RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.65■□□□□ 0.74
DDX49-201ENST00000247003 MYH16Q9H6N6 1097 aa19.65■□□□□ 0.74
DDX49-201ENST00000247003 DIAPH1O60610 1272 aaKnown RBP19.64■□□□□ 0.73
DDX49-201ENST00000247003 CPSF1Q10570 1443 aaKnown RBP19.63■□□□□ 0.73
DDX49-201ENST00000247003 MON2Q7Z3U7 1717 aa19.63■□□□□ 0.73
DDX49-201ENST00000247003 EID1Q9Y6B2 187 aa19.63■□□□□ 0.73
DDX49-201ENST00000247003 MYT1Q01538 1121 aa19.62■□□□□ 0.73
DDX49-201ENST00000247003 ADAMTS13Q76LX8 1427 aa19.62■□□□□ 0.73
DDX49-201ENST00000247003 NUDT16Q96DE0 195 aaKnown RBP19.61■□□□□ 0.73
DDX49-201ENST00000247003 PNPLA6Q8IY17 1366 aa19.61■□□□□ 0.73
DDX49-201ENST00000247003 AKAP12Q02952 1782 aa19.61■□□□□ 0.73
DDX49-201ENST00000247003 BCAR3O75815 825 aa19.6■□□□□ 0.73
DDX49-201ENST00000247003 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
DDX49-201ENST00000247003 CCDC61Q9Y6R9 512 aa19.6■□□□□ 0.73
DDX49-201ENST00000247003 NEFMP07197 916 aa19.6■□□□□ 0.73
DDX49-201ENST00000247003 MS4A1P11836 297 aa19.59■□□□□ 0.73
DDX49-201ENST00000247003 SLIT1O75093 1534 aa19.58■□□□□ 0.73
DDX49-201ENST00000247003 PDE3AQ14432 1141 aa19.58■□□□□ 0.73
DDX49-201ENST00000247003 ERICH6Q7L0X2 663 aa19.58■□□□□ 0.73
DDX49-201ENST00000247003 ROBO2Q9HCK4 1378 aa19.57■□□□□ 0.72
DDX49-201ENST00000247003 CEBPAP49715 358 aaPredicted RBP19.57■□□□□ 0.72
DDX49-201ENST00000247003 PLEKHF1Q96S99 279 aa19.57■□□□□ 0.72
DDX49-201ENST00000247003 MAP2P11137 1827 aaKnown RBP19.56■□□□□ 0.72
DDX49-201ENST00000247003 ANP32EQ9BTT0 268 aa19.56■□□□□ 0.72
DDX49-201ENST00000247003 ZNF692Q9BU19 519 aaPredicted RBP19.56■□□□□ 0.72
DDX49-201ENST00000247003 DIP2AQ14689 1571 aa19.56■□□□□ 0.72
DDX49-201ENST00000247003 PPM1GO15355 546 aaPredicted RBP19.55■□□□□ 0.72
DDX49-201ENST00000247003 ANP32AP39687 249 aaKnown RBP19.55■□□□□ 0.72
DDX49-201ENST00000247003 TMPOP42166 694 aaKnown RBP19.55■□□□□ 0.72
DDX49-201ENST00000247003 COG3Q96JB2 828 aa19.55■□□□□ 0.72
DDX49-201ENST00000247003 ARHGAP23Q9P227 1491 aa19.55■□□□□ 0.72
DDX49-201ENST00000247003 LRRC7Q96NW7 1537 aa19.55■□□□□ 0.72
DDX49-201ENST00000247003 KDM2BQ8NHM5 1336 aa19.55■□□□□ 0.72
DDX49-201ENST00000247003 TOPAZ1Q8N9V7 1692 aa19.55■□□□□ 0.72
DDX49-201ENST00000247003 CDK12Q9NYV4 1490 aaPredicted RBP19.55■□□□□ 0.72
DDX49-201ENST00000247003 LTKP29376 864 aa19.55■□□□□ 0.72
DDX49-201ENST00000247003 ADAMTSL3P82987 1691 aa19.54■□□□□ 0.72
DDX49-201ENST00000247003 CT47B1P0C2W7 299 aaPredicted RBP19.54■□□□□ 0.72
DDX49-201ENST00000247003 AATKQ6ZMQ8 1374 aa19.54■□□□□ 0.72
DDX49-201ENST00000247003 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.53■□□□□ 0.72
DDX49-201ENST00000247003 FCHSD2O94868 740 aa19.53■□□□□ 0.72
DDX49-201ENST00000247003 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
DDX49-201ENST00000247003 POLKQ9UBT6 870 aa19.53■□□□□ 0.72
DDX49-201ENST00000247003 NME9Q86XW9 330 aa19.53■□□□□ 0.72
DDX49-201ENST00000247003 FRAT1Q92837 279 aaPredicted RBP19.53■□□□□ 0.72
DDX49-201ENST00000247003 IL16Q14005 1332 aa19.52■□□□□ 0.72
DDX49-201ENST00000247003 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
DDX49-201ENST00000247003 THEMISQ8N1K5 641 aaPredicted RBP19.52■□□□□ 0.72
DDX49-201ENST00000247003 NRKQ7Z2Y5 1582 aa19.51■□□□□ 0.71
DDX49-201ENST00000247003 RIPK4P57078 832 aa19.51■□□□□ 0.71
DDX49-201ENST00000247003 AAMPQ13685 434 aa19.5■□□□□ 0.71
DDX49-201ENST00000247003 PTCH1Q13635 1447 aa19.5■□□□□ 0.71
DDX49-201ENST00000247003 SLC26A8Q96RN1 970 aa19.49■□□□□ 0.71
DDX49-201ENST00000247003 PRR36Q9H6K5 1346 aa19.49■□□□□ 0.71
DDX49-201ENST00000247003 MSH5O43196 834 aa19.48■□□□□ 0.71
DDX49-201ENST00000247003 NCKAP5LQ9HCH0 1330 aa19.48■□□□□ 0.71
DDX49-201ENST00000247003 RIMS1Q86UR5 1692 aaKnown RBP19.48■□□□□ 0.71
DDX49-201ENST00000247003 TRIM35Q9UPQ4 493 aa19.48■□□□□ 0.71
DDX49-201ENST00000247003 TBX22Q9Y458 520 aa19.48■□□□□ 0.71
DDX49-201ENST00000247003 PTPRUQ92729 1446 aa19.47■□□□□ 0.71
DDX49-201ENST00000247003 PDE4AP27815 886 aa19.47■□□□□ 0.71
DDX49-201ENST00000247003 PRKAR2BP31323 418 aa19.47■□□□□ 0.71
DDX49-201ENST00000247003 RSPH6AQ9H0K4 717 aa19.47■□□□□ 0.71
DDX49-201ENST00000247003 EMILIN1Q9Y6C2 1016 aa19.47■□□□□ 0.71
DDX49-201ENST00000247003 CLUAP1Q96AJ1 413 aa19.46■□□□□ 0.71
DDX49-201ENST00000247003 PANK1Q8TE04 598 aa19.46■□□□□ 0.71
DDX49-201ENST00000247003 AMOTL2Q9Y2J4 779 aa19.46■□□□□ 0.71
DDX49-201ENST00000247003 COG6Q9Y2V7 657 aa19.46■□□□□ 0.71
DDX49-201ENST00000247003 CALD1Q05682 793 aaKnown RBP19.45■□□□□ 0.7
DDX49-201ENST00000247003 TSR2Q969E8 191 aaKnown RBP19.45■□□□□ 0.7
DDX49-201ENST00000247003 CEP170BQ9Y4F5 1589 aaPredicted RBP19.44■□□□□ 0.7
DDX49-201ENST00000247003 BCL2L13Q9BXK5 485 aa19.44■□□□□ 0.7
DDX49-201ENST00000247003 BACH2Q9BYV9 841 aa19.44■□□□□ 0.7
DDX49-201ENST00000247003 ACEP12821 1306 aa19.44■□□□□ 0.7
DDX49-201ENST00000247003 USP6P35125 1406 aa19.44■□□□□ 0.7
DDX49-201ENST00000247003 PLEKHG3A1L390 1219 aa19.44■□□□□ 0.7
DDX49-201ENST00000247003 FBLN1P23142 703 aa19.44■□□□□ 0.7
DDX49-201ENST00000247003 ZRANB1Q9UGI0 708 aa19.44■□□□□ 0.7
DDX49-201ENST00000247003 EXOSC9Q06265 439 aaKnown RBP19.43■□□□□ 0.7
DDX49-201ENST00000247003 TTC21BQ7Z4L5 1316 aa19.43■□□□□ 0.7
DDX49-201ENST00000247003 IL13P35225 146 aa19.42■□□□□ 0.7
DDX49-201ENST00000247003 ZKSCAN2Q63HK3 967 aa19.42■□□□□ 0.7
DDX49-201ENST00000247003 FTSJ3Q8IY81 847 aaKnown RBP19.42■□□□□ 0.7
DDX49-201ENST00000247003 SMC4Q9NTJ3 1288 aa19.42■□□□□ 0.7
DDX49-201ENST00000247003 XRN1Q8IZH2 1706 aaKnown RBP19.42■□□□□ 0.7
DDX49-201ENST00000247003 HMOX1P09601 288 aa19.41■□□□□ 0.7
DDX49-201ENST00000247003 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
DDX49-201ENST00000247003 NALCNQ8IZF0 1738 aa19.41■□□□□ 0.7
DDX49-201ENST00000247003 OVOS2A0A0J9YW53 1432 aa19.41■□□□□ 0.7
DDX49-201ENST00000247003 OVOS2Q6IE36 1432 aa19.41■□□□□ 0.7
DDX49-201ENST00000247003 NUTM2FA1L443 756 aa19.41■□□□□ 0.7
DDX49-201ENST00000247003 RRS1Q15050 365 aaKnown RBP19.41■□□□□ 0.7
DDX49-201ENST00000247003 SETD1BQ9UPS6 1966 aaKnown RBP19.41■□□□□ 0.7
DDX49-201ENST00000247003 LMOD3Q0VAK6 560 aa19.4■□□□□ 0.7
DDX49-201ENST00000247003 PMFBP1Q8TBY8 1022 aa19.4■□□□□ 0.7
DDX49-201ENST00000247003 IPO9Q96P70 1041 aaKnown RBP19.39■□□□□ 0.7
DDX49-201ENST00000247003 NOP58Q9Y2X3 529 aaKnown RBP19.39■□□□□ 0.7
DDX49-201ENST00000247003 PIK3R4Q99570 1358 aa19.39■□□□□ 0.69
DDX49-201ENST00000247003 TTC21AQ8NDW8 1320 aa19.38■□□□□ 0.69
DDX49-201ENST00000247003 KIF16BQ96L93 1317 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms