RNA–Protein interactions for RNA: ENST00000216879.8

NSFL1C-201, Transcript of NSFL1 cofactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSFL1C, Length 3,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-201ENST00000216879 SYCP2Q9BX26 1530 aa20.39■□□□□ 0.85
NSFL1C-201ENST00000216879 IPO8O15397 1037 aaKnown RBP20.39■□□□□ 0.85
NSFL1C-201ENST00000216879 CABP2Q9NPB3 220 aa20.39■□□□□ 0.85
NSFL1C-201ENST00000216879 STK26Q9P289 416 aa20.39■□□□□ 0.85
NSFL1C-201ENST00000216879 C17orf53Q8N3J3 647 aaPredicted RBP20.38■□□□□ 0.85
NSFL1C-201ENST00000216879 TMPOP42166 694 aaKnown RBP20.38■□□□□ 0.85
NSFL1C-201ENST00000216879 C16orf71Q8IYS4 520 aaPredicted RBP20.38■□□□□ 0.85
NSFL1C-201ENST00000216879 POLR3AO14802 1390 aaPredicted RBP20.37■□□□□ 0.85
NSFL1C-201ENST00000216879 ABCC10Q5T3U5 1492 aa20.37■□□□□ 0.85
NSFL1C-201ENST00000216879 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
NSFL1C-201ENST00000216879 NSFL1CQ9UNZ2 370 aaKnown RBP20.37■□□□□ 0.85
NSFL1C-201ENST00000216879 CBX1P83916 185 aa20.36■□□□□ 0.85
NSFL1C-201ENST00000216879 KIF16BQ96L93 1317 aa20.36■□□□□ 0.85
NSFL1C-201ENST00000216879 PTMSP20962 102 aa20.36■□□□□ 0.85
NSFL1C-201ENST00000216879 GDPD2Q9HCC8 539 aa20.36■□□□□ 0.85
NSFL1C-201ENST00000216879 IGSF3O75054 1194 aa20.35■□□□□ 0.85
NSFL1C-201ENST00000216879 AK9Q5TCS8 1911 aa20.35■□□□□ 0.85
NSFL1C-201ENST00000216879 BMP2KLQ5H9B9 411 aa20.35■□□□□ 0.85
NSFL1C-201ENST00000216879 VIRMAQ69YN4 1812 aaKnown RBP20.35■□□□□ 0.85
NSFL1C-201ENST00000216879 NUP160Q12769 1436 aa20.34■□□□□ 0.85
NSFL1C-201ENST00000216879 PRDM4Q9UKN5 801 aa20.34■□□□□ 0.85
NSFL1C-201ENST00000216879 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
NSFL1C-201ENST00000216879 CDC45O75419 566 aa20.33■□□□□ 0.85
NSFL1C-201ENST00000216879 LMBRD1Q9NUN5 540 aa20.33■□□□□ 0.85
NSFL1C-201ENST00000216879 OTUD7AQ8TE49 926 aaPredicted RBP20.33■□□□□ 0.84
NSFL1C-201ENST00000216879 HMOX1P09601 288 aa20.33■□□□□ 0.84
NSFL1C-201ENST00000216879 GPT2Q8TD30 523 aa20.33■□□□□ 0.84
NSFL1C-201ENST00000216879 NOL7Q9UMY1 257 aaKnown RBP20.33■□□□□ 0.84
NSFL1C-201ENST00000216879 SMARCA5O60264 1052 aaPredicted RBP20.32■□□□□ 0.84
NSFL1C-201ENST00000216879 DTNBO60941 627 aa20.32■□□□□ 0.84
NSFL1C-201ENST00000216879 SRPK2P78362 688 aaKnown RBP20.32■□□□□ 0.84
NSFL1C-201ENST00000216879 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.32■□□□□ 0.84
NSFL1C-201ENST00000216879 ZKSCAN5Q9Y2L8 839 aa20.32■□□□□ 0.84
NSFL1C-201ENST00000216879 TMEM63CQ9P1W3 806 aa20.31■□□□□ 0.84
NSFL1C-201ENST00000216879 SPAG9O60271 1321 aaKnown RBP20.31■□□□□ 0.84
NSFL1C-201ENST00000216879 TRIM35Q9UPQ4 493 aa20.31■□□□□ 0.84
NSFL1C-201ENST00000216879 EIF2AK4Q9P2K8 1649 aaKnown RBP20.31■□□□□ 0.84
NSFL1C-201ENST00000216879 NPC1L1Q9UHC9 1359 aa20.3■□□□□ 0.84
NSFL1C-201ENST00000216879 NUCB2P80303 420 aa20.3■□□□□ 0.84
NSFL1C-201ENST00000216879 SPDYE4A6NLX3 237 aa20.29■□□□□ 0.84
NSFL1C-201ENST00000216879 TSPYL6Q8N831 410 aa20.29■□□□□ 0.84
NSFL1C-201ENST00000216879 NCOA3Q9Y6Q9 1424 aa20.28■□□□□ 0.84
NSFL1C-201ENST00000216879 SYNMO15061 1565 aa20.28■□□□□ 0.84
NSFL1C-201ENST00000216879 ERVK-7P63135 1459 aa20.28■□□□□ 0.84
NSFL1C-201ENST00000216879 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
NSFL1C-201ENST00000216879 GSPT1P15170 499 aaKnown RBP20.27■□□□□ 0.84
NSFL1C-201ENST00000216879 MAP7D2Q96T17 732 aa20.27■□□□□ 0.84
NSFL1C-201ENST00000216879 SYNJ2O15056 1496 aa20.26■□□□□ 0.83
NSFL1C-201ENST00000216879 ZNF445P59923 1031 aa20.26■□□□□ 0.83
NSFL1C-201ENST00000216879 TSHZ3Q63HK5 1081 aa20.26■□□□□ 0.83
NSFL1C-201ENST00000216879 CCDC39Q9UFE4 941 aa20.26■□□□□ 0.83
NSFL1C-201ENST00000216879 MYO5CQ9NQX4 1742 aa20.26■□□□□ 0.83
NSFL1C-201ENST00000216879 RABEP1Q15276 862 aa20.26■□□□□ 0.83
NSFL1C-201ENST00000216879 TTC12Q9H892 705 aaPredicted RBP20.26■□□□□ 0.83
NSFL1C-201ENST00000216879 SAMD9LQ8IVG5 1584 aa20.26■□□□□ 0.83
NSFL1C-201ENST00000216879 SASS6Q6UVJ0 657 aa20.25■□□□□ 0.83
NSFL1C-201ENST00000216879 ST18O60284 1047 aa20.25■□□□□ 0.83
NSFL1C-201ENST00000216879 NEK4P51957 841 aa20.24■□□□□ 0.83
NSFL1C-201ENST00000216879 CSPP1Q1MSJ5 1256 aa20.24■□□□□ 0.83
NSFL1C-201ENST00000216879 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
NSFL1C-201ENST00000216879 EFCAB2Q5VUJ9 269 aa20.24■□□□□ 0.83
NSFL1C-201ENST00000216879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.24■□□□□ 0.83
NSFL1C-201ENST00000216879 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.24■□□□□ 0.83
NSFL1C-201ENST00000216879 SIRT2Q8IXJ6 389 aa20.24■□□□□ 0.83
NSFL1C-201ENST00000216879 ZMYM3Q14202 1370 aa20.23■□□□□ 0.83
NSFL1C-201ENST00000216879 KIAA2012Q0VF49 1180 aa20.23■□□□□ 0.83
NSFL1C-201ENST00000216879 USP25Q9UHP3 1055 aa20.23■□□□□ 0.83
NSFL1C-201ENST00000216879 PRKAR2BP31323 418 aa20.23■□□□□ 0.83
NSFL1C-201ENST00000216879 DYNC1I1O14576 645 aa20.22■□□□□ 0.83
NSFL1C-201ENST00000216879 ZNF500O60304 480 aaPredicted RBP20.22■□□□□ 0.83
NSFL1C-201ENST00000216879 SCAPERQ9BY12 1400 aa20.22■□□□□ 0.83
NSFL1C-201ENST00000216879 ZBTB7BO15156 539 aaPredicted RBP20.21■□□□□ 0.83
NSFL1C-201ENST00000216879 GCC1Q96CN9 775 aa20.21■□□□□ 0.83
NSFL1C-201ENST00000216879 LRSAM1Q6UWE0 723 aa20.21■□□□□ 0.83
NSFL1C-201ENST00000216879 PPIP5K1Q6PFW1 1433 aa20.21■□□□□ 0.83
NSFL1C-201ENST00000216879 LARP6Q9BRS8 491 aaKnown RBP20.2■□□□□ 0.82
NSFL1C-201ENST00000216879 MRC2Q9UBG0 1479 aa20.2■□□□□ 0.82
NSFL1C-201ENST00000216879 DCTN1Q14203 1278 aa20.19■□□□□ 0.82
NSFL1C-201ENST00000216879 GGT6Q6P531 493 aa20.19■□□□□ 0.82
NSFL1C-201ENST00000216879 ZDHHC9Q9Y397 364 aa20.19■□□□□ 0.82
NSFL1C-201ENST00000216879 DIAPH1O60610 1272 aaKnown RBP20.19■□□□□ 0.82
NSFL1C-201ENST00000216879 PPP4R3BQ5MIZ7 849 aa20.19■□□□□ 0.82
NSFL1C-201ENST00000216879 TSPY26PQ9H489 355 aa20.19■□□□□ 0.82
NSFL1C-201ENST00000216879 MINK1Q8N4C8 1332 aaPredicted RBP20.19■□□□□ 0.82
NSFL1C-201ENST00000216879 CASC1Q6TDU7 716 aa20.19■□□□□ 0.82
NSFL1C-201ENST00000216879 PLEKHM2Q8IWE5 1019 aa20.19■□□□□ 0.82
NSFL1C-201ENST00000216879 UGGT1Q9NYU2 1555 aa20.18■□□□□ 0.82
NSFL1C-201ENST00000216879 PTPRTO14522 1441 aa20.18■□□□□ 0.82
NSFL1C-201ENST00000216879 UPF3BQ9BZI7 483 aaKnown RBP20.18■□□□□ 0.82
NSFL1C-201ENST00000216879 INTS3Q68E01 1043 aaKnown RBP20.18■□□□□ 0.82
NSFL1C-201ENST00000216879 SPC24Q8NBT2 197 aa20.17■□□□□ 0.82
NSFL1C-201ENST00000216879 USP26Q9BXU7 913 aa20.17■□□□□ 0.82
NSFL1C-201ENST00000216879 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
NSFL1C-201ENST00000216879 SDSP20132 328 aa20.17■□□□□ 0.82
NSFL1C-201ENST00000216879 MAPK8IP2Q13387 824 aaPredicted RBP20.17■□□□□ 0.82
NSFL1C-201ENST00000216879 PDLIM2Q96JY6 352 aa20.17■□□□□ 0.82
NSFL1C-201ENST00000216879 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
NSFL1C-201ENST00000216879 CHMP3Q9Y3E7 222 aa20.16■□□□□ 0.82
NSFL1C-201ENST00000216879 GADD45BO75293 160 aaPredicted RBP20.16■□□□□ 0.82
NSFL1C-201ENST00000216879 CT47B1P0C2W7 299 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms