RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 SPATA31A3Q5VYP0 1347 aa20.74■□□□□ 0.91
RPA3-201ENST00000223129 CARD14Q9BXL6 1004 aa20.73■□□□□ 0.91
RPA3-201ENST00000223129 SBNO1A3KN83 1393 aa20.73■□□□□ 0.91
RPA3-201ENST00000223129 MON2Q7Z3U7 1717 aa20.73■□□□□ 0.91
RPA3-201ENST00000223129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.73■□□□□ 0.91
RPA3-201ENST00000223129 SSH2Q76I76 1423 aa20.73■□□□□ 0.91
RPA3-201ENST00000223129 TTC21BQ7Z4L5 1316 aa20.72■□□□□ 0.91
RPA3-201ENST00000223129 ZNF316A6NFI3 1004 aaPredicted RBP20.71■□□□□ 0.91
RPA3-201ENST00000223129 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
RPA3-201ENST00000223129 NUTM2GQ5VZR2 741 aa20.71■□□□□ 0.91
RPA3-201ENST00000223129 TNS3Q68CZ2 1445 aa20.71■□□□□ 0.91
RPA3-201ENST00000223129 ABTB2Q8N961 1025 aa20.7■□□□□ 0.9
RPA3-201ENST00000223129 NRKQ7Z2Y5 1582 aa20.69■□□□□ 0.9
RPA3-201ENST00000223129 EDC4Q6P2E9 1401 aaKnown RBP20.69■□□□□ 0.9
RPA3-201ENST00000223129 ALS2Q96Q42 1657 aa20.68■□□□□ 0.9
RPA3-201ENST00000223129 BRD4O60885 1362 aaPredicted RBP20.68■□□□□ 0.9
RPA3-201ENST00000223129 PNPLA6Q8IY17 1366 aa20.68■□□□□ 0.9
RPA3-201ENST00000223129 JCADQ9P266 1359 aa20.68■□□□□ 0.9
RPA3-201ENST00000223129 NME9Q86XW9 330 aa20.67■□□□□ 0.9
RPA3-201ENST00000223129 NSD3Q9BZ95 1437 aa20.67■□□□□ 0.9
RPA3-201ENST00000223129 ZRANB1Q9UGI0 708 aa20.66■□□□□ 0.9
RPA3-201ENST00000223129 TTC21AQ8NDW8 1320 aa20.66■□□□□ 0.9
RPA3-201ENST00000223129 CABLES1Q8TDN4 633 aa20.66■□□□□ 0.9
RPA3-201ENST00000223129 ARHGEF10O15013 1369 aa20.65■□□□□ 0.9
RPA3-201ENST00000223129 NLRP6P59044 892 aa20.65■□□□□ 0.9
RPA3-201ENST00000223129 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
RPA3-201ENST00000223129 PIK3C2AO00443 1686 aa20.64■□□□□ 0.9
RPA3-201ENST00000223129 SHPRHQ149N8 1683 aa20.64■□□□□ 0.9
RPA3-201ENST00000223129 NUTM2BA6NNL0 878 aaPredicted RBP20.63■□□□□ 0.89
RPA3-201ENST00000223129 NUTM2EB1AL46 878 aaPredicted RBP20.63■□□□□ 0.89
RPA3-201ENST00000223129 NUTM2AQ8IVF1 878 aaPredicted RBP20.63■□□□□ 0.89
RPA3-201ENST00000223129 FYB1O15117 783 aa20.62■□□□□ 0.89
RPA3-201ENST00000223129 PER1O15534 1290 aaPredicted RBP20.61■□□□□ 0.89
RPA3-201ENST00000223129 NLRP13Q86W25 1043 aa20.61■□□□□ 0.89
RPA3-201ENST00000223129 GGNBP2Q9H3C7 697 aa20.61■□□□□ 0.89
RPA3-201ENST00000223129 KNSTRNQ9Y448 316 aa20.61■□□□□ 0.89
RPA3-201ENST00000223129 COL22A1Q8NFW1 1626 aaPredicted RBP20.61■□□□□ 0.89
RPA3-201ENST00000223129 MED1Q15648 1581 aaPredicted RBP20.59■□□□□ 0.89
RPA3-201ENST00000223129 CGNL1Q0VF96 1302 aa20.59■□□□□ 0.89
RPA3-201ENST00000223129 SPATA31A6Q5VVP1 1343 aa20.58■□□□□ 0.89
RPA3-201ENST00000223129 HAP1P54257 671 aaPredicted RBP20.58■□□□□ 0.88
RPA3-201ENST00000223129 USP31Q70CQ4 1352 aa20.57■□□□□ 0.88
RPA3-201ENST00000223129 MARF1Q9Y4F3 1742 aaKnown RBP20.57■□□□□ 0.88
RPA3-201ENST00000223129 SOX12O15370 315 aa20.57■□□□□ 0.88
RPA3-201ENST00000223129 CNGB1Q14028 1251 aaPredicted RBP20.57■□□□□ 0.88
RPA3-201ENST00000223129 KIF20BQ96Q89 1820 aa20.56■□□□□ 0.88
RPA3-201ENST00000223129 USP19O94966 1318 aa20.56■□□□□ 0.88
RPA3-201ENST00000223129 ADAMTS2O95450 1211 aa20.56■□□□□ 0.88
RPA3-201ENST00000223129 COG3Q96JB2 828 aa20.56■□□□□ 0.88
RPA3-201ENST00000223129 CRYBG1Q9Y4K1 1723 aa20.56■□□□□ 0.88
RPA3-201ENST00000223129 LRP6O75581 1613 aa20.55■□□□□ 0.88
RPA3-201ENST00000223129 GCP02774 474 aa20.55■□□□□ 0.88
RPA3-201ENST00000223129 AMER1Q5JTC6 1135 aaPredicted RBP20.55■□□□□ 0.88
RPA3-201ENST00000223129 ABCA3Q99758 1704 aa20.55■□□□□ 0.88
RPA3-201ENST00000223129 OVOS2A0A0J9YW53 1432 aa20.55■□□□□ 0.88
RPA3-201ENST00000223129 OVOS2Q6IE36 1432 aa20.55■□□□□ 0.88
RPA3-201ENST00000223129 PHRF1Q9P1Y6 1649 aaKnown RBP20.54■□□□□ 0.88
RPA3-201ENST00000223129 FBLN1P23142 703 aa20.53■□□□□ 0.88
RPA3-201ENST00000223129 ZC3H6P61129 1189 aaKnown RBP20.53■□□□□ 0.88
RPA3-201ENST00000223129 CC2D1BQ5T0F9 858 aaKnown RBP20.53■□□□□ 0.88
RPA3-201ENST00000223129 SLIT3O75094 1523 aa20.51■□□□□ 0.87
RPA3-201ENST00000223129 USP54Q70EL1 1684 aa20.51■□□□□ 0.87
RPA3-201ENST00000223129 ZBTB7CA1YPR0 619 aa20.49■□□□□ 0.87
RPA3-201ENST00000223129 MEX3CQ5U5Q3 659 aaKnown RBP20.49■□□□□ 0.87
RPA3-201ENST00000223129 KCNH5Q8NCM2 988 aa20.49■□□□□ 0.87
RPA3-201ENST00000223129 TNNT2P45379 298 aaPredicted RBP20.49■□□□□ 0.87
RPA3-201ENST00000223129 KIAA0232Q92628 1395 aa20.48■□□□□ 0.87
RPA3-201ENST00000223129 MORC1Q86VD1 984 aa20.48■□□□□ 0.87
RPA3-201ENST00000223129 C8orf37Q96NL8 207 aa20.48■□□□□ 0.87
RPA3-201ENST00000223129 NSD2O96028 1365 aa20.48■□□□□ 0.87
RPA3-201ENST00000223129 FAM83GA6ND36 823 aa20.47■□□□□ 0.87
RPA3-201ENST00000223129 CHRNA2Q15822 529 aa20.47■□□□□ 0.87
RPA3-201ENST00000223129 ANKRD26Q9UPS8 1709 aa20.47■□□□□ 0.87
RPA3-201ENST00000223129 NFAT5O94916 1531 aa20.46■□□□□ 0.87
RPA3-201ENST00000223129 PRDM11Q9NQV5 511 aa20.46■□□□□ 0.87
RPA3-201ENST00000223129 NPC1L1Q9UHC9 1359 aa20.45■□□□□ 0.86
RPA3-201ENST00000223129 RRS1Q15050 365 aaKnown RBP20.44■□□□□ 0.86
RPA3-201ENST00000223129 ARHGEF25Q86VW2 580 aa20.44■□□□□ 0.86
RPA3-201ENST00000223129 NGLY1Q96IV0 654 aa20.44■□□□□ 0.86
RPA3-201ENST00000223129 CPDO75976 1380 aa20.43■□□□□ 0.86
RPA3-201ENST00000223129 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
RPA3-201ENST00000223129 LTN1O94822 1766 aa20.41■□□□□ 0.86
RPA3-201ENST00000223129 AXIN2Q9Y2T1 843 aa20.4■□□□□ 0.86
RPA3-201ENST00000223129 EMILIN1Q9Y6C2 1016 aa20.4■□□□□ 0.86
RPA3-201ENST00000223129 BTG4Q9NY30 223 aa20.39■□□□□ 0.86
RPA3-201ENST00000223129 MAP2P11137 1827 aaKnown RBP20.39■□□□□ 0.86
RPA3-201ENST00000223129 AFF2P51816 1311 aa20.39■□□□□ 0.85
RPA3-201ENST00000223129 POLKQ9UBT6 870 aa20.39■□□□□ 0.85
RPA3-201ENST00000223129 COL14A1Q05707 1796 aaKnown RBP20.38■□□□□ 0.85
RPA3-201ENST00000223129 AATKQ6ZMQ8 1374 aa20.38■□□□□ 0.85
RPA3-201ENST00000223129 PPM1GO15355 546 aaPredicted RBP20.38■□□□□ 0.85
RPA3-201ENST00000223129 FNBP4Q8N3X1 1017 aaPredicted RBP20.38■□□□□ 0.85
RPA3-201ENST00000223129 AMPHP49418 695 aa20.37■□□□□ 0.85
RPA3-201ENST00000223129 COL18A1P39060 1754 aa20.37■□□□□ 0.85
RPA3-201ENST00000223129 PLCH1Q4KWH8 1693 aa20.37■□□□□ 0.85
RPA3-201ENST00000223129 USP21Q9UK80 565 aa20.36■□□□□ 0.85
RPA3-201ENST00000223129 SLIT2O94813 1529 aa20.36■□□□□ 0.85
RPA3-201ENST00000223129 CAMTA1Q9Y6Y1 1673 aa20.36■□□□□ 0.85
RPA3-201ENST00000223129 RGPD5Q99666 1765 aa20.36■□□□□ 0.85
RPA3-201ENST00000223129 LMO7Q8WWI1 1683 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms