RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 ZNF445P59923 1031 aa18.44■□□□□ 0.54
PDZD4-201ENST00000164640 ZNF500O60304 480 aaPredicted RBP18.44■□□□□ 0.54
PDZD4-201ENST00000164640 TERF1P54274 439 aa18.43■□□□□ 0.54
PDZD4-201ENST00000164640 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
PDZD4-201ENST00000164640 TSPY26PQ9H489 355 aa18.43■□□□□ 0.54
PDZD4-201ENST00000164640 ZNF771Q7L3S4 317 aaPredicted RBP18.43■□□□□ 0.54
PDZD4-201ENST00000164640 SYAP1Q96A49 352 aaPredicted RBP18.43■□□□□ 0.54
PDZD4-201ENST00000164640 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
PDZD4-201ENST00000164640 HS1BP3Q53T59 392 aa18.43■□□□□ 0.54
PDZD4-201ENST00000164640 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
PDZD4-201ENST00000164640 ITSN2Q9NZM3 1697 aa18.42■□□□□ 0.54
PDZD4-201ENST00000164640 DDIT3P35638 169 aa18.42■□□□□ 0.54
PDZD4-201ENST00000164640 LRSAM1Q6UWE0 723 aa18.42■□□□□ 0.54
PDZD4-201ENST00000164640 CDK11BP21127 795 aaKnown RBP18.42■□□□□ 0.54
PDZD4-201ENST00000164640 NEK4P51957 841 aa18.42■□□□□ 0.54
PDZD4-201ENST00000164640 CHMP4BQ9H444 224 aaKnown RBP18.42■□□□□ 0.54
PDZD4-201ENST00000164640 TMEM63CQ9P1W3 806 aa18.42■□□□□ 0.54
PDZD4-201ENST00000164640 GCC1Q96CN9 775 aa18.41■□□□□ 0.54
PDZD4-201ENST00000164640 KIF2CQ99661 725 aa18.41■□□□□ 0.54
PDZD4-201ENST00000164640 TTC12Q9H892 705 aaPredicted RBP18.41■□□□□ 0.54
PDZD4-201ENST00000164640 USP25Q9UHP3 1055 aa18.41■□□□□ 0.54
PDZD4-201ENST00000164640 PLA2R1Q13018 1463 aa18.41■□□□□ 0.54
PDZD4-201ENST00000164640 DISP1Q96F81 1524 aa18.41■□□□□ 0.54
PDZD4-201ENST00000164640 SRPK2P78362 688 aaKnown RBP18.41■□□□□ 0.54
PDZD4-201ENST00000164640 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDZD4-201ENST00000164640 PRDM15P57071 1507 aaPredicted RBP18.41■□□□□ 0.54
PDZD4-201ENST00000164640 MAPK8IP2Q13387 824 aaPredicted RBP18.41■□□□□ 0.54
PDZD4-201ENST00000164640 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
PDZD4-201ENST00000164640 POLR3AO14802 1390 aaPredicted RBP18.4■□□□□ 0.54
PDZD4-201ENST00000164640 GPT2Q8TD30 523 aa18.4■□□□□ 0.54
PDZD4-201ENST00000164640 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
PDZD4-201ENST00000164640 ABCC2Q92887 1545 aa18.4■□□□□ 0.54
PDZD4-201ENST00000164640 ZMYM3Q14202 1370 aa18.4■□□□□ 0.54
PDZD4-201ENST00000164640 KIF3BO15066 747 aa18.39■□□□□ 0.54
PDZD4-201ENST00000164640 INTS3Q68E01 1043 aaKnown RBP18.39■□□□□ 0.54
PDZD4-201ENST00000164640 STK26Q9P289 416 aa18.39■□□□□ 0.54
PDZD4-201ENST00000164640 CCDC141Q6ZP82 1450 aa18.39■□□□□ 0.53
PDZD4-201ENST00000164640 C16orf71Q8IYS4 520 aaPredicted RBP18.39■□□□□ 0.53
PDZD4-201ENST00000164640 KIF3AQ9Y496 699 aa18.39■□□□□ 0.53
PDZD4-201ENST00000164640 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
PDZD4-201ENST00000164640 NSFL1CQ9UNZ2 370 aaKnown RBP18.38■□□□□ 0.53
PDZD4-201ENST00000164640 EIF4G3O43432 1585 aaKnown RBP18.38■□□□□ 0.53
PDZD4-201ENST00000164640 ADGRF5Q8IZF2 1346 aa18.38■□□□□ 0.53
PDZD4-201ENST00000164640 BBXQ8WY36 941 aaPredicted RBP18.38■□□□□ 0.53
PDZD4-201ENST00000164640 SPC24Q8NBT2 197 aa18.37■□□□□ 0.53
PDZD4-201ENST00000164640 MBD3O95983 291 aa18.37■□□□□ 0.53
PDZD4-201ENST00000164640 CWC22Q9HCG8 908 aaKnown RBP18.37■□□□□ 0.53
PDZD4-201ENST00000164640 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
PDZD4-201ENST00000164640 MCM5P33992 734 aa18.37■□□□□ 0.53
PDZD4-201ENST00000164640 HMGN5P82970 282 aaKnown RBP18.37■□□□□ 0.53
PDZD4-201ENST00000164640 CABP2Q9NPB3 220 aa18.37■□□□□ 0.53
PDZD4-201ENST00000164640 CT47B1P0C2W7 299 aaPredicted RBP18.36■□□□□ 0.53
PDZD4-201ENST00000164640 PDCL2Q8N4E4 241 aa18.36■□□□□ 0.53
PDZD4-201ENST00000164640 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.36■□□□□ 0.53
PDZD4-201ENST00000164640 SMARCA5O60264 1052 aaPredicted RBP18.36■□□□□ 0.53
PDZD4-201ENST00000164640 PTPRGP23470 1445 aa18.35■□□□□ 0.53
PDZD4-201ENST00000164640 NUP160Q12769 1436 aa18.35■□□□□ 0.53
PDZD4-201ENST00000164640 HMOX1P09601 288 aa18.35■□□□□ 0.53
PDZD4-201ENST00000164640 DRC7Q8IY82 874 aa18.35■□□□□ 0.53
PDZD4-201ENST00000164640 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
PDZD4-201ENST00000164640 PHF14O94880 888 aa18.35■□□□□ 0.53
PDZD4-201ENST00000164640 NOLC1Q14978 699 aaKnown RBP eCLIP18.35■□□□□ 0.53
PDZD4-201ENST00000164640 NPC1L1Q9UHC9 1359 aa18.34■□□□□ 0.53
PDZD4-201ENST00000164640 CHMP3Q9Y3E7 222 aa18.34■□□□□ 0.53
PDZD4-201ENST00000164640 CCDC27Q2M243 656 aa18.34■□□□□ 0.53
PDZD4-201ENST00000164640 REC8O95072 547 aa18.34■□□□□ 0.53
PDZD4-201ENST00000164640 CGNQ9P2M7 1197 aaKnown RBP18.33■□□□□ 0.52
PDZD4-201ENST00000164640 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.52
PDZD4-201ENST00000164640 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
PDZD4-201ENST00000164640 DMTNQ08495 405 aa18.32■□□□□ 0.52
PDZD4-201ENST00000164640 MYRIPQ8NFW9 859 aa18.32■□□□□ 0.52
PDZD4-201ENST00000164640 CLASP1Q7Z460 1538 aa18.32■□□□□ 0.52
PDZD4-201ENST00000164640 PDLIM2Q96JY6 352 aa18.31■□□□□ 0.52
PDZD4-201ENST00000164640 SPAG9O60271 1321 aaKnown RBP18.31■□□□□ 0.52
PDZD4-201ENST00000164640 NCOA3Q9Y6Q9 1424 aa18.31■□□□□ 0.52
PDZD4-201ENST00000164640 SHANK2Q9UPX8 1470 aa18.31■□□□□ 0.52
PDZD4-201ENST00000164640 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
PDZD4-201ENST00000164640 EIF2AK4Q9P2K8 1649 aaKnown RBP18.31■□□□□ 0.52
PDZD4-201ENST00000164640 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
PDZD4-201ENST00000164640 CFAP44Q96MT7 982 aa18.31■□□□□ 0.52
PDZD4-201ENST00000164640 DIAPH1O60610 1272 aaKnown RBP18.31■□□□□ 0.52
PDZD4-201ENST00000164640 ADCY5O95622 1261 aa18.31■□□□□ 0.52
PDZD4-201ENST00000164640 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
PDZD4-201ENST00000164640 ANO2Q9NQ90 1003 aa18.31■□□□□ 0.52
PDZD4-201ENST00000164640 VIRMAQ69YN4 1812 aaKnown RBP18.3■□□□□ 0.52
PDZD4-201ENST00000164640 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
PDZD4-201ENST00000164640 ATAD2Q6PL18 1390 aa18.3■□□□□ 0.52
PDZD4-201ENST00000164640 HCLS1P14317 486 aaPredicted RBP18.3■□□□□ 0.52
PDZD4-201ENST00000164640 MCCP23508 829 aa18.29■□□□□ 0.52
PDZD4-201ENST00000164640 IBTKQ9P2D0 1353 aaPredicted RBP18.29■□□□□ 0.52
PDZD4-201ENST00000164640 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
PDZD4-201ENST00000164640 PRKAR2BP31323 418 aa18.29■□□□□ 0.52
PDZD4-201ENST00000164640 ZNF592Q92610 1267 aa18.29■□□□□ 0.52
PDZD4-201ENST00000164640 UPF3BQ9BZI7 483 aaKnown RBP18.29■□□□□ 0.52
PDZD4-201ENST00000164640 U2AF2P26368 475 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDZD4-201ENST00000164640 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
PDZD4-201ENST00000164640 TRIM35Q9UPQ4 493 aa18.29■□□□□ 0.52
PDZD4-201ENST00000164640 EFCAB2Q5VUJ9 269 aa18.28■□□□□ 0.52
PDZD4-201ENST00000164640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.28■□□□□ 0.52
PDZD4-201ENST00000164640 USP26Q9BXU7 913 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms