RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CAVIN1Q6NZI2 390 aaKnown RBP17.52■□□□□ 0.39
PCDHB3-201ENST00000231130 UGGT1Q9NYU2 1555 aa17.51■□□□□ 0.39
PCDHB3-201ENST00000231130 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
PCDHB3-201ENST00000231130 SMC5Q8IY18 1101 aa17.51■□□□□ 0.39
PCDHB3-201ENST00000231130 ISY1Q9ULR0 285 aaKnown RBP17.51■□□□□ 0.39
PCDHB3-201ENST00000231130 DUOX2Q9NRD8 1548 aa17.51■□□□□ 0.39
PCDHB3-201ENST00000231130 ATP10AO60312 1499 aa17.51■□□□□ 0.39
PCDHB3-201ENST00000231130 CHAMP1Q96JM3 812 aa17.51■□□□□ 0.39
PCDHB3-201ENST00000231130 MADDQ8WXG6 1647 aa17.51■□□□□ 0.39
PCDHB3-201ENST00000231130 MAST1Q9Y2H9 1570 aa17.51■□□□□ 0.39
PCDHB3-201ENST00000231130 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
PCDHB3-201ENST00000231130 PTMAP06454 111 aaKnown RBP17.5■□□□□ 0.39
PCDHB3-201ENST00000231130 PDIA4P13667 645 aaKnown RBP17.5■□□□□ 0.39
PCDHB3-201ENST00000231130 UNC13BO14795 1591 aa17.5■□□□□ 0.39
PCDHB3-201ENST00000231130 VIRMAQ69YN4 1812 aaKnown RBP17.5■□□□□ 0.39
PCDHB3-201ENST00000231130 IPO8O15397 1037 aaKnown RBP17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 RAB3GAP1Q15042 981 aa17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 TBC1D9Q6ZT07 1266 aa17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 VGLL3A8MV65 326 aa17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 K7ELQ4 463 aaPredicted RBP17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 NAP1L2Q9ULW6 460 aaPredicted RBP17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 RTEL1-TNFRSF6BF6WH68 1400 aa17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 IQGAP3Q86VI3 1631 aa17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 IGSF3O75054 1194 aa17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 NUCB1Q02818 461 aa17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 MPNDQ8N594 471 aa17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 TRIM35Q9UPQ4 493 aa17.49■□□□□ 0.39
PCDHB3-201ENST00000231130 FOXD4L6Q3SYB3 417 aaPredicted RBP17.48■□□□□ 0.39
PCDHB3-201ENST00000231130 FOXD4L3Q6VB84 417 aaPredicted RBP17.48■□□□□ 0.39
PCDHB3-201ENST00000231130 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.48■□□□□ 0.39
PCDHB3-201ENST00000231130 PREX2Q70Z35 1606 aa17.48■□□□□ 0.39
PCDHB3-201ENST00000231130 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
PCDHB3-201ENST00000231130 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
PCDHB3-201ENST00000231130 KDM5AP29375 1690 aaKnown RBP17.48■□□□□ 0.39
PCDHB3-201ENST00000231130 HMOX1P09601 288 aa17.47■□□□□ 0.39
PCDHB3-201ENST00000231130 SKOR2Q2VWA4 1001 aaPredicted RBP17.47■□□□□ 0.39
PCDHB3-201ENST00000231130 TSC1Q92574 1164 aa17.47■□□□□ 0.39
PCDHB3-201ENST00000231130 RBM25P49756 843 aaKnown RBP17.47■□□□□ 0.39
PCDHB3-201ENST00000231130 PTPRTO14522 1441 aa17.46■□□□□ 0.39
PCDHB3-201ENST00000231130 PKP1Q13835 747 aa17.46■□□□□ 0.39
PCDHB3-201ENST00000231130 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
PCDHB3-201ENST00000231130 STAC3Q96MF2 364 aa17.46■□□□□ 0.39
PCDHB3-201ENST00000231130 CDK11BP21127 795 aaKnown RBP17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 MTERF4Q7Z6M4 381 aaKnown RBP17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 KIF2CQ99661 725 aa17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 RBM27Q9P2N5 1060 aaKnown RBP17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 RNF17Q9BXT8 1623 aaKnown RBP17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 MYOM1P52179 1685 aa17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 NOS1P29475 1434 aa17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 BAG4O95429 457 aaKnown RBP17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 NOL8Q76FK4 1167 aaKnown RBP17.45■□□□□ 0.38
PCDHB3-201ENST00000231130 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.44■□□□□ 0.38
PCDHB3-201ENST00000231130 RNF214Q8ND24 703 aa17.44■□□□□ 0.38
PCDHB3-201ENST00000231130 SNX21Q969T3 373 aa17.44■□□□□ 0.38
PCDHB3-201ENST00000231130 ATAD2Q6PL18 1390 aa17.43■□□□□ 0.38
PCDHB3-201ENST00000231130 FAM177BA6PVY3 158 aa17.43■□□□□ 0.38
PCDHB3-201ENST00000231130 PRPF40AO75400 957 aaKnown RBP17.43■□□□□ 0.38
PCDHB3-201ENST00000231130 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
PCDHB3-201ENST00000231130 JARID2Q92833 1246 aaPredicted RBP17.43■□□□□ 0.38
PCDHB3-201ENST00000231130 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
PCDHB3-201ENST00000231130 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
PCDHB3-201ENST00000231130 C16orf71Q8IYS4 520 aaPredicted RBP17.43■□□□□ 0.38
PCDHB3-201ENST00000231130 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
PCDHB3-201ENST00000231130 GTF2E1P29083 439 aaPredicted RBP17.42■□□□□ 0.38
PCDHB3-201ENST00000231130 CIZ1Q9ULV3 898 aaPredicted RBP17.42■□□□□ 0.38
PCDHB3-201ENST00000231130 CLTCL1P53675 1640 aa17.42■□□□□ 0.38
PCDHB3-201ENST00000231130 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
PCDHB3-201ENST00000231130 DYNC1I1O14576 645 aa17.42■□□□□ 0.38
PCDHB3-201ENST00000231130 DDIT3P35638 169 aa17.42■□□□□ 0.38
PCDHB3-201ENST00000231130 BMP2KLQ5H9B9 411 aa17.42■□□□□ 0.38
PCDHB3-201ENST00000231130 AK9Q5TCS8 1911 aa17.41■□□□□ 0.38
PCDHB3-201ENST00000231130 EVC2Q86UK5 1308 aa17.41■□□□□ 0.38
PCDHB3-201ENST00000231130 PRKAR2BP31323 418 aa17.4■□□□□ 0.38
PCDHB3-201ENST00000231130 DMTNQ08495 405 aa17.4■□□□□ 0.38
PCDHB3-201ENST00000231130 SPDYE4A6NLX3 237 aa17.4■□□□□ 0.38
PCDHB3-201ENST00000231130 DIAPH1O60610 1272 aaKnown RBP17.4■□□□□ 0.38
PCDHB3-201ENST00000231130 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
PCDHB3-201ENST00000231130 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
PCDHB3-201ENST00000231130 ZGPATQ8N5A5 531 aaKnown RBP17.39■□□□□ 0.37
PCDHB3-201ENST00000231130 PPP1R9BQ96SB3 815 aa17.39■□□□□ 0.37
PCDHB3-201ENST00000231130 CEP152O94986 1710 aa17.38■□□□□ 0.37
PCDHB3-201ENST00000231130 PRIM1P49642 420 aaKnown RBP17.38■□□□□ 0.37
PCDHB3-201ENST00000231130 CSPP1Q1MSJ5 1256 aa17.38■□□□□ 0.37
PCDHB3-201ENST00000231130 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
PCDHB3-201ENST00000231130 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
PCDHB3-201ENST00000231130 RBSNQ9H1K0 784 aa17.38■□□□□ 0.37
PCDHB3-201ENST00000231130 PLCH2O75038 1416 aa17.38■□□□□ 0.37
PCDHB3-201ENST00000231130 CGNQ9P2M7 1197 aaKnown RBP17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 PLXNC1O60486 1568 aa17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 SMARCA5O60264 1052 aaPredicted RBP17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 CDC45O75419 566 aa17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 KLHL40Q2TBA0 621 aa17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 ZSCAN23Q3MJ62 389 aa17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 OTUD7AQ8TE49 926 aaPredicted RBP17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 SASS6Q6UVJ0 657 aa17.37■□□□□ 0.37
PCDHB3-201ENST00000231130 ZMYM3Q14202 1370 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms