RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 LRRFIP2Q9Y608 721 aaKnown RBP16.47■□□□□ 0.23
TARDBP-201ENST00000240185 NINLQ9Y2I6 1382 aa16.47■□□□□ 0.23
TARDBP-201ENST00000240185 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
TARDBP-201ENST00000240185 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.23
TARDBP-201ENST00000240185 CALCOCO1Q9P1Z2 691 aa16.46■□□□□ 0.23
TARDBP-201ENST00000240185 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
TARDBP-201ENST00000240185 SYCP1Q15431 976 aa16.46■□□□□ 0.23
TARDBP-201ENST00000240185 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
TARDBP-201ENST00000240185 NEUROD6Q96NK8 337 aa16.46■□□□□ 0.23
TARDBP-201ENST00000240185 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
TARDBP-201ENST00000240185 FILIP1Q7Z7B0 1213 aa16.46■□□□□ 0.22
TARDBP-201ENST00000240185 RUNDC1Q96C34 613 aa16.46■□□□□ 0.22
TARDBP-201ENST00000240185 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
TARDBP-201ENST00000240185 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
TARDBP-201ENST00000240185 DHX57Q6P158 1386 aaKnown RBP16.45■□□□□ 0.22
TARDBP-201ENST00000240185 KIF3BO15066 747 aa16.45■□□□□ 0.22
TARDBP-201ENST00000240185 TXLNAP40222 546 aa16.45■□□□□ 0.22
TARDBP-201ENST00000240185 USP47Q96K76 1375 aa16.45■□□□□ 0.22
TARDBP-201ENST00000240185 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
TARDBP-201ENST00000240185 MCM4P33991 863 aa16.45■□□□□ 0.22
TARDBP-201ENST00000240185 IQCEQ6IPM2 695 aa16.45■□□□□ 0.22
TARDBP-201ENST00000240185 IPO4Q8TEX9 1081 aaKnown RBP16.45■□□□□ 0.22
TARDBP-201ENST00000240185 PDZRN3Q9UPQ7 1066 aa16.45■□□□□ 0.22
TARDBP-201ENST00000240185 KRI1Q8N9T8 703 aaKnown RBP16.44■□□□□ 0.22
TARDBP-201ENST00000240185 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
TARDBP-201ENST00000240185 GPATCH11Q8N954 259 aa16.44■□□□□ 0.22
TARDBP-201ENST00000240185 JMYQ8N9B5 988 aa16.44■□□□□ 0.22
TARDBP-201ENST00000240185 BACH2Q9BYV9 841 aa16.44■□□□□ 0.22
TARDBP-201ENST00000240185 PDCL3Q9H2J4 239 aa16.44■□□□□ 0.22
TARDBP-201ENST00000240185 WDR33Q9C0J8 1336 aaKnown RBP16.43■□□□□ 0.22
TARDBP-201ENST00000240185 GNAI1P63096 354 aa16.43■□□□□ 0.22
TARDBP-201ENST00000240185 CBFA2T2O43439 604 aa16.43■□□□□ 0.22
TARDBP-201ENST00000240185 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
TARDBP-201ENST00000240185 CRACR2AQ9BSW2 395 aa16.43■□□□□ 0.22
TARDBP-201ENST00000240185 TICAM2Q86XR7 235 aa16.43■□□□□ 0.22
TARDBP-201ENST00000240185 TXLNBQ8N3L3 684 aa16.43■□□□□ 0.22
TARDBP-201ENST00000240185 KRT85P78386 507 aa16.42■□□□□ 0.22
TARDBP-201ENST00000240185 DACH1Q9UI36 760 aa16.42■□□□□ 0.22
TARDBP-201ENST00000240185 K7ELQ4 463 aaPredicted RBP16.42■□□□□ 0.22
TARDBP-201ENST00000240185 ME1P48163 572 aa16.42■□□□□ 0.22
TARDBP-201ENST00000240185 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
TARDBP-201ENST00000240185 CDK5RAP3Q96JB5 506 aa16.42■□□□□ 0.22
TARDBP-201ENST00000240185 GBP3Q9H0R5 595 aa16.41■□□□□ 0.22
TARDBP-201ENST00000240185 UBTFL1P0CB47 393 aaPredicted RBP16.41■□□□□ 0.22
TARDBP-201ENST00000240185 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
TARDBP-201ENST00000240185 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
TARDBP-201ENST00000240185 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
TARDBP-201ENST00000240185 SART3Q15020 963 aaKnown RBP16.41■□□□□ 0.22
TARDBP-201ENST00000240185 GOLGA6L10A0A0M3HER8 536 aa16.4■□□□□ 0.22
TARDBP-201ENST00000240185 RSPH4AQ5TD94 716 aa16.4■□□□□ 0.22
TARDBP-201ENST00000240185 RBM25P49756 843 aaKnown RBP16.4■□□□□ 0.22
TARDBP-201ENST00000240185 EFCAB2Q5VUJ9 269 aa16.4■□□□□ 0.22
TARDBP-201ENST00000240185 RBM33Q96EV2 1170 aaKnown RBP16.4■□□□□ 0.22
TARDBP-201ENST00000240185 MTMR7Q9Y216 660 aa16.4■□□□□ 0.22
TARDBP-201ENST00000240185 CEP57L1Q8IYX8 460 aa16.4■□□□□ 0.22
TARDBP-201ENST00000240185 EVC2Q86UK5 1308 aa16.4■□□□□ 0.22
TARDBP-201ENST00000240185 FYB1O15117 783 aa16.39■□□□□ 0.21
TARDBP-201ENST00000240185 ZMYND15Q9H091 742 aa16.39■□□□□ 0.21
TARDBP-201ENST00000240185 TSPYL4Q9UJ04 414 aa16.39■□□□□ 0.21
TARDBP-201ENST00000240185 ARHGAP29Q52LW3 1261 aa16.38■□□□□ 0.21
TARDBP-201ENST00000240185 PAF1Q8N7H5 531 aa16.38■□□□□ 0.21
TARDBP-201ENST00000240185 KIF2AO00139 706 aaPredicted RBP16.38■□□□□ 0.21
TARDBP-201ENST00000240185 STIM1Q13586 685 aa16.38■□□□□ 0.21
TARDBP-201ENST00000240185 KRT18P05783 430 aaKnown RBP16.38■□□□□ 0.21
TARDBP-201ENST00000240185 PTPN14Q15678 1187 aa16.38■□□□□ 0.21
TARDBP-201ENST00000240185 MAP2K1Q02750 393 aaPredicted RBP16.37■□□□□ 0.21
TARDBP-201ENST00000240185 NUP62CLQ9H1M0 184 aa16.37■□□□□ 0.21
TARDBP-201ENST00000240185 CIZ1Q9ULV3 898 aaPredicted RBP16.37■□□□□ 0.21
TARDBP-201ENST00000240185 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
TARDBP-201ENST00000240185 SURF6O75683 361 aaKnown RBP16.37■□□□□ 0.21
TARDBP-201ENST00000240185 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
TARDBP-201ENST00000240185 TANGO6Q9C0B7 1094 aa16.37■□□□□ 0.21
TARDBP-201ENST00000240185 UBE2Q2Q8WVN8 375 aa16.37■□□□□ 0.21
TARDBP-201ENST00000240185 CCDC144AA2RUR9 1427 aa16.36■□□□□ 0.21
TARDBP-201ENST00000240185 POLR3GO15318 223 aaPredicted RBP16.36■□□□□ 0.21
TARDBP-201ENST00000240185 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.217e-26■■■□□ 18.2
TARDBP-201ENST00000240185 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
TARDBP-201ENST00000240185 CUX2O14529 1486 aa16.36■□□□□ 0.21
TARDBP-201ENST00000240185 EPB41L2O43491 1005 aaKnown RBP16.36■□□□□ 0.21
TARDBP-201ENST00000240185 SLC26A8Q96RN1 970 aa16.36■□□□□ 0.21
TARDBP-201ENST00000240185 LARP1BQ659C4 914 aaKnown RBP16.36■□□□□ 0.21
TARDBP-201ENST00000240185 EID1Q9Y6B2 187 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 GBP2P32456 591 aaPredicted RBP16.35■□□□□ 0.21
TARDBP-201ENST00000240185 DDX11Q96FC9 970 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 HIP1O00291 1037 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 NF2P35240 595 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 HNRNPMP52272 730 aaKnown RBP eCLIP16.35■□□□□ 0.217e-7■■□□□ 12.4
TARDBP-201ENST00000240185 STK3Q13188 491 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 KIF18AQ8NI77 898 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 SYCE3A1L190 88 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 SPATA32Q96LK8 384 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 FAM107BQ9H098 131 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 CFAP45Q9UL16 551 aa16.35■□□□□ 0.21
TARDBP-201ENST00000240185 XPCQ01831 940 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-201ENST00000240185 CCDC148Q8NFR7 591 aa16.34■□□□□ 0.21
TARDBP-201ENST00000240185 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
TARDBP-201ENST00000240185 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
TARDBP-201ENST00000240185 GNAI3P08754 354 aa16.34■□□□□ 0.21
TARDBP-201ENST00000240185 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
TARDBP-201ENST00000240185 RNF187Q5TA31 235 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms