RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 MYBBP1AQ9BQG0 1328 aaKnown RBP25.18■■□□□ 1.62
COL4A3BP-201ENST00000261415 DCCP43146 1447 aa25.18■■□□□ 1.62
COL4A3BP-201ENST00000261415 EDC4Q6P2E9 1401 aaKnown RBP25.18■■□□□ 1.62
COL4A3BP-201ENST00000261415 ACEP12821 1306 aa25.17■■□□□ 1.62
COL4A3BP-201ENST00000261415 NSD2O96028 1365 aa25.17■■□□□ 1.62
COL4A3BP-201ENST00000261415 RTL5Q5HYW3 569 aaPredicted RBP25.16■■□□□ 1.62
COL4A3BP-201ENST00000261415 POLR3AO14802 1390 aaPredicted RBP25.15■■□□□ 1.62
COL4A3BP-201ENST00000261415 NBR1Q14596 966 aa25.15■■□□□ 1.62
COL4A3BP-201ENST00000261415 CCDC184Q52MB2 194 aa25.15■■□□□ 1.62
COL4A3BP-201ENST00000261415 ZNF692Q9BU19 519 aaPredicted RBP25.15■■□□□ 1.62
COL4A3BP-201ENST00000261415 PMFBP1Q8TBY8 1022 aa25.14■■□□□ 1.62
COL4A3BP-201ENST00000261415 USP6P35125 1406 aa25.13■■□□□ 1.61
COL4A3BP-201ENST00000261415 KIF1AQ12756 1690 aa25.13■■□□□ 1.61
COL4A3BP-201ENST00000261415 MSH6P52701 1360 aa25.13■■□□□ 1.61
COL4A3BP-201ENST00000261415 MRS2Q9HD23 443 aa25.11■■□□□ 1.61
COL4A3BP-201ENST00000261415 MST1RQ04912 1400 aa25.11■■□□□ 1.61
COL4A3BP-201ENST00000261415 ATF3P18847 181 aa25.1■■□□□ 1.61
COL4A3BP-201ENST00000261415 C1orf167Q5SNV9 1468 aa25.1■■□□□ 1.61
COL4A3BP-201ENST00000261415 FYB1O15117 783 aa25.1■■□□□ 1.61
COL4A3BP-201ENST00000261415 NLRP13Q86W25 1043 aa25.1■■□□□ 1.61
COL4A3BP-201ENST00000261415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.1■■□□□ 1.613e-10■■■■■ 33.9
COL4A3BP-201ENST00000261415 NGDNQ8NEJ9 315 aaKnown RBP25.1■■□□□ 1.61
COL4A3BP-201ENST00000261415 PHF8Q9UPP1 1060 aa25.09■■□□□ 1.61
COL4A3BP-201ENST00000261415 BRD4O60885 1362 aaPredicted RBP25.09■■□□□ 1.61
COL4A3BP-201ENST00000261415 AEBP2Q6ZN18 517 aaPredicted RBP25.08■■□□□ 1.61
COL4A3BP-201ENST00000261415 MORC1Q86VD1 984 aa25.08■■□□□ 1.61
COL4A3BP-201ENST00000261415 SSH2Q76I76 1423 aa25.08■■□□□ 1.61
COL4A3BP-201ENST00000261415 PPP2R1AP30153 589 aa25.07■■□□□ 1.6
COL4A3BP-201ENST00000261415 ESCO1Q5FWF5 840 aa25.07■■□□□ 1.6
COL4A3BP-201ENST00000261415 IL27Q8NEV9 243 aa25.07■■□□□ 1.6
COL4A3BP-201ENST00000261415 GGNBP2Q9H3C7 697 aa25.07■■□□□ 1.6
COL4A3BP-201ENST00000261415 LTBP4Q8N2S1 1624 aa25.07■■□□□ 1.6
COL4A3BP-201ENST00000261415 CADPS2Q86UW7 1296 aa25.07■■□□□ 1.6
COL4A3BP-201ENST00000261415 PIK3C2AO00443 1686 aa25.05■■□□□ 1.6
COL4A3BP-201ENST00000261415 MAP2P11137 1827 aaKnown RBP25.05■■□□□ 1.6
COL4A3BP-201ENST00000261415 PPP4R2Q9NY27 417 aa25.05■■□□□ 1.6
COL4A3BP-201ENST00000261415 TTC21BQ7Z4L5 1316 aa25.04■■□□□ 1.6
COL4A3BP-201ENST00000261415 ORAI2Q96SN7 254 aa25.04■■□□□ 1.6
COL4A3BP-201ENST00000261415 NME9Q86XW9 330 aa25.03■■□□□ 1.6
COL4A3BP-201ENST00000261415 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.02■■□□□ 1.6
COL4A3BP-201ENST00000261415 MARF1Q9Y4F3 1742 aaKnown RBP25.02■■□□□ 1.6
COL4A3BP-201ENST00000261415 USP54Q70EL1 1684 aa25.01■■□□□ 1.59
COL4A3BP-201ENST00000261415 TNNT2P45379 298 aaPredicted RBP25.01■■□□□ 1.59
COL4A3BP-201ENST00000261415 TRPM3Q9HCF6 1732 aaPredicted RBP25■■□□□ 1.59
COL4A3BP-201ENST00000261415 TTC21AQ8NDW8 1320 aa25■■□□□ 1.59
COL4A3BP-201ENST00000261415 ZRANB1Q9UGI0 708 aa24.97■■□□□ 1.59
COL4A3BP-201ENST00000261415 OVOS2A0A0J9YW53 1432 aa24.97■■□□□ 1.59
COL4A3BP-201ENST00000261415 OVOS2Q6IE36 1432 aa24.97■■□□□ 1.59
COL4A3BP-201ENST00000261415 PAK3O75914 559 aaPredicted RBP24.96■■□□□ 1.59
COL4A3BP-201ENST00000261415 COG3Q96JB2 828 aa24.95■■□□□ 1.58
COL4A3BP-201ENST00000261415 FOXO3O43524 673 aa24.95■■□□□ 1.58
COL4A3BP-201ENST00000261415 PSME1Q06323 249 aa24.95■■□□□ 1.58
COL4A3BP-201ENST00000261415 FAM9BQ8IZU0 186 aa24.94■■□□□ 1.58
COL4A3BP-201ENST00000261415 PNISRQ8TF01 805 aaKnown RBP24.94■■□□□ 1.58
COL4A3BP-201ENST00000261415 EIF5BO60841 1220 aaKnown RBP24.93■■□□□ 1.58
COL4A3BP-201ENST00000261415 RTN4Q9NQC3 1192 aaKnown RBP24.93■■□□□ 1.58
COL4A3BP-201ENST00000261415 SHPRHQ149N8 1683 aa24.93■■□□□ 1.58
COL4A3BP-201ENST00000261415 ALS2Q96Q42 1657 aa24.91■■□□□ 1.58
COL4A3BP-201ENST00000261415 USP31Q70CQ4 1352 aa24.91■■□□□ 1.58
COL4A3BP-201ENST00000261415 SLAIN2Q9P270 581 aa24.91■■□□□ 1.58
COL4A3BP-201ENST00000261415 MTHFSP49914 203 aa24.89■■□□□ 1.58
COL4A3BP-201ENST00000261415 IPO9Q96P70 1041 aaKnown RBP24.89■■□□□ 1.57
COL4A3BP-201ENST00000261415 XPCQ01831 940 aaPredicted RBP24.88■■□□□ 1.57
COL4A3BP-201ENST00000261415 PKNOX2Q96KN3 472 aa24.88■■□□□ 1.57
COL4A3BP-201ENST00000261415 AATKQ6ZMQ8 1374 aa24.88■■□□□ 1.57
COL4A3BP-201ENST00000261415 NHSL1Q5SYE7 1610 aa24.88■■□□□ 1.57
COL4A3BP-201ENST00000261415 ANP32AP39687 249 aaKnown RBP24.87■■□□□ 1.57
COL4A3BP-201ENST00000261415 BRINP3Q76B58 766 aa24.87■■□□□ 1.57
COL4A3BP-201ENST00000261415 ABTB2Q8N961 1025 aa24.87■■□□□ 1.57
COL4A3BP-201ENST00000261415 KRT28Q7Z3Y7 464 aa24.86■■□□□ 1.57
COL4A3BP-201ENST00000261415 PXDNQ92626 1479 aa24.86■■□□□ 1.57
COL4A3BP-201ENST00000261415 NPHP3Q7Z494 1330 aa24.86■■□□□ 1.57
COL4A3BP-201ENST00000261415 FBLN1P23142 703 aa24.86■■□□□ 1.57
COL4A3BP-201ENST00000261415 SMG6Q86US8 1419 aaKnown RBP24.85■■□□□ 1.57
COL4A3BP-201ENST00000261415 NLRP6P59044 892 aa24.85■■□□□ 1.57
COL4A3BP-201ENST00000261415 USP35Q9P2H5 1018 aa24.85■■□□□ 1.57
COL4A3BP-201ENST00000261415 ZBTB47Q9UFB7 747 aaPredicted RBP24.85■■□□□ 1.57
COL4A3BP-201ENST00000261415 LTN1O94822 1766 aa24.84■■□□□ 1.57
COL4A3BP-201ENST00000261415 DDX17Q92841 729 aaKnown RBP24.84■■□□□ 1.57
COL4A3BP-201ENST00000261415 COL3A1P02461 1466 aaPredicted RBP24.83■■□□□ 1.57
COL4A3BP-201ENST00000261415 ROBO1Q9Y6N7 1651 aa24.83■■□□□ 1.57
COL4A3BP-201ENST00000261415 NUTM2GQ5VZR2 741 aa24.83■■□□□ 1.57
COL4A3BP-201ENST00000261415 POLKQ9UBT6 870 aa24.83■■□□□ 1.57
COL4A3BP-201ENST00000261415 CFAP53Q96M91 514 aa24.82■■□□□ 1.56
COL4A3BP-201ENST00000261415 PEAK1Q9H792 1746 aa24.82■■□□□ 1.56
COL4A3BP-201ENST00000261415 IRX6P78412 446 aaPredicted RBP24.82■■□□□ 1.56
COL4A3BP-201ENST00000261415 CDK12Q9NYV4 1490 aaPredicted RBP24.81■■□□□ 1.56
COL4A3BP-201ENST00000261415 SBNO1A3KN83 1393 aa24.8■■□□□ 1.56
COL4A3BP-201ENST00000261415 EMILIN1Q9Y6C2 1016 aa24.79■■□□□ 1.56
COL4A3BP-201ENST00000261415 PNPLA6Q8IY17 1366 aa24.79■■□□□ 1.56
COL4A3BP-201ENST00000261415 RRS1Q15050 365 aaKnown RBP24.79■■□□□ 1.56
COL4A3BP-201ENST00000261415 WDR43Q15061 677 aaKnown RBP eCLIP24.79■■□□□ 1.56
COL4A3BP-201ENST00000261415 CRYBG1Q9Y4K1 1723 aa24.78■■□□□ 1.56
COL4A3BP-201ENST00000261415 SLIT3O75094 1523 aa24.77■■□□□ 1.56
COL4A3BP-201ENST00000261415 NFAT5O94916 1531 aa24.77■■□□□ 1.56
COL4A3BP-201ENST00000261415 SOX12O15370 315 aa24.77■■□□□ 1.56
COL4A3BP-201ENST00000261415 TNS3Q68CZ2 1445 aa24.77■■□□□ 1.56
COL4A3BP-201ENST00000261415 PPM1GO15355 546 aaPredicted RBP24.77■■□□□ 1.56
COL4A3BP-201ENST00000261415 PHRF1Q9P1Y6 1649 aaKnown RBP24.77■■□□□ 1.56
COL4A3BP-201ENST00000261415 INSRP06213 1382 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms