RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 TNKS1BP1Q9C0C2 1729 aaKnown RBP40.1■■■■■ 4.01
PDCD2-201ENST00000167218 RALGAPBQ86X10 1494 aa40.07■■■■■ 4.01
PDCD2-201ENST00000167218 PAK3O75914 559 aaPredicted RBP40.07■■■■■ 4.01
PDCD2-201ENST00000167218 CRYBG1Q9Y4K1 1723 aa40.07■■■■■ 4
PDCD2-201ENST00000167218 PPIP5K1Q6PFW1 1433 aa40.06■■■■■ 4
PDCD2-201ENST00000167218 UNC5CLQ8IV45 518 aa40.04■■■■■ 4
PDCD2-201ENST00000167218 EVC2Q86UK5 1308 aa40.03■■■■■ 4
PDCD2-201ENST00000167218 CARD11Q9BXL7 1154 aa40.02■■■■■ 4
PDCD2-201ENST00000167218 FAM83GA6ND36 823 aa40.01■■■■■ 4
PDCD2-201ENST00000167218 PLCH1Q4KWH8 1693 aa40.01■■■■■ 4
PDCD2-201ENST00000167218 GJD4Q96KN9 370 aaPredicted RBP39.99■■■■□ 3.99
PDCD2-201ENST00000167218 NWD2Q9ULI1 1742 aa39.99■■■■□ 3.99
PDCD2-201ENST00000167218 CABP1Q9NZU7 370 aa39.97■■■■□ 3.99
PDCD2-201ENST00000167218 SBNO2Q9Y2G9 1366 aa39.95■■■■□ 3.99
PDCD2-201ENST00000167218 UPF1Q92900 1129 aaKnown RBP eCLIP39.94■■■■□ 3.98
PDCD2-201ENST00000167218 GLI3P10071 1580 aa39.93■■■■□ 3.98
PDCD2-201ENST00000167218 PHRF1Q9P1Y6 1649 aaKnown RBP39.91■■■■□ 3.98
PDCD2-201ENST00000167218 NUTM2GQ5VZR2 741 aa39.9■■■■□ 3.98
PDCD2-201ENST00000167218 PCGF6Q9BYE7 350 aa39.9■■■■□ 3.98
PDCD2-201ENST00000167218 COL14A1Q05707 1796 aaKnown RBP39.89■■■■□ 3.98
PDCD2-201ENST00000167218 VPS72Q15906 364 aa39.88■■■■□ 3.97
PDCD2-201ENST00000167218 NRAPQ86VF7 1730 aa39.88■■■■□ 3.97
PDCD2-201ENST00000167218 BRD4O60885 1362 aaPredicted RBP39.87■■■■□ 3.97
PDCD2-201ENST00000167218 ABTB2Q8N961 1025 aa39.87■■■■□ 3.97
PDCD2-201ENST00000167218 USP6P35125 1406 aa39.87■■■■□ 3.97
PDCD2-201ENST00000167218 SSH2Q76I76 1423 aa39.84■■■■□ 3.97
PDCD2-201ENST00000167218 BTG4Q9NY30 223 aa39.84■■■■□ 3.97
PDCD2-201ENST00000167218 USP19O94966 1318 aa39.82■■■■□ 3.96
PDCD2-201ENST00000167218 ATAD2Q6PL18 1390 aa39.82■■■■□ 3.96
PDCD2-201ENST00000167218 KIAA0232Q92628 1395 aa39.81■■■■□ 3.96
PDCD2-201ENST00000167218 CLSPNQ9HAW4 1339 aa39.8■■■■□ 3.96
PDCD2-201ENST00000167218 PRDM11Q9NQV5 511 aa39.79■■■■□ 3.96
PDCD2-201ENST00000167218 AKAP12Q02952 1782 aa39.79■■■■□ 3.96
PDCD2-201ENST00000167218 NRKQ7Z2Y5 1582 aa39.78■■■■□ 3.96
PDCD2-201ENST00000167218 ZC3H6P61129 1189 aaKnown RBP39.76■■■■□ 3.96
PDCD2-201ENST00000167218 NLRP13Q86W25 1043 aa39.76■■■■□ 3.96
PDCD2-201ENST00000167218 CPSF1Q10570 1443 aaKnown RBP39.75■■■■□ 3.95
PDCD2-201ENST00000167218 ONECUT3O60422 494 aaPredicted RBP39.75■■■■□ 3.95
PDCD2-201ENST00000167218 ZNF692Q9BU19 519 aaPredicted RBP39.75■■■■□ 3.95
PDCD2-201ENST00000167218 EP400Q96L91 3159 aa39.75■■■■□ 3.95
PDCD2-201ENST00000167218 CHRNA2Q15822 529 aa39.73■■■■□ 3.95
PDCD2-201ENST00000167218 CCDC9Q9Y3X0 531 aaKnown RBP39.73■■■■□ 3.95
PDCD2-201ENST00000167218 TESK2Q96S53 571 aa39.72■■■■□ 3.95
PDCD2-201ENST00000167218 TIMELESSQ9UNS1 1208 aa39.72■■■■□ 3.95
PDCD2-201ENST00000167218 PIK3C2AO00443 1686 aa39.71■■■■□ 3.95
PDCD2-201ENST00000167218 BRWD3Q6RI45 1802 aa39.71■■■■□ 3.95
PDCD2-201ENST00000167218 ST20-MTHFSA0A0A6YYL1 179 aa39.7■■■■□ 3.95
PDCD2-201ENST00000167218 GCP02774 474 aa39.7■■■■□ 3.95
PDCD2-201ENST00000167218 CPDO75976 1380 aa39.7■■■■□ 3.95
PDCD2-201ENST00000167218 TTC21BQ7Z4L5 1316 aa39.68■■■■□ 3.94
PDCD2-201ENST00000167218 NLRP6P59044 892 aa39.67■■■■□ 3.94
PDCD2-201ENST00000167218 SEPT12Q8IYM1 358 aa39.67■■■■□ 3.94
PDCD2-201ENST00000167218 PUS7Q96PZ0 661 aaKnown RBP39.66■■■■□ 3.94
PDCD2-201ENST00000167218 CD163L1Q9NR16 1453 aa39.66■■■■□ 3.94
PDCD2-201ENST00000167218 SPATA31A5Q5VU36 1347 aa39.65■■■■□ 3.94
PDCD2-201ENST00000167218 SPATA31A7Q8IWB4 1347 aa39.65■■■■□ 3.94
PDCD2-201ENST00000167218 SLIT3O75094 1523 aa39.65■■■■□ 3.94
PDCD2-201ENST00000167218 MON2Q7Z3U7 1717 aa39.65■■■■□ 3.94
PDCD2-201ENST00000167218 KTN1Q86UP2 1357 aaKnown RBP39.63■■■■□ 3.93
PDCD2-201ENST00000167218 LMO7Q8WWI1 1683 aa39.63■■■■□ 3.93
PDCD2-201ENST00000167218 CAMTA1Q9Y6Y1 1673 aa39.62■■■■□ 3.93
PDCD2-201ENST00000167218 TTC21AQ8NDW8 1320 aa39.61■■■■□ 3.93
PDCD2-201ENST00000167218 SLC12A5Q9H2X9 1139 aa39.6■■■■□ 3.93
PDCD2-201ENST00000167218 FAM98CQ17RN3 349 aaKnown RBP39.59■■■■□ 3.93
PDCD2-201ENST00000167218 USP47Q96K76 1375 aa39.58■■■■□ 3.93
PDCD2-201ENST00000167218 TMC1Q8TDI8 760 aa39.57■■■■□ 3.93
PDCD2-201ENST00000167218 STRN4Q9NRL3 753 aa39.57■■■■□ 3.93
PDCD2-201ENST00000167218 SPATA31A1Q5TZJ5 1347 aa39.56■■■■□ 3.92
PDCD2-201ENST00000167218 SLC24A1O60721 1099 aa39.55■■■■□ 3.92
PDCD2-201ENST00000167218 THSD7AQ9UPZ6 1657 aa39.51■■■■□ 3.91
PDCD2-201ENST00000167218 KRT27Q7Z3Y8 459 aa39.5■■■■□ 3.91
PDCD2-201ENST00000167218 COL18A1P39060 1754 aa39.49■■■■□ 3.91
PDCD2-201ENST00000167218 EVA1CP58658 441 aa39.49■■■■□ 3.91
PDCD2-201ENST00000167218 HDGFL2Q7Z4V5 671 aaPredicted RBP39.49■■■■□ 3.91
PDCD2-201ENST00000167218 CCER1Q8TC90 406 aaPredicted RBP39.49■■■■□ 3.91
PDCD2-201ENST00000167218 A0A1W2PP64 1363 aa39.48■■■■□ 3.91
PDCD2-201ENST00000167218 AATKQ6ZMQ8 1374 aa39.48■■■■□ 3.91
PDCD2-201ENST00000167218 USP31Q70CQ4 1352 aa39.47■■■■□ 3.91
PDCD2-201ENST00000167218 LARP1Q6PKG0 1096 aaKnown RBP39.47■■■■□ 3.91
PDCD2-201ENST00000167218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.47■■■■□ 3.91
PDCD2-201ENST00000167218 ZRANB1Q9UGI0 708 aa39.47■■■■□ 3.91
PDCD2-201ENST00000167218 COL5A2P05997 1499 aaPredicted RBP39.46■■■■□ 3.91
PDCD2-201ENST00000167218 A0A0G2JS52 829 aa39.46■■■■□ 3.91
PDCD2-201ENST00000167218 MYT1Q01538 1121 aa39.46■■■■□ 3.91
PDCD2-201ENST00000167218 CCDC125Q86Z20 511 aa39.46■■■■□ 3.91
PDCD2-201ENST00000167218 KCNH5Q8NCM2 988 aa39.46■■■■□ 3.91
PDCD2-201ENST00000167218 TERF2IPQ9NYB0 399 aa39.46■■■■□ 3.91
PDCD2-201ENST00000167218 USP54Q70EL1 1684 aa39.45■■■■□ 3.91
PDCD2-201ENST00000167218 NINLQ9Y2I6 1382 aa39.45■■■■□ 3.91
PDCD2-201ENST00000167218 EDC4Q6P2E9 1401 aaKnown RBP39.44■■■■□ 3.9
PDCD2-201ENST00000167218 ARHGEF25Q86VW2 580 aa39.44■■■■□ 3.9
PDCD2-201ENST00000167218 NME9Q86XW9 330 aa39.43■■■■□ 3.9
PDCD2-201ENST00000167218 NFAT5O94916 1531 aa39.43■■■■□ 3.9
PDCD2-201ENST00000167218 ZBTB7CA1YPR0 619 aa39.42■■■■□ 3.9
PDCD2-201ENST00000167218 TMF1P82094 1093 aa39.42■■■■□ 3.9
PDCD2-201ENST00000167218 BARGINQ6ZT62 677 aa39.4■■■■□ 3.9
PDCD2-201ENST00000167218 USP35Q9P2H5 1018 aa39.4■■■■□ 3.9
PDCD2-201ENST00000167218 AXIN2Q9Y2T1 843 aa39.4■■■■□ 3.9
PDCD2-201ENST00000167218 BLMP54132 1417 aaPredicted RBP39.39■■■■□ 3.9
PDCD2-201ENST00000167218 SOX12O15370 315 aa39.38■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms