RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 MON2Q7Z3U7 1717 aa22.57■■□□□ 1.2
POLR2E-201ENST00000215587 RALBP1Q15311 655 aa22.57■■□□□ 1.2
POLR2E-201ENST00000215587 NSD2O96028 1365 aa22.56■■□□□ 1.2
POLR2E-201ENST00000215587 USP6P35125 1406 aa22.56■■□□□ 1.2
POLR2E-201ENST00000215587 KIF1AQ12756 1690 aa22.55■■□□□ 1.2
POLR2E-201ENST00000215587 PARD3Q8TEW0 1356 aa22.54■■□□□ 1.2
POLR2E-201ENST00000215587 ORAI2Q96SN7 254 aa22.53■■□□□ 1.2
POLR2E-201ENST00000215587 ROBO1Q9Y6N7 1651 aa22.52■■□□□ 1.2
POLR2E-201ENST00000215587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.52■■□□□ 1.2
POLR2E-201ENST00000215587 BRD4O60885 1362 aaPredicted RBP22.51■■□□□ 1.19
POLR2E-201ENST00000215587 NRKQ7Z2Y5 1582 aa22.51■■□□□ 1.19
POLR2E-201ENST00000215587 SLAIN2Q9P270 581 aa22.5■■□□□ 1.19
POLR2E-201ENST00000215587 TTC21BQ7Z4L5 1316 aa22.5■■□□□ 1.19
POLR2E-201ENST00000215587 KIF20BQ96Q89 1820 aa22.5■■□□□ 1.19
POLR2E-201ENST00000215587 MORC1Q86VD1 984 aa22.49■■□□□ 1.19
POLR2E-201ENST00000215587 TTC21AQ8NDW8 1320 aa22.49■■□□□ 1.19
POLR2E-201ENST00000215587 MYBBP1AQ9BQG0 1328 aaKnown RBP22.49■■□□□ 1.19
POLR2E-201ENST00000215587 CCER2I3L3R5 266 aa22.48■■□□□ 1.19
POLR2E-201ENST00000215587 PSME1Q06323 249 aa22.48■■□□□ 1.19
POLR2E-201ENST00000215587 SSH2Q76I76 1423 aa22.48■■□□□ 1.19
POLR2E-201ENST00000215587 FYB1O15117 783 aa22.47■■□□□ 1.19
POLR2E-201ENST00000215587 GGNBP2Q9H3C7 697 aa22.47■■□□□ 1.19
POLR2E-201ENST00000215587 ANKRD26Q9UPS8 1709 aa22.45■■□□□ 1.19
POLR2E-201ENST00000215587 FOXO3O43524 673 aa22.45■■□□□ 1.18
POLR2E-201ENST00000215587 BRINP3Q76B58 766 aa22.44■■□□□ 1.18
POLR2E-201ENST00000215587 NPHP3Q7Z494 1330 aa22.44■■□□□ 1.18
POLR2E-201ENST00000215587 NME9Q86XW9 330 aa22.44■■□□□ 1.18
POLR2E-201ENST00000215587 UPF1Q92900 1129 aaKnown RBP eCLIP22.44■■□□□ 1.182e-9■■■■■ 30.9
POLR2E-201ENST00000215587 JCADQ9P266 1359 aa22.43■■□□□ 1.18
POLR2E-201ENST00000215587 PAK3O75914 559 aaPredicted RBP22.42■■□□□ 1.18
POLR2E-201ENST00000215587 NLRP13Q86W25 1043 aa22.42■■□□□ 1.18
POLR2E-201ENST00000215587 COG3Q96JB2 828 aa22.42■■□□□ 1.18
POLR2E-201ENST00000215587 KRT28Q7Z3Y7 464 aa22.41■■□□□ 1.18
POLR2E-201ENST00000215587 PPP2R1AP30153 589 aa22.4■■□□□ 1.18
POLR2E-201ENST00000215587 PHLPP1O60346 1717 aa22.4■■□□□ 1.18
POLR2E-201ENST00000215587 XPCQ01831 940 aaPredicted RBP22.39■■□□□ 1.17
POLR2E-201ENST00000215587 TNNT2P45379 298 aaPredicted RBP22.38■■□□□ 1.17
POLR2E-201ENST00000215587 MRS2Q9HD23 443 aa22.38■■□□□ 1.17
POLR2E-201ENST00000215587 OVOS2A0A0J9YW53 1432 aa22.38■■□□□ 1.17
POLR2E-201ENST00000215587 OVOS2Q6IE36 1432 aa22.38■■□□□ 1.17
POLR2E-201ENST00000215587 USP31Q70CQ4 1352 aa22.38■■□□□ 1.17
POLR2E-201ENST00000215587 PIK3C2AO00443 1686 aa22.37■■□□□ 1.17
POLR2E-201ENST00000215587 ZRANB1Q9UGI0 708 aa22.37■■□□□ 1.17
POLR2E-201ENST00000215587 TRPM3Q9HCF6 1732 aaPredicted RBP22.37■■□□□ 1.17
POLR2E-201ENST00000215587 ABTB2Q8N961 1025 aa22.36■■□□□ 1.17
POLR2E-201ENST00000215587 SBNO1A3KN83 1393 aa22.36■■□□□ 1.17
POLR2E-201ENST00000215587 PXDNQ92626 1479 aa22.35■■□□□ 1.17
POLR2E-201ENST00000215587 SRCAPQ6ZRS2 3230 aa22.35■■□□□ 1.17
POLR2E-201ENST00000215587 NLRP6P59044 892 aa22.35■■□□□ 1.17
POLR2E-201ENST00000215587 ZNF772Q68DY9 489 aaPredicted RBP22.34■■□□□ 1.17
POLR2E-201ENST00000215587 DDX17Q92841 729 aaKnown RBP22.34■■□□□ 1.17
POLR2E-201ENST00000215587 USP54Q70EL1 1684 aa22.33■■□□□ 1.17
POLR2E-201ENST00000215587 LMOD2Q6P5Q4 547 aa22.32■■□□□ 1.16
POLR2E-201ENST00000215587 SPATA31A6Q5VVP1 1343 aa22.31■■□□□ 1.16
POLR2E-201ENST00000215587 TNS3Q68CZ2 1445 aa22.31■■□□□ 1.16
POLR2E-201ENST00000215587 COL16A1Q07092 1604 aaPredicted RBP22.31■■□□□ 1.16
POLR2E-201ENST00000215587 NHSL1Q5SYE7 1610 aa22.31■■□□□ 1.16
POLR2E-201ENST00000215587 AATKQ6ZMQ8 1374 aa22.31■■□□□ 1.16
POLR2E-201ENST00000215587 CCDC184Q52MB2 194 aa22.31■■□□□ 1.16
POLR2E-201ENST00000215587 NUTM2GQ5VZR2 741 aa22.31■■□□□ 1.16
POLR2E-201ENST00000215587 LRP6O75581 1613 aa22.31■■□□□ 1.16
POLR2E-201ENST00000215587 SOS2Q07890 1332 aaPredicted RBP22.3■■□□□ 1.16
POLR2E-201ENST00000215587 ARHGEF10O15013 1369 aa22.29■■□□□ 1.16
POLR2E-201ENST00000215587 ALS2Q96Q42 1657 aa22.29■■□□□ 1.16
POLR2E-201ENST00000215587 SPATA31A3Q5VYP0 1347 aa22.29■■□□□ 1.16
POLR2E-201ENST00000215587 MEX3CQ5U5Q3 659 aaKnown RBP22.28■■□□□ 1.16
POLR2E-201ENST00000215587 CFAP53Q96M91 514 aa22.28■■□□□ 1.16
POLR2E-201ENST00000215587 AHDC1Q5TGY3 1603 aaPredicted RBP22.28■■□□□ 1.16
POLR2E-201ENST00000215587 MTHFSP49914 203 aa22.27■■□□□ 1.16
POLR2E-201ENST00000215587 CDK12Q9NYV4 1490 aaPredicted RBP22.26■■□□□ 1.15
POLR2E-201ENST00000215587 MARF1Q9Y4F3 1742 aaKnown RBP22.25■■□□□ 1.15
POLR2E-201ENST00000215587 SMG6Q86US8 1419 aaKnown RBP22.24■■□□□ 1.15
POLR2E-201ENST00000215587 SOX12O15370 315 aa22.24■■□□□ 1.15
POLR2E-201ENST00000215587 RXRBP28702 533 aa22.24■■□□□ 1.15
POLR2E-201ENST00000215587 KCNH5Q8NCM2 988 aa22.24■■□□□ 1.15
POLR2E-201ENST00000215587 POLKQ9UBT6 870 aa22.24■■□□□ 1.15
POLR2E-201ENST00000215587 USP19O94966 1318 aa22.24■■□□□ 1.15
POLR2E-201ENST00000215587 SLIT3O75094 1523 aa22.23■■□□□ 1.15
POLR2E-201ENST00000215587 SHPRHQ149N8 1683 aa22.22■■□□□ 1.15
POLR2E-201ENST00000215587 PPM1GO15355 546 aaPredicted RBP22.21■■□□□ 1.15
POLR2E-201ENST00000215587 FBLN1P23142 703 aa22.21■■□□□ 1.15
POLR2E-201ENST00000215587 RRS1Q15050 365 aaKnown RBP22.21■■□□□ 1.15
POLR2E-201ENST00000215587 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
POLR2E-201ENST00000215587 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
POLR2E-201ENST00000215587 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.14
POLR2E-201ENST00000215587 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
POLR2E-201ENST00000215587 LRRC59Q96AG4 307 aaKnown RBP22.19■■□□□ 1.14
POLR2E-201ENST00000215587 NFAT5O94916 1531 aa22.19■■□□□ 1.14
POLR2E-201ENST00000215587 MAP2P11137 1827 aaKnown RBP22.18■■□□□ 1.14
POLR2E-201ENST00000215587 MAP3K19Q56UN5 1328 aa22.18■■□□□ 1.14
POLR2E-201ENST00000215587 PLEKHG5O94827 1062 aa22.18■■□□□ 1.14
POLR2E-201ENST00000215587 GCP02774 474 aa22.18■■□□□ 1.14
POLR2E-201ENST00000215587 INSRP06213 1382 aa22.17■■□□□ 1.14
POLR2E-201ENST00000215587 PNPLA6Q8IY17 1366 aa22.17■■□□□ 1.14
POLR2E-201ENST00000215587 KIF24Q5T7B8 1368 aa22.16■■□□□ 1.14
POLR2E-201ENST00000215587 AMPHP49418 695 aa22.16■■□□□ 1.14
POLR2E-201ENST00000215587 PHRF1Q9P1Y6 1649 aaKnown RBP22.16■■□□□ 1.14
POLR2E-201ENST00000215587 COL3A1P02461 1466 aaPredicted RBP22.15■■□□□ 1.14
POLR2E-201ENST00000215587 RTL1A6NKG5 1358 aa22.15■■□□□ 1.14
POLR2E-201ENST00000215587 FLT4P35916 1363 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms