RNA–Protein interactions for RNA: ENST00000252458.6

CDC16-202, Transcript of cell division cycle 16, humanhuman

TSL 1 (best) BASIC

Gene CDC16, Length 1,991 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-202ENST00000252458 USP17L13C9JLJ4 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L11C9JVI0 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L21D6R901 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L18D6R9N7 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L22D6RA61 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L17D6RBQ6 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L19D6RCP7 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L20D6RJB6 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 PSEN2P49810 448 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L24Q0WX57 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 PUS10Q3MIT2 529 aaKnown RBP9.33□□□□□ -0.92
CDC16-202ENST00000252458 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 FAM174AQ8TBP5 190 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 FKBPLQ9UIM3 349 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 POTEB2H3BUK9 544 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 FAM98CQ17RN3 349 aaKnown RBP9.33□□□□□ -0.92
CDC16-202ENST00000252458 DNAJC14Q6Y2X3 702 aaPredicted RBP9.33□□□□□ -0.92
CDC16-202ENST00000252458 SLAIN2Q9P270 581 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 SLC27A5Q9Y2P5 690 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 MORN1Q5T089 497 aa9.32□□□□□ -0.92
CDC16-202ENST00000252458 RASA1P20936 1047 aa9.32□□□□□ -0.92
CDC16-202ENST00000252458 PTK7Q13308 1070 aa9.31□□□□□ -0.92
CDC16-202ENST00000252458 NCOA4Q13772 614 aa9.31□□□□□ -0.92
CDC16-202ENST00000252458 Q3C1V9 767 aa9.31□□□□□ -0.92
CDC16-202ENST00000252458 KMT5BQ4FZB7 885 aa9.31□□□□□ -0.92
CDC16-202ENST00000252458 LARP1Q6PKG0 1096 aaKnown RBP9.31□□□□□ -0.92
CDC16-202ENST00000252458 FAM200AQ8TCP9 573 aa9.31□□□□□ -0.92
CDC16-202ENST00000252458 ERCC3P19447 782 aa9.3□□□□□ -0.92
CDC16-202ENST00000252458 SERPINB4P48594 390 aa9.3□□□□□ -0.92
CDC16-202ENST00000252458 FAM69CQ0P6D2 419 aa9.3□□□□□ -0.92
CDC16-202ENST00000252458 MRRFQ96E11 262 aaKnown RBP9.3□□□□□ -0.92
CDC16-202ENST00000252458 SOWAHDA6NJG2 315 aa9.3□□□□□ -0.92
CDC16-202ENST00000252458 IGSF5Q9NSI5 407 aa9.3□□□□□ -0.92
CDC16-202ENST00000252458 KIAA1522Q9P206 1035 aaPredicted RBP9.29□□□□□ -0.92
CDC16-202ENST00000252458 CLP1Q92989 425 aaKnown RBP9.28□□□□□ -0.92
CDC16-202ENST00000252458 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
CDC16-202ENST00000252458 SLFNL1Q499Z3 407 aa9.28□□□□□ -0.92
CDC16-202ENST00000252458 NOM1Q5C9Z4 860 aaKnown RBP9.28□□□□□ -0.92
CDC16-202ENST00000252458 RNF19BQ6ZMZ0 732 aa9.28□□□□□ -0.92
CDC16-202ENST00000252458 MAP10Q9P2G4 905 aa9.28□□□□□ -0.92
CDC16-202ENST00000252458 CEP126Q9P2H0 1117 aa9.27□□□□□ -0.93
CDC16-202ENST00000252458 F12P00748 615 aaPredicted RBP9.26□□□□□ -0.93
CDC16-202ENST00000252458 ATP2B4P23634 1241 aa9.26□□□□□ -0.93
CDC16-202ENST00000252458 SCNN1AP37088 669 aa9.26□□□□□ -0.93
CDC16-202ENST00000252458 BLOC1S3Q6QNY0 202 aa9.26□□□□□ -0.93
CDC16-202ENST00000252458 ANKMY2Q8IV38 441 aa9.26□□□□□ -0.93
CDC16-202ENST00000252458 USB1Q9BQ65 265 aaKnown RBP9.26□□□□□ -0.93
CDC16-202ENST00000252458 CDCA7Q9BWT1 371 aaPredicted RBP9.26□□□□□ -0.93
CDC16-202ENST00000252458 BCL2L13Q9BXK5 485 aa9.26□□□□□ -0.93
CDC16-202ENST00000252458 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
CDC16-202ENST00000252458 ZNF16P17020 682 aaPredicted RBP9.26□□□□□ -0.93
CDC16-202ENST00000252458 MARSP56192 900 aaKnown RBP9.26□□□□□ -0.93
CDC16-202ENST00000252458 RNF135Q8IUD6 432 aa9.26□□□□□ -0.93
CDC16-202ENST00000252458 SIRT1Q96EB6 747 aa9.26□□□□□ -0.93
CDC16-202ENST00000252458 BIN2Q9UBW5 565 aaPredicted RBP9.26□□□□□ -0.93
CDC16-202ENST00000252458 ZC3H4Q9UPT8 1303 aaKnown RBP9.26□□□□□ -0.93
CDC16-202ENST00000252458 ARHGAP33O14559 1287 aa9.25□□□□□ -0.93
CDC16-202ENST00000252458 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
CDC16-202ENST00000252458 KCNH2Q12809 1159 aa9.25□□□□□ -0.93
CDC16-202ENST00000252458 PLPP7Q8NBV4 271 aa9.25□□□□□ -0.93
CDC16-202ENST00000252458 DPYDQ12882 1025 aa9.24□□□□□ -0.93
CDC16-202ENST00000252458 CTHP32929 405 aa9.23□□□□□ -0.93
CDC16-202ENST00000252458 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
CDC16-202ENST00000252458 OGFOD1Q8N543 542 aa9.23□□□□□ -0.93
CDC16-202ENST00000252458 GIPC2Q8TF65 315 aa9.23□□□□□ -0.93
CDC16-202ENST00000252458 ZNF594Q96JF6 807 aaPredicted RBP9.23□□□□□ -0.93
CDC16-202ENST00000252458 PCDHB9Q9Y5E1 797 aa9.23□□□□□ -0.93
CDC16-202ENST00000252458 SWI5Q1ZZU3 235 aa9.22□□□□□ -0.93
CDC16-202ENST00000252458 POTEEQ6S8J3 1075 aa9.22□□□□□ -0.93
CDC16-202ENST00000252458 LAPTM4BQ86VI4 370 aa9.22□□□□□ -0.93
CDC16-202ENST00000252458 PHTF2Q8N3S3 785 aa9.22□□□□□ -0.93
CDC16-202ENST00000252458 AXIN2Q9Y2T1 843 aa9.22□□□□□ -0.93
CDC16-202ENST00000252458 LZTS3O60299 673 aaPredicted RBP9.21□□□□□ -0.93
CDC16-202ENST00000252458 CLDN10P78369 228 aa9.21□□□□□ -0.93
CDC16-202ENST00000252458 PTPRNQ16849 979 aa9.21□□□□□ -0.93
CDC16-202ENST00000252458 EML3Q32P44 896 aa9.21□□□□□ -0.93
CDC16-202ENST00000252458 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.93
CDC16-202ENST00000252458 VPS9D1Q9Y2B5 631 aa9.21□□□□□ -0.93
CDC16-202ENST00000252458 PTK2Q05397 1052 aa9.21□□□□□ -0.94
CDC16-202ENST00000252458 BRICD5Q6PL45 260 aa9.21□□□□□ -0.94
CDC16-202ENST00000252458 ZNF592Q92610 1267 aa9.21□□□□□ -0.94
CDC16-202ENST00000252458 ANKRD33BA6NCL7 494 aa9.2□□□□□ -0.94
CDC16-202ENST00000252458 OCSTAMPQ9BR26 566 aa9.2□□□□□ -0.94
CDC16-202ENST00000252458 NBPF3Q9H094 633 aa9.2□□□□□ -0.94
CDC16-202ENST00000252458 GPSM3Q9Y4H4 160 aa9.2□□□□□ -0.94
CDC16-202ENST00000252458 ERBB3P21860 1342 aa9.19□□□□□ -0.94
CDC16-202ENST00000252458 SALL2Q9Y467 1007 aaPredicted RBP9.19□□□□□ -0.94
CDC16-202ENST00000252458 JUNDP17535 347 aa9.19□□□□□ -0.94
CDC16-202ENST00000252458 MAP7D1Q3KQU3 841 aa9.19□□□□□ -0.94
CDC16-202ENST00000252458 PDXDC2PQ6P474 469 aa9.19□□□□□ -0.94
CDC16-202ENST00000252458 PRMT3O60678 531 aa9.18□□□□□ -0.94
CDC16-202ENST00000252458 PBX2P40425 430 aa9.18□□□□□ -0.94
CDC16-202ENST00000252458 MCCD1P59942 119 aaPredicted RBP9.18□□□□□ -0.94
CDC16-202ENST00000252458 TSGA10IPQ3SY00 556 aa9.18□□□□□ -0.94
CDC16-202ENST00000252458 DNAAF2Q9NVR5 837 aaKnown RBP9.18□□□□□ -0.94
CDC16-202ENST00000252458 ABL1P00519 1130 aa9.17□□□□□ -0.94
CDC16-202ENST00000252458 VARS2Q5ST30 1063 aaKnown RBP9.17□□□□□ -0.94
CDC16-202ENST00000252458 TRAF7Q6Q0C0 670 aa9.17□□□□□ -0.94
CDC16-202ENST00000252458 NPAS4Q8IUM7 802 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms