RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 NWD2Q9ULI1 1742 aa23.89■■□□□ 1.41
CLTA-201ENST00000242285 SBNO2Q9Y2G9 1366 aa23.89■■□□□ 1.41
CLTA-201ENST00000242285 GLI3P10071 1580 aa23.88■■□□□ 1.41
CLTA-201ENST00000242285 HAP1P54257 671 aaPredicted RBP23.88■■□□□ 1.41
CLTA-201ENST00000242285 EP400Q96L91 3159 aa23.88■■□□□ 1.41
CLTA-201ENST00000242285 PLEKHG3A1L390 1219 aa23.87■■□□□ 1.41
CLTA-201ENST00000242285 NGDNQ8NEJ9 315 aaKnown RBP23.87■■□□□ 1.41
CLTA-201ENST00000242285 VPS72Q15906 364 aa23.86■■□□□ 1.41
CLTA-201ENST00000242285 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
CLTA-201ENST00000242285 TIMELESSQ9UNS1 1208 aa23.85■■□□□ 1.41
CLTA-201ENST00000242285 EVC2Q86UK5 1308 aa23.84■■□□□ 1.41
CLTA-201ENST00000242285 ONECUT3O60422 494 aaPredicted RBP23.83■■□□□ 1.41
CLTA-201ENST00000242285 SRPK2P78362 688 aaKnown RBP23.83■■□□□ 1.41
CLTA-201ENST00000242285 CARD11Q9BXL7 1154 aa23.83■■□□□ 1.41
CLTA-201ENST00000242285 PLCH1Q4KWH8 1693 aa23.83■■□□□ 1.4
CLTA-201ENST00000242285 BRD4O60885 1362 aaPredicted RBP23.82■■□□□ 1.4
CLTA-201ENST00000242285 AKAP12Q02952 1782 aa23.82■■□□□ 1.4
CLTA-201ENST00000242285 PPIP5K1Q6PFW1 1433 aa23.82■■□□□ 1.4
CLTA-201ENST00000242285 BLMP54132 1417 aaPredicted RBP23.81■■□□□ 1.4
CLTA-201ENST00000242285 ACEP12821 1306 aa23.81■■□□□ 1.4
CLTA-201ENST00000242285 CABLES1Q8TDN4 633 aa23.8■■□□□ 1.4
CLTA-201ENST00000242285 LMOD2Q6P5Q4 547 aa23.79■■□□□ 1.4
CLTA-201ENST00000242285 PHRF1Q9P1Y6 1649 aaKnown RBP23.78■■□□□ 1.4
CLTA-201ENST00000242285 CABP2Q9NPB3 220 aa23.78■■□□□ 1.4
CLTA-201ENST00000242285 ZRANB1Q9UGI0 708 aa23.78■■□□□ 1.4
CLTA-201ENST00000242285 COL14A1Q05707 1796 aaKnown RBP23.76■■□□□ 1.39
CLTA-201ENST00000242285 SEPT12Q8IYM1 358 aa23.76■■□□□ 1.39
CLTA-201ENST00000242285 FAM83GA6ND36 823 aa23.75■■□□□ 1.39
CLTA-201ENST00000242285 NRAPQ86VF7 1730 aa23.73■■□□□ 1.39
CLTA-201ENST00000242285 MON2Q7Z3U7 1717 aa23.73■■□□□ 1.39
CLTA-201ENST00000242285 PAK3O75914 559 aaPredicted RBP23.72■■□□□ 1.39
CLTA-201ENST00000242285 USP6P35125 1406 aa23.72■■□□□ 1.39
CLTA-201ENST00000242285 SLC24A1O60721 1099 aa23.71■■□□□ 1.39
CLTA-201ENST00000242285 CCDC9Q9Y3X0 531 aaKnown RBP23.71■■□□□ 1.39
CLTA-201ENST00000242285 KRT27Q7Z3Y8 459 aa23.7■■□□□ 1.38
CLTA-201ENST00000242285 PUS7Q96PZ0 661 aaKnown RBP23.7■■□□□ 1.38
CLTA-201ENST00000242285 CABP1Q9NZU7 370 aa23.7■■□□□ 1.38
CLTA-201ENST00000242285 BRWD3Q6RI45 1802 aa23.7■■□□□ 1.38
CLTA-201ENST00000242285 NRKQ7Z2Y5 1582 aa23.69■■□□□ 1.38
CLTA-201ENST00000242285 SF3B2Q13435 895 aaKnown RBP23.69■■□□□ 1.38
CLTA-201ENST00000242285 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
CLTA-201ENST00000242285 SRCAPQ6ZRS2 3230 aa23.69■■□□□ 1.38
CLTA-201ENST00000242285 SSH2Q76I76 1423 aa23.68■■□□□ 1.38
CLTA-201ENST00000242285 ZNF692Q9BU19 519 aaPredicted RBP23.67■■□□□ 1.38
CLTA-201ENST00000242285 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
CLTA-201ENST00000242285 PIK3C2AO00443 1686 aa23.67■■□□□ 1.38
CLTA-201ENST00000242285 USP19O94966 1318 aa23.65■■□□□ 1.38
CLTA-201ENST00000242285 PLEKHG5O94827 1062 aa23.65■■□□□ 1.38
CLTA-201ENST00000242285 USP54Q70EL1 1684 aa23.64■■□□□ 1.38
CLTA-201ENST00000242285 ABTB2Q8N961 1025 aa23.64■■□□□ 1.37
CLTA-201ENST00000242285 TESK2Q96S53 571 aa23.64■■□□□ 1.37
CLTA-201ENST00000242285 SPATA31A5Q5VU36 1347 aa23.63■■□□□ 1.37
CLTA-201ENST00000242285 SPATA31A7Q8IWB4 1347 aa23.63■■□□□ 1.37
CLTA-201ENST00000242285 PRDM11Q9NQV5 511 aa23.63■■□□□ 1.37
CLTA-201ENST00000242285 ST20-MTHFSA0A0A6YYL1 179 aa23.62■■□□□ 1.37
CLTA-201ENST00000242285 NLRP13Q86W25 1043 aa23.62■■□□□ 1.37
CLTA-201ENST00000242285 SLIT3O75094 1523 aa23.62■■□□□ 1.37
CLTA-201ENST00000242285 USP47Q96K76 1375 aa23.62■■□□□ 1.37
CLTA-201ENST00000242285 FAM98CQ17RN3 349 aaKnown RBP23.61■■□□□ 1.37
CLTA-201ENST00000242285 CCER1Q8TC90 406 aaPredicted RBP23.61■■□□□ 1.37
CLTA-201ENST00000242285 NINLQ9Y2I6 1382 aa23.61■■□□□ 1.37
CLTA-201ENST00000242285 CPDO75976 1380 aa23.6■■□□□ 1.37
CLTA-201ENST00000242285 LMO7Q8WWI1 1683 aa23.6■■□□□ 1.37
CLTA-201ENST00000242285 THSD7AQ9UPZ6 1657 aa23.6■■□□□ 1.37
CLTA-201ENST00000242285 TTC21AQ8NDW8 1320 aa23.59■■□□□ 1.37
CLTA-201ENST00000242285 CD163L1Q9NR16 1453 aa23.59■■□□□ 1.37
CLTA-201ENST00000242285 KIAA0232Q92628 1395 aa23.58■■□□□ 1.37
CLTA-201ENST00000242285 A0A0G2JS52 829 aa23.58■■□□□ 1.37
CLTA-201ENST00000242285 MYT1Q01538 1121 aa23.58■■□□□ 1.37
CLTA-201ENST00000242285 KTN1Q86UP2 1357 aaKnown RBP23.57■■□□□ 1.36
CLTA-201ENST00000242285 BAG6P46379 1132 aa23.57■■□□□ 1.36
CLTA-201ENST00000242285 DEFB132Q7Z7B7 95 aa23.57■■□□□ 1.36
CLTA-201ENST00000242285 TTC21BQ7Z4L5 1316 aa23.57■■□□□ 1.36
CLTA-201ENST00000242285 NUTM2GQ5VZR2 741 aa23.56■■□□□ 1.36
CLTA-201ENST00000242285 SPATA31A1Q5TZJ5 1347 aa23.56■■□□□ 1.36
CLTA-201ENST00000242285 DISP2A7MBM2 1401 aa23.55■■□□□ 1.36
CLTA-201ENST00000242285 GCP02774 474 aa23.54■■□□□ 1.36
CLTA-201ENST00000242285 RGPD1P0DJD0 1748 aa23.53■■□□□ 1.36
CLTA-201ENST00000242285 COL18A1P39060 1754 aa23.53■■□□□ 1.36
CLTA-201ENST00000242285 NLRP6P59044 892 aa23.53■■□□□ 1.36
CLTA-201ENST00000242285 EDC4Q6P2E9 1401 aaKnown RBP23.51■■□□□ 1.35
CLTA-201ENST00000242285 TMF1P82094 1093 aa23.51■■□□□ 1.35
CLTA-201ENST00000242285 HDGFL2Q7Z4V5 671 aaPredicted RBP23.51■■□□□ 1.35
CLTA-201ENST00000242285 TERF2IPQ9NYB0 399 aa23.51■■□□□ 1.35
CLTA-201ENST00000242285 ZC3H6P61129 1189 aaKnown RBP23.5■■□□□ 1.35
CLTA-201ENST00000242285 BARGINQ6ZT62 677 aa23.5■■□□□ 1.35
CLTA-201ENST00000242285 CAMTA1Q9Y6Y1 1673 aa23.5■■□□□ 1.35
CLTA-201ENST00000242285 USP31Q70CQ4 1352 aa23.5■■□□□ 1.35
CLTA-201ENST00000242285 ABCC6O95255 1503 aa23.49■■□□□ 1.35
CLTA-201ENST00000242285 TMC1Q8TDI8 760 aa23.49■■□□□ 1.35
CLTA-201ENST00000242285 SLC12A5Q9H2X9 1139 aa23.49■■□□□ 1.35
CLTA-201ENST00000242285 RGPD5Q99666 1765 aa23.49■■□□□ 1.35
CLTA-201ENST00000242285 A0A1W2PP64 1363 aa23.49■■□□□ 1.35
CLTA-201ENST00000242285 LRP5O75197 1615 aa23.48■■□□□ 1.35
CLTA-201ENST00000242285 CDCA8Q53HL2 280 aa23.48■■□□□ 1.35
CLTA-201ENST00000242285 NFAT5O94916 1531 aa23.48■■□□□ 1.35
CLTA-201ENST00000242285 CHRNA2Q15822 529 aa23.47■■□□□ 1.35
CLTA-201ENST00000242285 FAM196AQ6ZSG2 479 aa23.47■■□□□ 1.35
CLTA-201ENST00000242285 KCNH5Q8NCM2 988 aa23.47■■□□□ 1.35
CLTA-201ENST00000242285 MYOM1P52179 1685 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms