RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 NUDT12Q9BQG2 462 aa8.08□□□□□ -1.12
HMGB1P5-201ENST00000255320 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
HMGB1P5-201ENST00000255320 EVA1BQ9NVM1 165 aa8.07□□□□□ -1.12
HMGB1P5-201ENST00000255320 ZBBXA8MT70 800 aa8.06□□□□□ -1.12
HMGB1P5-201ENST00000255320 CTHP32929 405 aa8.06□□□□□ -1.12
HMGB1P5-201ENST00000255320 TJAP1Q5JTD0 557 aa8.06□□□□□ -1.12
HMGB1P5-201ENST00000255320 CDAN1Q8IWY9 1227 aa8.06□□□□□ -1.12
HMGB1P5-201ENST00000255320 RETREG2Q8NC44 543 aa8.06□□□□□ -1.12
HMGB1P5-201ENST00000255320 PALM3A6NDB9 673 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P5-201ENST00000255320 PPP1R15AO75807 674 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P5-201ENST00000255320 SRPK2P78362 688 aaKnown RBP8.05□□□□□ -1.12
HMGB1P5-201ENST00000255320 KCNH2Q12809 1159 aa8.05□□□□□ -1.12
HMGB1P5-201ENST00000255320 POTEGQ6S5H5 508 aa8.05□□□□□ -1.12
HMGB1P5-201ENST00000255320 OCSTAMPQ9BR26 566 aa8.05□□□□□ -1.12
HMGB1P5-201ENST00000255320 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P5-201ENST00000255320 PDIA4P13667 645 aaKnown RBP8.04□□□□□ -1.12
HMGB1P5-201ENST00000255320 PTPN5P54829 565 aa8.04□□□□□ -1.12
HMGB1P5-201ENST00000255320 EIF4G2P78344 907 aaKnown RBP eCLIP8.04□□□□□ -1.12
HMGB1P5-201ENST00000255320 TRIM26Q12899 539 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P5-201ENST00000255320 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
HMGB1P5-201ENST00000255320 ZNF516Q92618 1163 aa8.04□□□□□ -1.12
HMGB1P5-201ENST00000255320 PBXIP1Q96AQ6 731 aa8.04□□□□□ -1.12
HMGB1P5-201ENST00000255320 IL21Q9HBE4 155 aa8.03□□□□□ -1.12
HMGB1P5-201ENST00000255320 MYT1LQ9UL68 1186 aa8.03□□□□□ -1.12
HMGB1P5-201ENST00000255320 GPKOWQ92917 476 aaPredicted RBP eCLIP8.02□□□□□ -1.13
HMGB1P5-201ENST00000255320 TRAIPQ9BWF2 469 aa8.02□□□□□ -1.13
HMGB1P5-201ENST00000255320 MAFBQ9Y5Q3 323 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P5-201ENST00000255320 RFX1P22670 979 aa8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 NBPF14Q5TI25 921 aa8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 PTCRAQ6ISU1 281 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 PDXDC2PQ6P474 469 aa8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 TBC1D9Q6ZT07 1266 aa8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 ARMC2Q8NEN0 867 aa8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 SLC6A16Q9GZN6 736 aa8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 UNC93B1Q9H1C4 597 aa8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 TFIP11Q9UBB9 837 aaKnown RBP8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
HMGB1P5-201ENST00000255320 PIK3CDO00329 1044 aa8□□□□□ -1.13
HMGB1P5-201ENST00000255320 ATP9BO43861 1147 aa7.99□□□□□ -1.13
HMGB1P5-201ENST00000255320 LMOD1P29536 600 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P5-201ENST00000255320 SH3BP5LQ7L8J4 393 aa7.99□□□□□ -1.13
HMGB1P5-201ENST00000255320 NKX2-3Q8TAU0 364 aa7.99□□□□□ -1.13
HMGB1P5-201ENST00000255320 S1PR4O95977 384 aa7.98□□□□□ -1.13
HMGB1P5-201ENST00000255320 PTK2Q05397 1052 aa7.98□□□□□ -1.13
HMGB1P5-201ENST00000255320 CCDC24Q8N4L8 307 aa7.98□□□□□ -1.13
HMGB1P5-201ENST00000255320 NFATC2IPQ8NCF5 419 aa7.97□□□□□ -1.13
HMGB1P5-201ENST00000255320 FAM174AQ8TBP5 190 aa7.97□□□□□ -1.13
HMGB1P5-201ENST00000255320 PODXL2Q9NZ53 605 aa7.97□□□□□ -1.13
HMGB1P5-201ENST00000255320 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
HMGB1P5-201ENST00000255320 ADAM32Q8TC27 787 aa7.96□□□□□ -1.14
HMGB1P5-201ENST00000255320 ARHGAP9Q9BRR9 750 aa7.96□□□□□ -1.14
HMGB1P5-201ENST00000255320 FCF1Q9Y324 198 aaKnown RBP7.96□□□□□ -1.14
HMGB1P5-201ENST00000255320 PCDHB9Q9Y5E1 797 aa7.95□□□□□ -1.14
HMGB1P5-201ENST00000255320 USP17L3A6NCW0 530 aa7.94□□□□□ -1.14
HMGB1P5-201ENST00000255320 USP17L4A6NCW7 530 aa7.94□□□□□ -1.14
HMGB1P5-201ENST00000255320 USP17L5A8MUK1 530 aa7.94□□□□□ -1.14
HMGB1P5-201ENST00000255320 ATG7O95352 703 aa7.94□□□□□ -1.14
HMGB1P5-201ENST00000255320 USP17L2Q6R6M4 530 aa7.94□□□□□ -1.14
HMGB1P5-201ENST00000255320 USP17L1Q7RTZ2 530 aa7.94□□□□□ -1.14
HMGB1P5-201ENST00000255320 CEP126Q9P2H0 1117 aa7.94□□□□□ -1.14
HMGB1P5-201ENST00000255320 USTQ9Y2C2 406 aa7.94□□□□□ -1.14
HMGB1P5-201ENST00000255320 ITGBL1O95965 494 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P5-201ENST00000255320 C4orf48Q5BLP8 95 aa7.93□□□□□ -1.14
HMGB1P5-201ENST00000255320 KANK4Q5T7N3 995 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P5-201ENST00000255320 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
HMGB1P5-201ENST00000255320 PHTF2Q8N3S3 785 aa7.93□□□□□ -1.14
HMGB1P5-201ENST00000255320 ACIN1Q9UKV3 1341 aaKnown RBP7.93□□□□□ -1.14
HMGB1P5-201ENST00000255320 SKIP12755 728 aa7.92□□□□□ -1.14
HMGB1P5-201ENST00000255320 MCCD1P59942 119 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P5-201ENST00000255320 LINC01559Q495D7 138 aa7.92□□□□□ -1.14
HMGB1P5-201ENST00000255320 CDCA8Q53HL2 280 aa7.92□□□□□ -1.14
HMGB1P5-201ENST00000255320 ZNF511Q8NB15 262 aa7.92□□□□□ -1.14
HMGB1P5-201ENST00000255320 BAP1Q92560 729 aa7.92□□□□□ -1.14
HMGB1P5-201ENST00000255320 ZNF592Q92610 1267 aa7.92□□□□□ -1.14
HMGB1P5-201ENST00000255320 CHIC2Q9UKJ5 165 aa7.92□□□□□ -1.14
HMGB1P5-201ENST00000255320 ERFEQ4G0M1 354 aa7.91□□□□□ -1.14
HMGB1P5-201ENST00000255320 ZBTB33Q86T24 672 aa7.91□□□□□ -1.14
HMGB1P5-201ENST00000255320 FOXJ1Q92949 421 aa7.91□□□□□ -1.14
HMGB1P5-201ENST00000255320 CARD14Q9BXL6 1004 aa7.91□□□□□ -1.14
HMGB1P5-201ENST00000255320 MAGEB6P1A0A0J9YX57 407 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 CARNS1A5YM72 827 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 TMEM88BA6NKF7 163 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 PPEF1O14829 653 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 CSB-PGBD3P0DP91 1061 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 SLFNL1Q499Z3 407 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 RNF135Q8IUD6 432 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 DEPDC4Q8N2C3 294 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 KCTD17Q8N5Z5 321 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 C1QTNF2Q9BXJ5 285 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 ZMIZ1Q9ULJ6 1067 aa7.9□□□□□ -1.14
HMGB1P5-201ENST00000255320 ZBTB7CA1YPR0 619 aa7.89□□□□□ -1.15
HMGB1P5-201ENST00000255320 NCOA4Q13772 614 aa7.89□□□□□ -1.15
HMGB1P5-201ENST00000255320 PLA2G2CQ5R387 149 aa7.89□□□□□ -1.15
HMGB1P5-201ENST00000255320 TRAF7Q6Q0C0 670 aa7.89□□□□□ -1.15
HMGB1P5-201ENST00000255320 BPHLQ86WA6 291 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P5-201ENST00000255320 PLPP7Q8NBV4 271 aa7.89□□□□□ -1.15
HMGB1P5-201ENST00000255320 RNF166Q96A37 237 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P5-201ENST00000255320 VRTNQ9H8Y1 702 aa7.89□□□□□ -1.15
HMGB1P5-201ENST00000255320 HCSTQ9UBK5 93 aa7.89□□□□□ -1.15
HMGB1P5-201ENST00000255320 RNF223E7ERA6 249 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms