RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
SLF2-201ENST00000238961 PIP4K2AP48426 406 aaPredicted RBP12.21□□□□□ -0.45
SLF2-201ENST00000238961 JAKMIP3Q5VZ66 844 aa12.21□□□□□ -0.45
SLF2-201ENST00000238961 SSBP05455 408 aaKnown RBP eCLIP12.21□□□□□ -0.45
SLF2-201ENST00000238961 ZNF76P36508 570 aa12.21□□□□□ -0.45
SLF2-201ENST00000238961 STIM1Q13586 685 aa12.21□□□□□ -0.45
SLF2-201ENST00000238961 CCP110O43303 1012 aa12.21□□□□□ -0.45
SLF2-201ENST00000238961 RIC3Q7Z5B4 369 aa12.21□□□□□ -0.46
SLF2-201ENST00000238961 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.46
SLF2-201ENST00000238961 TRIM5Q9C035 493 aa12.2□□□□□ -0.46
SLF2-201ENST00000238961 FERP16591 822 aa12.2□□□□□ -0.46
SLF2-201ENST00000238961 CETN2P41208 172 aa12.2□□□□□ -0.46
SLF2-201ENST00000238961 RGS22Q8NE09 1264 aa12.2□□□□□ -0.46
SLF2-201ENST00000238961 AIMP1Q12904 312 aaKnown RBP12.2□□□□□ -0.46
SLF2-201ENST00000238961 ZSCAN29Q8IWY8 852 aaPredicted RBP12.2□□□□□ -0.46
SLF2-201ENST00000238961 ROCK2O75116 1388 aaKnown RBP12.2□□□□□ -0.46
SLF2-201ENST00000238961 TIGD1Q96MW7 591 aa12.2□□□□□ -0.46
SLF2-201ENST00000238961 BCL2L13Q9BXK5 485 aa12.2□□□□□ -0.46
SLF2-201ENST00000238961 PPFIBP1Q86W92 1011 aa12.19□□□□□ -0.46
SLF2-201ENST00000238961 ERC2O15083 957 aa12.19□□□□□ -0.46
SLF2-201ENST00000238961 PSME1Q06323 249 aa12.19□□□□□ -0.46
SLF2-201ENST00000238961 CARMIL2Q6F5E8 1435 aa12.19□□□□□ -0.46
SLF2-201ENST00000238961 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
SLF2-201ENST00000238961 USP8P40818 1118 aa12.18□□□□□ -0.46
SLF2-201ENST00000238961 FAM43AQ8N2R8 423 aa12.18□□□□□ -0.46
SLF2-201ENST00000238961 COG3Q96JB2 828 aa12.18□□□□□ -0.46
SLF2-201ENST00000238961 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
SLF2-201ENST00000238961 SERPINC1P01008 464 aa12.18□□□□□ -0.46
SLF2-201ENST00000238961 FAM177A1Q8N128 213 aaPredicted RBP12.18□□□□□ -0.46
SLF2-201ENST00000238961 ARL1P40616 181 aaPredicted RBP12.18□□□□□ -0.46
SLF2-201ENST00000238961 RAB3IL1Q8TBN0 382 aa12.18□□□□□ -0.46
SLF2-201ENST00000238961 LRRCC1Q9C099 1032 aa12.18□□□□□ -0.46
SLF2-201ENST00000238961 ZMYND15Q9H091 742 aa12.18□□□□□ -0.46
SLF2-201ENST00000238961 CCNB3Q8WWL7 1395 aa12.17□□□□□ -0.46
SLF2-201ENST00000238961 PPP4R3AQ6IN85 833 aa12.17□□□□□ -0.46
SLF2-201ENST00000238961 ERLIN1O75477 346 aa12.16□□□□□ -0.46
SLF2-201ENST00000238961 FKBP5Q13451 457 aaPredicted RBP12.16□□□□□ -0.46
SLF2-201ENST00000238961 TMCO5BA8MYB1 307 aa12.16□□□□□ -0.46
SLF2-201ENST00000238961 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
SLF2-201ENST00000238961 GSTTP1A0A1W2PQM5 241 aa12.16□□□□□ -0.46
SLF2-201ENST00000238961 HOOK3Q86VS8 718 aa12.16□□□□□ -0.46
SLF2-201ENST00000238961 TAF4BQ92750 862 aa12.16□□□□□ -0.46
SLF2-201ENST00000238961 PODXL2Q9NZ53 605 aa12.16□□□□□ -0.46
SLF2-201ENST00000238961 CEBPZQ03701 1054 aaKnown RBP12.16□□□□□ -0.46
SLF2-201ENST00000238961 TTLL12Q14166 644 aaPredicted RBP12.16□□□□□ -0.46
SLF2-201ENST00000238961 CTNNBL1Q8WYA6 563 aaPredicted RBP12.16□□□□□ -0.46
SLF2-201ENST00000238961 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
SLF2-201ENST00000238961 NFKBIBQ15653 356 aa12.15□□□□□ -0.46
SLF2-201ENST00000238961 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
SLF2-201ENST00000238961 CCDC39Q9UFE4 941 aa12.15□□□□□ -0.46
SLF2-201ENST00000238961 IQCEQ6IPM2 695 aa12.15□□□□□ -0.47
SLF2-201ENST00000238961 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
SLF2-201ENST00000238961 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
SLF2-201ENST00000238961 UQCRHLA0A096LP55 91 aa12.14□□□□□ -0.47
SLF2-201ENST00000238961 KIF6Q6ZMV9 814 aa12.14□□□□□ -0.47
SLF2-201ENST00000238961 PSMA5P28066 241 aa12.14□□□□□ -0.47
SLF2-201ENST00000238961 SLU7O95391 586 aaKnown RBP12.14□□□□□ -0.47
SLF2-201ENST00000238961 GSE1Q14687 1217 aa12.14□□□□□ -0.47
SLF2-201ENST00000238961 SH3BP5O60239 455 aa12.13□□□□□ -0.47
SLF2-201ENST00000238961 NOP2P46087 812 aaKnown RBP12.13□□□□□ -0.47
SLF2-201ENST00000238961 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
SLF2-201ENST00000238961 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
SLF2-201ENST00000238961 ZNF354CQ86Y25 554 aa12.13□□□□□ -0.47
SLF2-201ENST00000238961 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
SLF2-201ENST00000238961 TSNARE1Q96NA8 513 aa12.13□□□□□ -0.47
SLF2-201ENST00000238961 GNL3LQ9NVN8 582 aaKnown RBP12.13□□□□□ -0.47
SLF2-201ENST00000238961 MACROD2A1Z1Q3 448 aa12.13□□□□□ -0.47
SLF2-201ENST00000238961 RNF214Q8ND24 703 aa12.13□□□□□ -0.47
SLF2-201ENST00000238961 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.13□□□□□ -0.47
SLF2-201ENST00000238961 APBB1IPQ7Z5R6 666 aaPredicted RBP12.13□□□□□ -0.47
SLF2-201ENST00000238961 RAPGEF4Q8WZA2 1011 aa12.13□□□□□ -0.47
SLF2-201ENST00000238961 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
SLF2-201ENST00000238961 E9PSI1 815 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 CTNNA2P26232 953 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 KIAA1328Q86T90 577 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 SPC24Q8NBT2 197 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 CCDC150Q8NCX0 1101 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 STK38Q15208 465 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 INTS3Q68E01 1043 aaKnown RBP12.12□□□□□ -0.47
SLF2-201ENST00000238961 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
SLF2-201ENST00000238961 USP5P45974 858 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 LRSAM1Q6UWE0 723 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 FSD1Q9BTV5 496 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 CNNM1Q9NRU3 951 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 ZKSCAN2Q63HK3 967 aa12.12□□□□□ -0.47
SLF2-201ENST00000238961 DACH1Q9UI36 760 aa12.11□□□□□ -0.47
SLF2-201ENST00000238961 TNIP1Q15025 636 aa12.11□□□□□ -0.47
SLF2-201ENST00000238961 TTC39AQ5SRH9 613 aa12.11□□□□□ -0.47
SLF2-201ENST00000238961 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
SLF2-201ENST00000238961 RBM25P49756 843 aaKnown RBP12.11□□□□□ -0.47
SLF2-201ENST00000238961 NUCB2P80303 420 aa12.11□□□□□ -0.47
SLF2-201ENST00000238961 GTPBP4Q9BZE4 634 aaKnown RBP12.11□□□□□ -0.47
SLF2-201ENST00000238961 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
SLF2-201ENST00000238961 NINLQ9Y2I6 1382 aa12.11□□□□□ -0.47
SLF2-201ENST00000238961 DAAM2Q86T65 1068 aa12.11□□□□□ -0.47
SLF2-201ENST00000238961 NUP133Q8WUM0 1156 aa12.1□□□□□ -0.47
SLF2-201ENST00000238961 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
SLF2-201ENST00000238961 UQCRHP07919 91 aa12.1□□□□□ -0.47
SLF2-201ENST00000238961 HSPA5P11021 654 aaKnown RBP12.1□□□□□ -0.47
SLF2-201ENST00000238961 DZIP1Q86YF9 867 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms