RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 GOLGA2Q08379 1002 aa29.26■■■□□ 2.27
GCA-201ENST00000233612 AATKQ6ZMQ8 1374 aa29.26■■■□□ 2.27
GCA-201ENST00000233612 TRMT2AQ8IZ69 625 aaKnown RBP29.25■■■□□ 2.27
GCA-201ENST00000233612 RCAN3Q9UKA8 241 aa29.24■■■□□ 2.27
GCA-201ENST00000233612 NRKQ7Z2Y5 1582 aa29.23■■■□□ 2.27
GCA-201ENST00000233612 ANKARQ7Z5J8 1434 aa29.23■■■□□ 2.27
GCA-201ENST00000233612 ACEP12821 1306 aa29.23■■■□□ 2.27
GCA-201ENST00000233612 NPHP4O75161 1426 aaPredicted RBP29.22■■■□□ 2.27
GCA-201ENST00000233612 IQSEC2Q5JU85 1478 aa29.21■■■□□ 2.27
GCA-201ENST00000233612 SLFN5Q08AF3 891 aa29.21■■■□□ 2.27
GCA-201ENST00000233612 DUSP27Q5VZP5 1158 aa29.21■■■□□ 2.27
GCA-201ENST00000233612 PELP1Q8IZL8 1130 aaKnown RBP29.21■■■□□ 2.27
GCA-201ENST00000233612 POLKQ9UBT6 870 aa29.21■■■□□ 2.27
GCA-201ENST00000233612 SSH2Q76I76 1423 aa29.2■■■□□ 2.27
GCA-201ENST00000233612 NKTRP30414 1462 aaKnown RBP29.2■■■□□ 2.27
GCA-201ENST00000233612 MAP2P11137 1827 aaKnown RBP29.2■■■□□ 2.27
GCA-201ENST00000233612 IRX6P78412 446 aaPredicted RBP29.2■■■□□ 2.26
GCA-201ENST00000233612 NME9Q86XW9 330 aa29.2■■■□□ 2.26
GCA-201ENST00000233612 PHF23Q9BUL5 403 aaPredicted RBP29.2■■■□□ 2.26
GCA-201ENST00000233612 USP6P35125 1406 aa29.2■■■□□ 2.26
GCA-201ENST00000233612 PPP4R2Q9NY27 417 aa29.19■■■□□ 2.26
GCA-201ENST00000233612 TTC21BQ7Z4L5 1316 aa29.19■■■□□ 2.26
GCA-201ENST00000233612 CCDC27Q2M243 656 aa29.18■■■□□ 2.26
GCA-201ENST00000233612 COG3Q96JB2 828 aa29.18■■■□□ 2.26
GCA-201ENST00000233612 FMN2Q9NZ56 1722 aa29.17■■■□□ 2.26
GCA-201ENST00000233612 DIAPH1O60610 1272 aaKnown RBP29.16■■■□□ 2.26
GCA-201ENST00000233612 U2AF1L5P0DN76 240 aaPredicted RBP29.16■■■□□ 2.26
GCA-201ENST00000233612 U2AF1Q01081 240 aaKnown RBP eCLIP29.16■■■□□ 2.26
GCA-201ENST00000233612 TCP11L2Q8N4U5 519 aa29.15■■■□□ 2.26
GCA-201ENST00000233612 E9PSI1 815 aa29.14■■■□□ 2.26
GCA-201ENST00000233612 RRP1P56182 461 aaKnown RBP29.14■■■□□ 2.26
GCA-201ENST00000233612 WWC1Q8IX03 1113 aa29.14■■■□□ 2.26
GCA-201ENST00000233612 RGPD8O14715 1765 aaPredicted RBP29.13■■■□□ 2.25
GCA-201ENST00000233612 PLEKHF1Q96S99 279 aa29.13■■■□□ 2.25
GCA-201ENST00000233612 TTC21AQ8NDW8 1320 aa29.13■■■□□ 2.25
GCA-201ENST00000233612 PNNQ9H307 717 aaKnown RBP29.12■■■□□ 2.25
GCA-201ENST00000233612 CDK12Q9NYV4 1490 aaPredicted RBP29.12■■■□□ 2.25
GCA-201ENST00000233612 OVOS2A0A0J9YW53 1432 aa29.11■■■□□ 2.25
GCA-201ENST00000233612 OVOS2Q6IE36 1432 aa29.11■■■□□ 2.25
GCA-201ENST00000233612 WDR63Q8IWG1 891 aa29.11■■■□□ 2.25
GCA-201ENST00000233612 ZRANB1Q9UGI0 708 aa29.11■■■□□ 2.25
GCA-201ENST00000233612 NUTM2FA1L443 756 aa29.1■■■□□ 2.25
GCA-201ENST00000233612 NALCNQ8IZF0 1738 aa29.09■■■□□ 2.25
GCA-201ENST00000233612 NWD1Q149M9 1564 aa29.08■■■□□ 2.25
GCA-201ENST00000233612 USP31Q70CQ4 1352 aa29.08■■■□□ 2.25
GCA-201ENST00000233612 FCHSD2O94868 740 aa29.07■■■□□ 2.24
GCA-201ENST00000233612 U2SURPO15042 1029 aaKnown RBP29.06■■■□□ 2.24
GCA-201ENST00000233612 SPINK5Q9NQ38 1064 aaPredicted RBP29.06■■■□□ 2.24
GCA-201ENST00000233612 ADGRL3Q9HAR2 1447 aa29.05■■■□□ 2.24
GCA-201ENST00000233612 FBLN1P23142 703 aa29.05■■■□□ 2.24
GCA-201ENST00000233612 NGDNQ8NEJ9 315 aaKnown RBP29.04■■■□□ 2.24
GCA-201ENST00000233612 EMILIN1Q9Y6C2 1016 aa29.04■■■□□ 2.24
GCA-201ENST00000233612 PMFBP1Q8TBY8 1022 aa29.03■■■□□ 2.24
GCA-201ENST00000233612 IL13P35225 146 aa29.02■■■□□ 2.24
GCA-201ENST00000233612 DMRT2Q9Y5R5 561 aa29.02■■■□□ 2.24
GCA-201ENST00000233612 TMPOP42166 694 aaKnown RBP28.99■■■□□ 2.23
GCA-201ENST00000233612 RRP7AQ9Y3A4 280 aaKnown RBP28.99■■■□□ 2.23
GCA-201ENST00000233612 USP54Q70EL1 1684 aa28.98■■■□□ 2.23
GCA-201ENST00000233612 RSPH6AQ9H0K4 717 aa28.98■■■□□ 2.23
GCA-201ENST00000233612 PPM1GO15355 546 aaPredicted RBP28.97■■■□□ 2.23
GCA-201ENST00000233612 MAPK8IP3Q9UPT6 1336 aa28.97■■■□□ 2.23
GCA-201ENST00000233612 NEUROD2Q15784 382 aa28.96■■■□□ 2.23
GCA-201ENST00000233612 LRRC7Q96NW7 1537 aa28.96■■■□□ 2.23
GCA-201ENST00000233612 RRS1Q15050 365 aaKnown RBP28.95■■■□□ 2.22
GCA-201ENST00000233612 PIK3C2AO00443 1686 aa28.94■■■□□ 2.22
GCA-201ENST00000233612 PHF8Q9UPP1 1060 aa28.93■■■□□ 2.22
GCA-201ENST00000233612 IL16Q14005 1332 aa28.92■■■□□ 2.22
GCA-201ENST00000233612 TRIM35Q9UPQ4 493 aa28.92■■■□□ 2.22
GCA-201ENST00000233612 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.89■■■□□ 2.22
GCA-201ENST00000233612 MYH16Q9H6N6 1097 aa28.89■■■□□ 2.21
GCA-201ENST00000233612 PRKAR2BP31323 418 aa28.88■■■□□ 2.21
GCA-201ENST00000233612 B4GALNT3Q6L9W6 998 aa28.88■■■□□ 2.21
GCA-201ENST00000233612 PEAK1Q9H792 1746 aa28.87■■■□□ 2.21
GCA-201ENST00000233612 NEFMP07197 916 aa28.87■■■□□ 2.21
GCA-201ENST00000233612 NCOA3Q9Y6Q9 1424 aa28.87■■■□□ 2.21
GCA-201ENST00000233612 KIF24Q5T7B8 1368 aa28.87■■■□□ 2.21
GCA-201ENST00000233612 RIPK4P57078 832 aa28.86■■■□□ 2.21
GCA-201ENST00000233612 MARF1Q9Y4F3 1742 aaKnown RBP28.86■■■□□ 2.21
GCA-201ENST00000233612 PROSER2Q86WR7 435 aaPredicted RBP28.84■■■□□ 2.21
GCA-201ENST00000233612 EXOC6Q8TAG9 804 aa28.84■■■□□ 2.21
GCA-201ENST00000233612 RBM33Q96EV2 1170 aaKnown RBP28.84■■■□□ 2.21
GCA-201ENST00000233612 SBNO1A3KN83 1393 aa28.84■■■□□ 2.21
GCA-201ENST00000233612 CT47B1P0C2W7 299 aaPredicted RBP28.83■■■□□ 2.21
GCA-201ENST00000233612 EIF4A2Q14240 407 aaKnown RBP28.83■■■□□ 2.21
GCA-201ENST00000233612 PLIN1O60240 522 aa28.83■■■□□ 2.21
GCA-201ENST00000233612 NLRP6P59044 892 aa28.83■■■□□ 2.21
GCA-201ENST00000233612 NFE2L2Q16236 605 aa28.83■■■□□ 2.21
GCA-201ENST00000233612 RGPD1P0DJD0 1748 aa28.82■■■□□ 2.2
GCA-201ENST00000233612 MAP3K19Q56UN5 1328 aa28.82■■■□□ 2.2
GCA-201ENST00000233612 C19orf44Q9H6X5 657 aa28.82■■■□□ 2.2
GCA-201ENST00000233612 CCDC136Q96JN2 1154 aa28.81■■■□□ 2.2
GCA-201ENST00000233612 FLT4P35916 1363 aa28.81■■■□□ 2.2
GCA-201ENST00000233612 KDM4FA0A1W2PPD8 638 aa28.8■■■□□ 2.2
GCA-201ENST00000233612 HMOX1P09601 288 aa28.8■■■□□ 2.2
GCA-201ENST00000233612 PHACTR3Q96KR7 559 aa28.8■■■□□ 2.2
GCA-201ENST00000233612 C14orf37Q86TY3 774 aa28.8■■■□□ 2.2
GCA-201ENST00000233612 HSP90AB2PQ58FF8 381 aa28.79■■■□□ 2.2
GCA-201ENST00000233612 ESCO1Q5FWF5 840 aa28.79■■■□□ 2.2
GCA-201ENST00000233612 ABTB2Q8N961 1025 aa28.79■■■□□ 2.2
GCA-201ENST00000233612 STRCP1A6NGW2 1772 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms