RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 KIAA1328Q86T90 577 aa10.24□□□□□ -0.77
USP6-201ENST00000250066 UBE4AQ14139 1066 aa10.24□□□□□ -0.77
USP6-201ENST00000250066 KDM4AO75164 1064 aa10.24□□□□□ -0.77
USP6-201ENST00000250066 SYTL4Q96C24 671 aaPredicted RBP10.24□□□□□ -0.77
USP6-201ENST00000250066 SMC1AQ14683 1233 aaKnown RBP10.24□□□□□ -0.77
USP6-201ENST00000250066 MAP9Q49MG5 647 aa10.24□□□□□ -0.77
USP6-201ENST00000250066 UQCRHLA0A096LP55 91 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 UQCRHP07919 91 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 CEP162Q5TB80 1403 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 TRAK2O60296 914 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 CCDC192P0DO97 292 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 FAM107BQ9H098 131 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 PDS5BQ9NTI5 1447 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 C22orf23Q9BZE7 217 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 MATR3P43243 847 aaKnown RBP eCLIP10.23□□□□□ -0.77
USP6-201ENST00000250066 MICALCLQ6ZW33 695 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 KLHL34Q8N239 644 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 EID1Q9Y6B2 187 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 RRP9O43818 475 aaKnown RBP10.23□□□□□ -0.77
USP6-201ENST00000250066 TAF4BQ92750 862 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 NEUROD6Q96NK8 337 aa10.23□□□□□ -0.77
USP6-201ENST00000250066 E9PSI1 815 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 POTEJP0CG39 1038 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 DCAF8L1A6NGE4 600 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 SOGA3Q5TF21 947 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 GSTTP1A0A1W2PQM5 241 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 CCDC148Q8NFR7 591 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 NECTIN2Q92692 538 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 COG6Q9Y2V7 657 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 CBFA2T2O43439 604 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 CEBPZQ03701 1054 aaKnown RBP10.22□□□□□ -0.77
USP6-201ENST00000250066 GBP3Q9H0R5 595 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
USP6-201ENST00000250066 PLIN1O60240 522 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 MYZAPP0CAP1 466 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 HOOK3Q86VS8 718 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 DNAI2Q9GZS0 605 aa10.22□□□□□ -0.77
USP6-201ENST00000250066 STK38Q15208 465 aa10.21□□□□□ -0.77
USP6-201ENST00000250066 CRBNQ96SW2 442 aa10.21□□□□□ -0.77
USP6-201ENST00000250066 IFFO1Q0D2I5 559 aa10.21□□□□□ -0.77
USP6-201ENST00000250066 NFKBIBQ15653 356 aa10.21□□□□□ -0.77
USP6-201ENST00000250066 COMMD10Q9Y6G5 202 aa10.21□□□□□ -0.77
USP6-201ENST00000250066 TIGD1Q96MW7 591 aa10.21□□□□□ -0.77
USP6-201ENST00000250066 FANCIQ9NVI1 1328 aa10.21□□□□□ -0.77
USP6-201ENST00000250066 EPB41L2O43491 1005 aaKnown RBP10.21□□□□□ -0.78
USP6-201ENST00000250066 UBXN4Q92575 508 aa10.21□□□□□ -0.78
USP6-201ENST00000250066 DNAJC2Q99543 621 aaKnown RBP10.21□□□□□ -0.78
USP6-201ENST00000250066 SEPT6Q14141 434 aa10.21□□□□□ -0.78
USP6-201ENST00000250066 ZNF397Q8NF99 534 aaPredicted RBP10.21□□□□□ -0.78
USP6-201ENST00000250066 RNF187Q5TA31 235 aaPredicted RBP10.21□□□□□ -0.78
USP6-201ENST00000250066 ERC1Q8IUD2 1116 aa10.21□□□□□ -0.78
USP6-201ENST00000250066 PDCL2Q8N4E4 241 aa10.21□□□□□ -0.78
USP6-201ENST00000250066 LUZP1Q86V48 1076 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 CNTROBQ8N137 903 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 MCM3P25205 808 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 IMMTQ16891 758 aaKnown RBP10.2□□□□□ -0.78
USP6-201ENST00000250066 CALCOCO1Q9P1Z2 691 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 C6orf163Q5TEZ5 329 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 TBC1D2BQ9UPU7 963 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 FERP16591 822 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 FKBP5Q13451 457 aaPredicted RBP10.2□□□□□ -0.78
USP6-201ENST00000250066 TNMDQ9H2S6 317 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 GOPCQ9HD26 462 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 FIBPO43427 364 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 CLGNO14967 610 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 ATP2B2Q01814 1243 aa10.2□□□□□ -0.78
USP6-201ENST00000250066 GON4LQ3T8J9 2241 aa10.19□□□□□ -0.78
USP6-201ENST00000250066 MCM2P49736 904 aa10.19□□□□□ -0.78
USP6-201ENST00000250066 ZNF526Q8TF50 670 aaPredicted RBP10.19□□□□□ -0.78
USP6-201ENST00000250066 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.19□□□□□ -0.78
USP6-201ENST00000250066 V9GYY5 206 aaPredicted RBP10.19□□□□□ -0.78
USP6-201ENST00000250066 BMP2KQ9NSY1 1161 aaPredicted RBP10.19□□□□□ -0.78
USP6-201ENST00000250066 SERPINA10Q9UK55 444 aa10.19□□□□□ -0.78
USP6-201ENST00000250066 WRNQ14191 1432 aaPredicted RBP eCLIP10.19□□□□□ -0.78
USP6-201ENST00000250066 ME1P48163 572 aa10.19□□□□□ -0.78
USP6-201ENST00000250066 RRP1P56182 461 aaKnown RBP10.19□□□□□ -0.78
USP6-201ENST00000250066 ARHGAP29Q52LW3 1261 aa10.19□□□□□ -0.78
USP6-201ENST00000250066 PRPF40AO75400 957 aaKnown RBP10.19□□□□□ -0.78
USP6-201ENST00000250066 DZIP1LQ8IYY4 767 aaKnown RBP10.19□□□□□ -0.78
USP6-201ENST00000250066 PKD2Q13563 968 aa10.19□□□□□ -0.78
USP6-201ENST00000250066 CCDC160A6NGH7 325 aa10.18□□□□□ -0.78
USP6-201ENST00000250066 PSMD1Q99460 953 aa10.18□□□□□ -0.78
USP6-201ENST00000250066 HOMER2Q9NSB8 354 aa10.18□□□□□ -0.78
USP6-201ENST00000250066 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
USP6-201ENST00000250066 SPECC1Q5M775 1068 aa10.18□□□□□ -0.78
USP6-201ENST00000250066 LNPKQ9C0E8 428 aa10.18□□□□□ -0.78
USP6-201ENST00000250066 TMCO5BA8MYB1 307 aa10.18□□□□□ -0.78
USP6-201ENST00000250066 NAP1L3Q99457 506 aaPredicted RBP10.17□□□□□ -0.78
USP6-201ENST00000250066 API5Q9BZZ5 524 aaKnown RBP10.17□□□□□ -0.78
USP6-201ENST00000250066 EIF4G1Q04637 1599 aaKnown RBP10.17□□□□□ -0.78
USP6-201ENST00000250066 EIF5P55010 431 aaKnown RBP10.17□□□□□ -0.78
USP6-201ENST00000250066 GIGYF2Q6Y7W6 1299 aaKnown RBP10.17□□□□□ -0.78
USP6-201ENST00000250066 KIF15Q9NS87 1388 aa10.17□□□□□ -0.78
USP6-201ENST00000250066 TRIM22Q8IYM9 498 aa10.17□□□□□ -0.78
USP6-201ENST00000250066 WASHC2AQ641Q2 1341 aa10.17□□□□□ -0.78
USP6-201ENST00000250066 COG3Q96JB2 828 aa10.17□□□□□ -0.78
USP6-201ENST00000250066 TNNT1P13805 278 aa10.17□□□□□ -0.78
USP6-201ENST00000250066 FHAD1B1AJZ9 1412 aa10.17□□□□□ -0.78
USP6-201ENST00000250066 SPECC1LQ69YQ0 1117 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms