENST00000264187 ZNF396Q96N95 335 aaPredicted RBP17.95■□□□□ 0.46
NID1-201ENST00000264187 ERICH4A6NGS2 130 aa17.94■□□□□ 0.46
NID1-201ENST00000264187 ME1P48163 572 aa17.94■□□□□ 0.46
NID1-201ENST00000264187 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
NID1-201ENST00000264187 FHOD3Q2V2M9 1422 aa17.93■□□□□ 0.46
NID1-201ENST00000264187 TAF3Q5VWG9 929 aa17.93■□□□□ 0.46
NID1-201ENST00000264187 LRRFIP2Q9Y608 721 aaKnown RBP17.93■□□□□ 0.46
NID1-201ENST00000264187 CCDC112Q8NEF3 446 aa17.93■□□□□ 0.46
NID1-201ENST00000264187 TNMDQ9H2S6 317 aa17.92■□□□□ 0.46
NID1-201ENST00000264187 NUP133Q8WUM0 1156 aa17.92■□□□□ 0.46
NID1-201ENST00000264187 SIL1Q9H173 461 aa17.92■□□□□ 0.46
NID1-201ENST00000264187 TTC39AQ5SRH9 613 aa17.92■□□□□ 0.46
NID1-201ENST00000264187 SSBP05455 408 aaKnown RBP eCLIP17.92■□□□□ 0.46
NID1-201ENST00000264187 GOLGA6L7A0A1B0GV03 622 aa17.91■□□□□ 0.46
NID1-201ENST00000264187 CABP2Q9NPB3 220 aa17.91■□□□□ 0.46
NID1-201ENST00000264187 CCDC97Q96F63 343 aaPredicted RBP17.91■□□□□ 0.46
NID1-201ENST00000264187 CNNM1Q9NRU3 951 aa17.91■□□□□ 0.46
NID1-201ENST00000264187 PDZRN3Q9UPQ7 1066 aa17.91■□□□□ 0.46
NID1-201ENST00000264187 PDCP20941 246 aa17.9■□□□□ 0.46
NID1-201ENST00000264187 HMGN5P82970 282 aaKnown RBP17.9■□□□□ 0.46
NID1-201ENST00000264187 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
NID1-201ENST00000264187 UACAQ9BZF9 1416 aa17.9■□□□□ 0.46
NID1-201ENST00000264187 SLC3A2P08195 630 aaKnown RBP17.9■□□□□ 0.46
NID1-201ENST00000264187 PIBF1Q8WXW3 757 aa17.9■□□□□ 0.46
NID1-201ENST00000264187 RSPH4AQ5TD94 716 aa17.9■□□□□ 0.46
NID1-201ENST00000264187 CCDC192P0DO97 292 aa17.89■□□□□ 0.45
NID1-201ENST00000264187 PRKCSHP14314 528 aaPredicted RBP17.89■□□□□ 0.45
NID1-201ENST00000264187 CCDC102AQ96A19 550 aa17.89■□□□□ 0.45
NID1-201ENST00000264187 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.45
NID1-201ENST00000264187 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
NID1-201ENST00000264187 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
NID1-201ENST00000264187 UQCRHLA0A096LP55 91 aa17.88■□□□□ 0.45
NID1-201ENST00000264187 UQCRHP07919 91 aa17.88■□□□□ 0.45
NID1-201ENST00000264187 SSR1P43307 286 aaKnown RBP17.88■□□□□ 0.45
NID1-201ENST00000264187 EZRP15311 586 aaKnown RBP17.87■□□□□ 0.45
NID1-201ENST00000264187 NLRP6P59044 892 aa17.87■□□□□ 0.45
NID1-201ENST00000264187 FILIP1Q7Z7B0 1213 aa17.87■□□□□ 0.45
NID1-201ENST00000264187 GNAI3P08754 354 aa17.87■□□□□ 0.45
NID1-201ENST00000264187 STIM1Q13586 685 aa17.87■□□□□ 0.45
NID1-201ENST00000264187 ADAMTS8Q9UP79 889 aa17.87■□□□□ 0.45
NID1-201ENST00000264187 ABCC8Q09428 1581 aa17.87■□□□□ 0.45
NID1-201ENST00000264187 CCDC30Q5VVM6 783 aa17.86■□□□□ 0.45
NID1-201ENST00000264187 KIF6Q6ZMV9 814 aa17.86■□□□□ 0.45
NID1-201ENST00000264187 CYP46A1Q9Y6A2 500 aa17.86■□□□□ 0.45
NID1-201ENST00000264187 RABEP1Q15276 862 aa17.86■□□□□ 0.45
NID1-201ENST00000264187 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
NID1-201ENST00000264187 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
NID1-201ENST00000264187 ERLIN1O75477 346 aa17.86■□□□□ 0.45
NID1-201ENST00000264187 LUC7LQ9NQ29 371 aaKnown RBP17.86■□□□□ 0.45
NID1-201ENST00000264187 CCDC69A6NI79 296 aa17.85■□□□□ 0.45
NID1-201ENST00000264187 EXOSC9Q06265 439 aaKnown RBP17.85■□□□□ 0.45
NID1-201ENST00000264187 KIF7Q2M1P5 1343 aa17.85■□□□□ 0.45
NID1-201ENST00000264187 MATR3P43243 847 aaKnown RBP eCLIP17.85■□□□□ 0.45
NID1-201ENST00000264187 ATF3P18847 181 aa17.85■□□□□ 0.45
NID1-201ENST00000264187 TRIM22Q8IYM9 498 aa17.85■□□□□ 0.45
NID1-201ENST00000264187 CCDC18Q5T9S5 1454 aa17.84■□□□□ 0.45
NID1-201ENST00000264187 NEBLO76041 1014 aa17.84■□□□□ 0.45
NID1-201ENST00000264187 EIF3JO75822 258 aaKnown RBP17.84■□□□□ 0.45
NID1-201ENST00000264187 LRRCC1Q9C099 1032 aa17.84■□□□□ 0.45
NID1-201ENST00000264187 PODXL2Q9NZ53 605 aa17.84■□□□□ 0.45
NID1-201ENST00000264187 RBM5P52756 815 aaKnown RBP eCLIP17.84■□□□□ 0.45
NID1-201ENST00000264187 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
NID1-201ENST00000264187 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
NID1-201ENST00000264187 MTHFSP49914 203 aa17.83■□□□□ 0.45
NID1-201ENST00000264187 DHX57Q6P158 1386 aaKnown RBP17.83■□□□□ 0.45
NID1-201ENST00000264187 SPINK5Q9NQ38 1064 aaPredicted RBP17.83■□□□□ 0.44
NID1-201ENST00000264187 GBP2P32456 591 aaPredicted RBP17.83■□□□□ 0.44
NID1-201ENST00000264187 SOGA3Q5TF21 947 aa17.83■□□□□ 0.44
NID1-201ENST00000264187 TCP11L2Q8N4U5 519 aa17.83■□□□□ 0.44
NID1-201ENST00000264187 HIP1O00291 1037 aa17.83■□□□□ 0.44
NID1-201ENST00000264187 STRN4Q9NRL3 753 aa17.83■□□□□ 0.44
NID1-201ENST00000264187 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
NID1-201ENST00000264187 DACH1Q9UI36 760 aa17.82■□□□□ 0.44
NID1-201ENST00000264187 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
NID1-201ENST00000264187 MCM2P49736 904 aa17.82■□□□□ 0.44
NID1-201ENST00000264187 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
NID1-201ENST00000264187 DYDC1Q8WWB3 177 aa17.82■□□□□ 0.44
NID1-201ENST00000264187 CCDC113Q9H0I3 377 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms