RNA–Protein interactions for RNA: ENST00000263238.6

ACTR3-201, Transcript of ARP3 actin related protein 3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3, Length 6,718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-201ENST00000263238 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
ACTR3-201ENST00000263238 NCOA2Q15596 1464 aa15.8■□□□□ 0.12
ACTR3-201ENST00000263238 TAF3Q5VWG9 929 aa15.8■□□□□ 0.12
ACTR3-201ENST00000263238 WWC1Q8IX03 1113 aa15.8■□□□□ 0.12
ACTR3-201ENST00000263238 G3BP1Q13283 466 aaKnown RBP eCLIP15.8■□□□□ 0.126e-7■■□□□ 12.8
ACTR3-201ENST00000263238 NINLQ9Y2I6 1382 aa15.79■□□□□ 0.12
ACTR3-201ENST00000263238 FILIP1Q7Z7B0 1213 aa15.79■□□□□ 0.12
ACTR3-201ENST00000263238 WDR33Q9C0J8 1336 aaKnown RBP15.79■□□□□ 0.12
ACTR3-201ENST00000263238 STK11IPQ8N1F8 1099 aa15.79■□□□□ 0.12
ACTR3-201ENST00000263238 ZFP91Q96JP5 570 aaPredicted RBP15.79■□□□□ 0.12
ACTR3-201ENST00000263238 MCM2P49736 904 aa15.79■□□□□ 0.12
ACTR3-201ENST00000263238 POLR3GO15318 223 aaPredicted RBP15.78■□□□□ 0.12
ACTR3-201ENST00000263238 SERPINC1P01008 464 aa15.78■□□□□ 0.12
ACTR3-201ENST00000263238 ZNF830Q96NB3 372 aaPredicted RBP15.78■□□□□ 0.12
ACTR3-201ENST00000263238 ERCC4Q92889 916 aaPredicted RBP15.78■□□□□ 0.12
ACTR3-201ENST00000263238 CHMP4AQ9BY43 222 aa15.78■□□□□ 0.12
ACTR3-201ENST00000263238 SLFN5Q08AF3 891 aa15.78■□□□□ 0.12
ACTR3-201ENST00000263238 USP25Q9UHP3 1055 aa15.77■□□□□ 0.12
ACTR3-201ENST00000263238 IBSPP21815 317 aaPredicted RBP15.77■□□□□ 0.12
ACTR3-201ENST00000263238 CLCN1P35523 988 aa15.77■□□□□ 0.11
ACTR3-201ENST00000263238 CPLX2Q6PUV4 134 aaKnown RBP15.77■□□□□ 0.11
ACTR3-201ENST00000263238 UBTFL1P0CB47 393 aaPredicted RBP15.76■□□□□ 0.11
ACTR3-201ENST00000263238 PSMA5P28066 241 aa15.76■□□□□ 0.11
ACTR3-201ENST00000263238 CHMP4CQ96CF2 233 aa15.76■□□□□ 0.11
ACTR3-201ENST00000263238 TMX1Q9H3N1 280 aa15.76■□□□□ 0.11
ACTR3-201ENST00000263238 FSD1Q9BTV5 496 aa15.76■□□□□ 0.11
ACTR3-201ENST00000263238 IGHDP01880 384 aa15.75■□□□□ 0.11
ACTR3-201ENST00000263238 ATF7IPQ6VMQ6 1270 aa15.75■□□□□ 0.11
ACTR3-201ENST00000263238 SURF6O75683 361 aaKnown RBP15.75■□□□□ 0.11
ACTR3-201ENST00000263238 CCP110O43303 1012 aa15.75■□□□□ 0.11
ACTR3-201ENST00000263238 C16orf45Q96MC5 204 aaPredicted RBP15.75■□□□□ 0.11
ACTR3-201ENST00000263238 CFTRP13569 1480 aa15.75■□□□□ 0.11
ACTR3-201ENST00000263238 TMEM132EQ6IEE7 984 aa15.75■□□□□ 0.11
ACTR3-201ENST00000263238 TMEM57Q8N5G2 664 aa15.75■□□□□ 0.11
ACTR3-201ENST00000263238 NUP62CLQ9H1M0 184 aa15.74■□□□□ 0.11
ACTR3-201ENST00000263238 BBXQ8WY36 941 aaPredicted RBP15.74■□□□□ 0.11
ACTR3-201ENST00000263238 GDPD2Q9HCC8 539 aa15.74■□□□□ 0.11
ACTR3-201ENST00000263238 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
ACTR3-201ENST00000263238 FBXO3Q9UK99 471 aa15.74■□□□□ 0.11
ACTR3-201ENST00000263238 TWISTNBQ3B726 338 aaPredicted RBP15.74■□□□□ 0.11
ACTR3-201ENST00000263238 CCDC102AQ96A19 550 aa15.74■□□□□ 0.11
ACTR3-201ENST00000263238 CT47B1P0C2W7 299 aaPredicted RBP15.74■□□□□ 0.11
ACTR3-201ENST00000263238 GPATCH11Q8N954 259 aa15.74■□□□□ 0.11
ACTR3-201ENST00000263238 ATP2B1P20020 1258 aa15.74■□□□□ 0.11
ACTR3-201ENST00000263238 TRDNQ13061 729 aa15.74■□□□□ 0.11
ACTR3-201ENST00000263238 CENPHQ9H3R5 247 aa15.73■□□□□ 0.11
ACTR3-201ENST00000263238 AIMP1Q12904 312 aaKnown RBP15.73■□□□□ 0.11
ACTR3-201ENST00000263238 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
ACTR3-201ENST00000263238 GTF2F1P35269 517 aaKnown RBP eCLIP15.73■□□□□ 0.116e-8■■■■■ 32.5
ACTR3-201ENST00000263238 LARP1BQ659C4 914 aaKnown RBP15.73■□□□□ 0.11
ACTR3-201ENST00000263238 TRMT1Q9NXH9 659 aaKnown RBP15.73■□□□□ 0.11
ACTR3-201ENST00000263238 NEUROD6Q96NK8 337 aa15.73■□□□□ 0.11
ACTR3-201ENST00000263238 SMARCA5O60264 1052 aaPredicted RBP15.72■□□□□ 0.11
ACTR3-201ENST00000263238 TEFQ10587 303 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 C1orf141Q5JVX7 400 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 PRKAR2BP31323 418 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 RSPH4AQ5TD94 716 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 SPATA32Q96LK8 384 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 DNAJC2Q99543 621 aaKnown RBP15.72■□□□□ 0.11
ACTR3-201ENST00000263238 ME1P48163 572 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 ZSCAN23Q3MJ62 389 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 DYNC1I1O14576 645 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 IGSF3O75054 1194 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 KRT85P78386 507 aa15.72■□□□□ 0.11
ACTR3-201ENST00000263238 TRIM34Q9BYJ4 488 aa15.71■□□□□ 0.11
ACTR3-201ENST00000263238 DEF6Q9H4E7 631 aa15.71■□□□□ 0.11
ACTR3-201ENST00000263238 LARP6Q9BRS8 491 aaKnown RBP15.71■□□□□ 0.11
ACTR3-201ENST00000263238 TNNT1P13805 278 aa15.71■□□□□ 0.11
ACTR3-201ENST00000263238 NEXNQ0ZGT2 675 aa15.71■□□□□ 0.11
ACTR3-201ENST00000263238 WASHC4Q2M389 1173 aa15.71■□□□□ 0.11
ACTR3-201ENST00000263238 FAM177BA6PVY3 158 aa15.71■□□□□ 0.11
ACTR3-201ENST00000263238 CYP46A1Q9Y6A2 500 aa15.71■□□□□ 0.11
ACTR3-201ENST00000263238 KIAA0754O94854 1291 aa15.71■□□□□ 0.1
ACTR3-201ENST00000263238 ADCY5O95622 1261 aa15.71■□□□□ 0.1
ACTR3-201ENST00000263238 PTPN14Q15678 1187 aa15.71■□□□□ 0.1
ACTR3-201ENST00000263238 STK38Q15208 465 aa15.7■□□□□ 0.1
ACTR3-201ENST00000263238 IGF1RP08069 1367 aa15.7■□□□□ 0.1
ACTR3-201ENST00000263238 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
ACTR3-201ENST00000263238 TMCO3Q6UWJ1 677 aa15.69■□□□□ 0.1
ACTR3-201ENST00000263238 RBM25P49756 843 aaKnown RBP15.69■□□□□ 0.1
ACTR3-201ENST00000263238 ANKRD50Q9ULJ7 1429 aa15.69■□□□□ 0.1
ACTR3-201ENST00000263238 CDR1P51861 262 aa15.69■□□□□ 0.1
ACTR3-201ENST00000263238 SAFBQ15424 915 aaKnown RBP eCLIP15.69■□□□□ 0.1
ACTR3-201ENST00000263238 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
ACTR3-201ENST00000263238 ZNF396Q96N95 335 aaPredicted RBP15.69■□□□□ 0.1
ACTR3-201ENST00000263238 PRM3Q9NNZ6 103 aa15.69■□□□□ 0.1
ACTR3-201ENST00000263238 MAP3K11Q16584 847 aa15.69■□□□□ 0.1
ACTR3-201ENST00000263238 CCDC183Q5T5S1 534 aa15.69■□□□□ 0.1
ACTR3-201ENST00000263238 UBXN4Q92575 508 aa15.69■□□□□ 0.1
ACTR3-201ENST00000263238 PDCP20941 246 aa15.68■□□□□ 0.1
ACTR3-201ENST00000263238 CCDC47Q96A33 483 aaKnown RBP15.68■□□□□ 0.1
ACTR3-201ENST00000263238 LRRCC1Q9C099 1032 aa15.68■□□□□ 0.1
ACTR3-201ENST00000263238 ERBINQ96RT1 1412 aa15.68■□□□□ 0.1
ACTR3-201ENST00000263238 RALYLQ86SE5 291 aaKnown RBP15.68■□□□□ 0.1
ACTR3-201ENST00000263238 FERMT3Q86UX7 667 aa15.68■□□□□ 0.1
ACTR3-201ENST00000263238 PDRG1Q9NUG6 133 aa15.68■□□□□ 0.1
ACTR3-201ENST00000263238 FYCO1Q9BQS8 1478 aa15.68■□□□□ 0.1
ACTR3-201ENST00000263238 BAG4O95429 457 aaKnown RBP15.68■□□□□ 0.1
ACTR3-201ENST00000263238 GNAI2P04899 355 aa15.68■□□□□ 0.1
ACTR3-201ENST00000263238 HSP90AB4PQ58FF6 505 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms