RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NRKQ7Z2Y5 1582 aa29.71■■■□□ 2.35
SIX3-201ENST00000260653 ZRANB1Q9UGI0 708 aa29.7■■■□□ 2.34
SIX3-201ENST00000260653 FMN2Q9NZ56 1722 aa29.69■■■□□ 2.34
SIX3-201ENST00000260653 USP6P35125 1406 aa29.67■■■□□ 2.34
SIX3-201ENST00000260653 PMFBP1Q8TBY8 1022 aa29.67■■■□□ 2.34
SIX3-201ENST00000260653 KDM4FA0A1W2PPD8 638 aa29.67■■■□□ 2.34
SIX3-201ENST00000260653 FBLN1P23142 703 aa29.66■■■□□ 2.34
SIX3-201ENST00000260653 COL3A1P02461 1466 aaPredicted RBP29.66■■■□□ 2.34
SIX3-201ENST00000260653 ANKARQ7Z5J8 1434 aa29.66■■■□□ 2.34
SIX3-201ENST00000260653 PDE3BQ13370 1112 aa29.66■■■□□ 2.34
SIX3-201ENST00000260653 CDCA7LQ96GN5 454 aa29.65■■■□□ 2.34
SIX3-201ENST00000260653 TTC21BQ7Z4L5 1316 aa29.64■■■□□ 2.34
SIX3-201ENST00000260653 NWD1Q149M9 1564 aa29.64■■■□□ 2.33
SIX3-201ENST00000260653 APAF1O14727 1248 aa29.64■■■□□ 2.33
SIX3-201ENST00000260653 COG3Q96JB2 828 aa29.63■■■□□ 2.33
SIX3-201ENST00000260653 MAP2P11137 1827 aaKnown RBP29.62■■■□□ 2.33
SIX3-201ENST00000260653 ADGRL3Q9HAR2 1447 aa29.62■■■□□ 2.33
SIX3-201ENST00000260653 HSPA2P54652 639 aa29.61■■■□□ 2.33
SIX3-201ENST00000260653 POLKQ9UBT6 870 aa29.61■■■□□ 2.33
SIX3-201ENST00000260653 SSH2Q76I76 1423 aa29.6■■■□□ 2.33
SIX3-201ENST00000260653 PNPLA6Q8IY17 1366 aa29.6■■■□□ 2.33
SIX3-201ENST00000260653 NGDNQ8NEJ9 315 aaKnown RBP29.6■■■□□ 2.33
SIX3-201ENST00000260653 ZNF521Q96K83 1311 aa29.58■■■□□ 2.33
SIX3-201ENST00000260653 U2AF1L5P0DN76 240 aaPredicted RBP29.58■■■□□ 2.33
SIX3-201ENST00000260653 IRX6P78412 446 aaPredicted RBP29.58■■■□□ 2.33
SIX3-201ENST00000260653 U2AF1Q01081 240 aaKnown RBP eCLIP29.58■■■□□ 2.33
SIX3-201ENST00000260653 PPM1GO15355 546 aaPredicted RBP29.57■■■□□ 2.32
SIX3-201ENST00000260653 EMILIN1Q9Y6C2 1016 aa29.55■■■□□ 2.32
SIX3-201ENST00000260653 AATKQ6ZMQ8 1374 aa29.55■■■□□ 2.32
SIX3-201ENST00000260653 RUNDC1Q96C34 613 aa29.55■■■□□ 2.32
SIX3-201ENST00000260653 OVOS2A0A0J9YW53 1432 aa29.55■■■□□ 2.32
SIX3-201ENST00000260653 OVOS2Q6IE36 1432 aa29.55■■■□□ 2.32
SIX3-201ENST00000260653 C14orf37Q86TY3 774 aa29.54■■■□□ 2.32
SIX3-201ENST00000260653 U2SURPO15042 1029 aaKnown RBP29.53■■■□□ 2.32
SIX3-201ENST00000260653 IQSEC2Q5JU85 1478 aa29.53■■■□□ 2.32
SIX3-201ENST00000260653 DIAPH1O60610 1272 aaKnown RBP29.52■■■□□ 2.32
SIX3-201ENST00000260653 RRS1Q15050 365 aaKnown RBP29.51■■■□□ 2.31
SIX3-201ENST00000260653 TTC21AQ8NDW8 1320 aa29.51■■■□□ 2.31
SIX3-201ENST00000260653 LMTK3Q96Q04 1460 aa29.51■■■□□ 2.31
SIX3-201ENST00000260653 PROSER2Q86WR7 435 aaPredicted RBP29.49■■■□□ 2.31
SIX3-201ENST00000260653 CDK12Q9NYV4 1490 aaPredicted RBP29.49■■■□□ 2.31
SIX3-201ENST00000260653 GOLGA2Q08379 1002 aa29.48■■■□□ 2.31
SIX3-201ENST00000260653 TCP11L2Q8N4U5 519 aa29.48■■■□□ 2.31
SIX3-201ENST00000260653 NGEFQ8N5V2 710 aa29.47■■■□□ 2.31
SIX3-201ENST00000260653 PHF8Q9UPP1 1060 aa29.47■■■□□ 2.31
SIX3-201ENST00000260653 RRP7AQ9Y3A4 280 aaKnown RBP29.47■■■□□ 2.31
SIX3-201ENST00000260653 STRCP1A6NGW2 1772 aa29.46■■■□□ 2.31
SIX3-201ENST00000260653 PIK3C2AO00443 1686 aa29.46■■■□□ 2.31
SIX3-201ENST00000260653 RNF123Q5XPI4 1314 aa29.46■■■□□ 2.31
SIX3-201ENST00000260653 NEUROD2Q15784 382 aa29.45■■■□□ 2.3
SIX3-201ENST00000260653 USP31Q70CQ4 1352 aa29.44■■■□□ 2.3
SIX3-201ENST00000260653 DUSP27Q5VZP5 1158 aa29.43■■■□□ 2.3
SIX3-201ENST00000260653 RCAN3Q9UKA8 241 aa29.43■■■□□ 2.3
SIX3-201ENST00000260653 WWC1Q8IX03 1113 aa29.42■■■□□ 2.3
SIX3-201ENST00000260653 PLEKHF1Q96S99 279 aa29.42■■■□□ 2.3
SIX3-201ENST00000260653 DMRT2Q9Y5R5 561 aa29.42■■■□□ 2.3
SIX3-201ENST00000260653 ESCO1Q5FWF5 840 aa29.42■■■□□ 2.3
SIX3-201ENST00000260653 SPINK5Q9NQ38 1064 aaPredicted RBP29.42■■■□□ 2.3
SIX3-201ENST00000260653 ERICH6Q7L0X2 663 aa29.41■■■□□ 2.3
SIX3-201ENST00000260653 SLFN5Q08AF3 891 aa29.41■■■□□ 2.3
SIX3-201ENST00000260653 SOX12O15370 315 aa29.4■■■□□ 2.3
SIX3-201ENST00000260653 STRCQ7RTU9 1775 aa29.39■■■□□ 2.3
SIX3-201ENST00000260653 IL13P35225 146 aa29.39■■■□□ 2.3
SIX3-201ENST00000260653 LRRC7Q96NW7 1537 aa29.38■■■□□ 2.29
SIX3-201ENST00000260653 TMEM94Q12767 1356 aa29.38■■■□□ 2.29
SIX3-201ENST00000260653 PHF23Q9BUL5 403 aaPredicted RBP29.37■■■□□ 2.29
SIX3-201ENST00000260653 PAK3O75914 559 aaPredicted RBP29.37■■■□□ 2.29
SIX3-201ENST00000260653 PEAK1Q9H792 1746 aa29.37■■■□□ 2.29
SIX3-201ENST00000260653 TRMT2AQ8IZ69 625 aaKnown RBP29.36■■■□□ 2.29
SIX3-201ENST00000260653 ORAI2Q96SN7 254 aa29.36■■■□□ 2.29
SIX3-201ENST00000260653 C19orf44Q9H6X5 657 aa29.36■■■□□ 2.29
SIX3-201ENST00000260653 NLRP6P59044 892 aa29.36■■■□□ 2.29
SIX3-201ENST00000260653 MARF1Q9Y4F3 1742 aaKnown RBP29.35■■■□□ 2.29
SIX3-201ENST00000260653 MAPK8IP3Q9UPT6 1336 aa29.35■■■□□ 2.29
SIX3-201ENST00000260653 NUTM2GQ5VZR2 741 aa29.35■■■□□ 2.29
SIX3-201ENST00000260653 E9PSI1 815 aa29.34■■■□□ 2.29
SIX3-201ENST00000260653 FCHSD2O94868 740 aa29.34■■■□□ 2.29
SIX3-201ENST00000260653 RSPH6AQ9H0K4 717 aa29.34■■■□□ 2.29
SIX3-201ENST00000260653 ABTB2Q8N961 1025 aa29.33■■■□□ 2.29
SIX3-201ENST00000260653 CCDC27Q2M243 656 aa29.33■■■□□ 2.29
SIX3-201ENST00000260653 HMOX1P09601 288 aa29.32■■■□□ 2.28
SIX3-201ENST00000260653 USP54Q70EL1 1684 aa29.32■■■□□ 2.28
SIX3-201ENST00000260653 RRP1P56182 461 aaKnown RBP29.32■■■□□ 2.28
SIX3-201ENST00000260653 ERICH6BQ5W0A0 696 aa29.31■■■□□ 2.28
SIX3-201ENST00000260653 MAP3K19Q56UN5 1328 aa29.31■■■□□ 2.28
SIX3-201ENST00000260653 PRKAR2BP31323 418 aa29.31■■■□□ 2.28
SIX3-201ENST00000260653 TMPOP42166 694 aaKnown RBP29.31■■■□□ 2.28
SIX3-201ENST00000260653 PSME1Q06323 249 aa29.31■■■□□ 2.28
SIX3-201ENST00000260653 PNNQ9H307 717 aaKnown RBP29.31■■■□□ 2.28
SIX3-201ENST00000260653 C1orf167Q5SNV9 1468 aa29.31■■■□□ 2.28
SIX3-201ENST00000260653 NCBP3Q53F19 620 aaKnown RBP29.3■■■□□ 2.28
SIX3-201ENST00000260653 EIF4A2Q14240 407 aaKnown RBP29.28■■■□□ 2.28
SIX3-201ENST00000260653 HSP90AB2PQ58FF8 381 aa29.28■■■□□ 2.28
SIX3-201ENST00000260653 FOXO3O43524 673 aa29.28■■■□□ 2.28
SIX3-201ENST00000260653 WDR63Q8IWG1 891 aa29.27■■■□□ 2.28
SIX3-201ENST00000260653 NCOA3Q9Y6Q9 1424 aa29.26■■■□□ 2.28
SIX3-201ENST00000260653 ATF3P18847 181 aa29.25■■■□□ 2.27
SIX3-201ENST00000260653 XPCQ01831 940 aaPredicted RBP29.25■■■□□ 2.27
SIX3-201ENST00000260653 DCCP43146 1447 aa29.25■■■□□ 2.27
SIX3-201ENST00000260653 SBNO1A3KN83 1393 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms