RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 ARHGEF28Q8N1W1 1705 aaKnown RBP23.03■■□□□ 1.28
LIM2-201ENST00000221973 WASLO00401 505 aaPredicted RBP23.03■■□□□ 1.28
LIM2-201ENST00000221973 PLCH1Q4KWH8 1693 aa23.03■■□□□ 1.28
LIM2-201ENST00000221973 ALS2Q96Q42 1657 aa23.03■■□□□ 1.28
LIM2-201ENST00000221973 PLEKHG5O94827 1062 aa23.01■■□□□ 1.27
LIM2-201ENST00000221973 LMOD2Q6P5Q4 547 aa23.01■■□□□ 1.27
LIM2-201ENST00000221973 NWD2Q9ULI1 1742 aa23.01■■□□□ 1.27
LIM2-201ENST00000221973 FAM83GA6ND36 823 aa23■■□□□ 1.27
LIM2-201ENST00000221973 VPS72Q15906 364 aa22.99■■□□□ 1.27
LIM2-201ENST00000221973 BRWD3Q6RI45 1802 aa22.98■■□□□ 1.27
LIM2-201ENST00000221973 HAP1P54257 671 aaPredicted RBP22.98■■□□□ 1.27
LIM2-201ENST00000221973 ATP7BP35670 1465 aa22.97■■□□□ 1.27
LIM2-201ENST00000221973 ONECUT3O60422 494 aaPredicted RBP22.96■■□□□ 1.27
LIM2-201ENST00000221973 TESK2Q96S53 571 aa22.96■■□□□ 1.27
LIM2-201ENST00000221973 CRYBG1Q9Y4K1 1723 aa22.96■■□□□ 1.27
LIM2-201ENST00000221973 NRAPQ86VF7 1730 aa22.94■■□□□ 1.26
LIM2-201ENST00000221973 QRICH2Q9H0J4 1663 aa22.93■■□□□ 1.26
LIM2-201ENST00000221973 CCDC125Q86Z20 511 aa22.93■■□□□ 1.26
LIM2-201ENST00000221973 SEPT12Q8IYM1 358 aa22.93■■□□□ 1.26
LIM2-201ENST00000221973 NUDT16Q96DE0 195 aaKnown RBP22.93■■□□□ 1.26
LIM2-201ENST00000221973 SBNO2Q9Y2G9 1366 aa22.92■■□□□ 1.26
LIM2-201ENST00000221973 NGDNQ8NEJ9 315 aaKnown RBP22.92■■□□□ 1.26
LIM2-201ENST00000221973 EVC2Q86UK5 1308 aa22.9■■□□□ 1.26
LIM2-201ENST00000221973 TMF1P82094 1093 aa22.9■■□□□ 1.26
LIM2-201ENST00000221973 CDK19Q9BWU1 502 aa22.9■■□□□ 1.26
LIM2-201ENST00000221973 ITSN1Q15811 1721 aa22.9■■□□□ 1.26
LIM2-201ENST00000221973 COL14A1Q05707 1796 aaKnown RBP22.89■■□□□ 1.26
LIM2-201ENST00000221973 TOPAZ1Q8N9V7 1692 aa22.89■■□□□ 1.25
LIM2-201ENST00000221973 SLC24A1O60721 1099 aa22.88■■□□□ 1.25
LIM2-201ENST00000221973 BTG4Q9NY30 223 aa22.88■■□□□ 1.25
LIM2-201ENST00000221973 BLMP54132 1417 aaPredicted RBP22.88■■□□□ 1.25
LIM2-201ENST00000221973 SRPK2P78362 688 aaKnown RBP22.87■■□□□ 1.25
LIM2-201ENST00000221973 CABP2Q9NPB3 220 aa22.87■■□□□ 1.25
LIM2-201ENST00000221973 CCDC9Q9Y3X0 531 aaKnown RBP22.87■■□□□ 1.25
LIM2-201ENST00000221973 POLR3AO14802 1390 aaPredicted RBP22.87■■□□□ 1.25
LIM2-201ENST00000221973 PAK3O75914 559 aaPredicted RBP22.86■■□□□ 1.25
LIM2-201ENST00000221973 C11orf95C9JLR9 678 aaPredicted RBP22.84■■□□□ 1.25
LIM2-201ENST00000221973 ACEP12821 1306 aa22.83■■□□□ 1.25
LIM2-201ENST00000221973 PLEKHG3A1L390 1219 aa22.83■■□□□ 1.25
LIM2-201ENST00000221973 KRT27Q7Z3Y8 459 aa22.83■■□□□ 1.25
LIM2-201ENST00000221973 POLR3GLQ9BT43 218 aa22.83■■□□□ 1.25
LIM2-201ENST00000221973 PHRF1Q9P1Y6 1649 aaKnown RBP22.82■■□□□ 1.24
LIM2-201ENST00000221973 FAM98CQ17RN3 349 aaKnown RBP22.82■■□□□ 1.24
LIM2-201ENST00000221973 DEFB132Q7Z7B7 95 aa22.82■■□□□ 1.24
LIM2-201ENST00000221973 ZRANB1Q9UGI0 708 aa22.82■■□□□ 1.24
LIM2-201ENST00000221973 CCDC61Q9Y6R9 512 aa22.82■■□□□ 1.24
LIM2-201ENST00000221973 SPATA31A5Q5VU36 1347 aa22.82■■□□□ 1.24
LIM2-201ENST00000221973 SPATA31A7Q8IWB4 1347 aa22.82■■□□□ 1.24
LIM2-201ENST00000221973 CDCA8Q53HL2 280 aa22.81■■□□□ 1.24
LIM2-201ENST00000221973 KIAA0232Q92628 1395 aa22.8■■□□□ 1.24
LIM2-201ENST00000221973 NUTM2GQ5VZR2 741 aa22.79■■□□□ 1.24
LIM2-201ENST00000221973 PRDM11Q9NQV5 511 aa22.79■■□□□ 1.24
LIM2-201ENST00000221973 THSD7AQ9UPZ6 1657 aa22.78■■□□□ 1.24
LIM2-201ENST00000221973 CHRNA2Q15822 529 aa22.77■■□□□ 1.24
LIM2-201ENST00000221973 KIF7Q2M1P5 1343 aa22.77■■□□□ 1.24
LIM2-201ENST00000221973 PUS7Q96PZ0 661 aaKnown RBP22.76■■□□□ 1.23
LIM2-201ENST00000221973 ZNF316A6NFI3 1004 aaPredicted RBP22.75■■□□□ 1.23
LIM2-201ENST00000221973 WASHC2AQ641Q2 1341 aa22.75■■□□□ 1.23
LIM2-201ENST00000221973 ZC3H6P61129 1189 aaKnown RBP22.74■■□□□ 1.23
LIM2-201ENST00000221973 TMC1Q8TDI8 760 aa22.74■■□□□ 1.23
LIM2-201ENST00000221973 NRKQ7Z2Y5 1582 aa22.74■■□□□ 1.23
LIM2-201ENST00000221973 SPATA31A1Q5TZJ5 1347 aa22.74■■□□□ 1.23
LIM2-201ENST00000221973 CCDC7Q96M83 1385 aa22.74■■□□□ 1.23
LIM2-201ENST00000221973 PPIP5K1Q6PFW1 1433 aa22.74■■□□□ 1.23
LIM2-201ENST00000221973 A0A0G2JS52 829 aa22.73■■□□□ 1.23
LIM2-201ENST00000221973 MYT1Q01538 1121 aa22.73■■□□□ 1.23
LIM2-201ENST00000221973 USP19O94966 1318 aa22.73■■□□□ 1.23
LIM2-201ENST00000221973 FAM182BQ5T319 152 aa22.72■■□□□ 1.23
LIM2-201ENST00000221973 CABP1Q9NZU7 370 aa22.72■■□□□ 1.23
LIM2-201ENST00000221973 SF3B2Q13435 895 aaKnown RBP22.7■■□□□ 1.22
LIM2-201ENST00000221973 ABTB2Q8N961 1025 aa22.7■■□□□ 1.22
LIM2-201ENST00000221973 SLC12A5Q9H2X9 1139 aa22.7■■□□□ 1.22
LIM2-201ENST00000221973 LMO7Q8WWI1 1683 aa22.7■■□□□ 1.22
LIM2-201ENST00000221973 CAMTA1Q9Y6Y1 1673 aa22.7■■□□□ 1.22
LIM2-201ENST00000221973 CPDO75976 1380 aa22.69■■□□□ 1.22
LIM2-201ENST00000221973 STRN4Q9NRL3 753 aa22.68■■□□□ 1.22
LIM2-201ENST00000221973 SSH2Q76I76 1423 aa22.67■■□□□ 1.22
LIM2-201ENST00000221973 GCP02774 474 aa22.66■■□□□ 1.22
LIM2-201ENST00000221973 USP6P35125 1406 aa22.65■■□□□ 1.22
LIM2-201ENST00000221973 RGPD1P0DJD0 1748 aa22.65■■□□□ 1.22
LIM2-201ENST00000221973 BRD4O60885 1362 aaPredicted RBP22.64■■□□□ 1.22
LIM2-201ENST00000221973 LARP1Q6PKG0 1096 aaKnown RBP22.64■■□□□ 1.21
LIM2-201ENST00000221973 TNS1Q9HBL0 1735 aaKnown RBP22.64■■□□□ 1.21
LIM2-201ENST00000221973 NINLQ9Y2I6 1382 aa22.63■■□□□ 1.21
LIM2-201ENST00000221973 BAG6P46379 1132 aa22.63■■□□□ 1.21
LIM2-201ENST00000221973 NLRP13Q86W25 1043 aa22.63■■□□□ 1.21
LIM2-201ENST00000221973 DISP2A7MBM2 1401 aa22.63■■□□□ 1.21
LIM2-201ENST00000221973 EN1Q05925 392 aaPredicted RBP22.62■■□□□ 1.21
LIM2-201ENST00000221973 BARGINQ6ZT62 677 aa22.62■■□□□ 1.21
LIM2-201ENST00000221973 HDGFL2Q7Z4V5 671 aaPredicted RBP22.61■■□□□ 1.21
LIM2-201ENST00000221973 TERF2IPQ9NYB0 399 aa22.61■■□□□ 1.21
LIM2-201ENST00000221973 USP35Q9P2H5 1018 aa22.61■■□□□ 1.21
LIM2-201ENST00000221973 SLIT3O75094 1523 aa22.61■■□□□ 1.21
LIM2-201ENST00000221973 EVA1CP58658 441 aa22.6■■□□□ 1.21
LIM2-201ENST00000221973 PIK3C2AO00443 1686 aa22.6■■□□□ 1.21
LIM2-201ENST00000221973 PANK3Q9H999 370 aa22.59■■□□□ 1.21
LIM2-201ENST00000221973 COL5A2P05997 1499 aaPredicted RBP22.59■■□□□ 1.21
LIM2-201ENST00000221973 DDX10Q13206 875 aaKnown RBP22.58■■□□□ 1.21
LIM2-201ENST00000221973 A0A1W2PP64 1363 aa22.58■■□□□ 1.21
LIM2-201ENST00000221973 ANKRD36BQ8N2N9 1353 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms