RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 FBXO31Q5XUX0 539 aaPredicted RBP20.83■□□□□ 0.93
CTDP1-201ENST00000075430 RBM27Q9P2N5 1060 aaKnown RBP20.83■□□□□ 0.93
CTDP1-201ENST00000075430 EVC2Q86UK5 1308 aa20.83■□□□□ 0.92
CTDP1-201ENST00000075430 C16orf71Q8IYS4 520 aaPredicted RBP20.82■□□□□ 0.92
CTDP1-201ENST00000075430 NLRP1Q9C000 1473 aa20.82■□□□□ 0.92
CTDP1-201ENST00000075430 PKP1Q13835 747 aa20.82■□□□□ 0.92
CTDP1-201ENST00000075430 CD109Q6YHK3 1445 aa20.81■□□□□ 0.92
CTDP1-201ENST00000075430 TBC1D9Q6ZT07 1266 aa20.81■□□□□ 0.92
CTDP1-201ENST00000075430 ABCC1P33527 1531 aa20.81■□□□□ 0.92
CTDP1-201ENST00000075430 XPCQ01831 940 aaPredicted RBP20.81■□□□□ 0.92
CTDP1-201ENST00000075430 IPO8O15397 1037 aaKnown RBP20.81■□□□□ 0.92
CTDP1-201ENST00000075430 PRAM1Q96QH2 718 aa20.81■□□□□ 0.92
CTDP1-201ENST00000075430 DTNBO60941 627 aa20.8■□□□□ 0.92
CTDP1-201ENST00000075430 PRPF40AO75400 957 aaKnown RBP20.8■□□□□ 0.92
CTDP1-201ENST00000075430 PLCB2Q00722 1185 aa20.8■□□□□ 0.92
CTDP1-201ENST00000075430 CALD1Q05682 793 aaKnown RBP20.8■□□□□ 0.92
CTDP1-201ENST00000075430 DCTN1Q14203 1278 aa20.8■□□□□ 0.92
CTDP1-201ENST00000075430 TSPYL6Q8N831 410 aa20.8■□□□□ 0.92
CTDP1-201ENST00000075430 SMARCA5O60264 1052 aaPredicted RBP20.78■□□□□ 0.92
CTDP1-201ENST00000075430 PRKAR2BP31323 418 aa20.78■□□□□ 0.92
CTDP1-201ENST00000075430 IQGAP3Q86VI3 1631 aa20.78■□□□□ 0.92
CTDP1-201ENST00000075430 UNC13BO14795 1591 aa20.78■□□□□ 0.92
CTDP1-201ENST00000075430 ESF1Q9H501 851 aaKnown RBP20.78■□□□□ 0.92
CTDP1-201ENST00000075430 C14orf93Q9H972 538 aaKnown RBP20.78■□□□□ 0.92
CTDP1-201ENST00000075430 EIF2AK4Q9P2K8 1649 aaKnown RBP20.78■□□□□ 0.92
CTDP1-201ENST00000075430 K7ELQ4 463 aaPredicted RBP20.78■□□□□ 0.92
CTDP1-201ENST00000075430 TRIM35Q9UPQ4 493 aa20.78■□□□□ 0.92
CTDP1-201ENST00000075430 ATP7AQ04656 1500 aa20.77■□□□□ 0.92
CTDP1-201ENST00000075430 POLR3AO14802 1390 aaPredicted RBP20.77■□□□□ 0.92
CTDP1-201ENST00000075430 NGEFQ8N5V2 710 aa20.77■□□□□ 0.91
CTDP1-201ENST00000075430 ZBTB40Q9NUA8 1239 aa20.77■□□□□ 0.91
CTDP1-201ENST00000075430 PTMAP06454 111 aaKnown RBP20.76■□□□□ 0.91
CTDP1-201ENST00000075430 ZNF692Q9BU19 519 aaPredicted RBP20.76■□□□□ 0.91
CTDP1-201ENST00000075430 PLEKHG5O94827 1062 aa20.75■□□□□ 0.91
CTDP1-201ENST00000075430 DNTTIP2Q5QJE6 756 aaKnown RBP20.75■□□□□ 0.91
CTDP1-201ENST00000075430 SMC5Q8IY18 1101 aa20.75■□□□□ 0.91
CTDP1-201ENST00000075430 OTUD7AQ8TE49 926 aaPredicted RBP20.75■□□□□ 0.91
CTDP1-201ENST00000075430 RTEL1-TNFRSF6BF6WH68 1400 aa20.75■□□□□ 0.91
CTDP1-201ENST00000075430 ERVK-7P63135 1459 aa20.74■□□□□ 0.91
CTDP1-201ENST00000075430 NINLQ9Y2I6 1382 aa20.74■□□□□ 0.91
CTDP1-201ENST00000075430 DIAPH1O60610 1272 aaKnown RBP20.74■□□□□ 0.91
CTDP1-201ENST00000075430 NUCB1Q02818 461 aa20.74■□□□□ 0.91
CTDP1-201ENST00000075430 ZGPATQ8N5A5 531 aaKnown RBP20.74■□□□□ 0.91
CTDP1-201ENST00000075430 FAM83GA6ND36 823 aa20.73■□□□□ 0.91
CTDP1-201ENST00000075430 TSHZ3Q63HK5 1081 aa20.73■□□□□ 0.91
CTDP1-201ENST00000075430 RRP9O43818 475 aaKnown RBP20.73■□□□□ 0.91
CTDP1-201ENST00000075430 BAG4O95429 457 aaKnown RBP20.73■□□□□ 0.91
CTDP1-201ENST00000075430 CLTCL1P53675 1640 aa20.73■□□□□ 0.91
CTDP1-201ENST00000075430 HDAC1Q13547 482 aaPredicted RBP20.73■□□□□ 0.91
CTDP1-201ENST00000075430 WAPLQ7Z5K2 1190 aa20.73■□□□□ 0.91
CTDP1-201ENST00000075430 CABP1Q9NZU7 370 aa20.73■□□□□ 0.91
CTDP1-201ENST00000075430 PLXNC1O60486 1568 aa20.72■□□□□ 0.91
CTDP1-201ENST00000075430 FAM69CQ0P6D2 419 aa20.72■□□□□ 0.91
CTDP1-201ENST00000075430 RAB3GAP1Q15042 981 aa20.72■□□□□ 0.91
CTDP1-201ENST00000075430 BCL11BQ9C0K0 894 aaPredicted RBP20.72■□□□□ 0.91
CTDP1-201ENST00000075430 ZFYVE16Q7Z3T8 1539 aa20.71■□□□□ 0.91
CTDP1-201ENST00000075430 KRT24Q2M2I5 525 aa20.71■□□□□ 0.91
CTDP1-201ENST00000075430 SLC4A10Q6U841 1118 aa20.71■□□□□ 0.91
CTDP1-201ENST00000075430 PRDM10Q9NQV6 1147 aa20.71■□□□□ 0.91
CTDP1-201ENST00000075430 HDGFL2Q7Z4V5 671 aaPredicted RBP20.7■□□□□ 0.9
CTDP1-201ENST00000075430 PHACTR3Q96KR7 559 aa20.7■□□□□ 0.9
CTDP1-201ENST00000075430 TERF2IPQ9NYB0 399 aa20.7■□□□□ 0.9
CTDP1-201ENST00000075430 GDPD2Q9HCC8 539 aa20.69■□□□□ 0.9
CTDP1-201ENST00000075430 PTPRTO14522 1441 aa20.69■□□□□ 0.9
CTDP1-201ENST00000075430 SYCE3A1L190 88 aa20.69■□□□□ 0.9
CTDP1-201ENST00000075430 PRIM1P49642 420 aaKnown RBP20.68■□□□□ 0.9
CTDP1-201ENST00000075430 SKOR2Q2VWA4 1001 aaPredicted RBP20.68■□□□□ 0.9
CTDP1-201ENST00000075430 TRPM2O94759 1503 aa20.68■□□□□ 0.9
CTDP1-201ENST00000075430 KIF2CQ99661 725 aa20.67■□□□□ 0.9
CTDP1-201ENST00000075430 KIF16BQ96L93 1317 aa20.67■□□□□ 0.9
CTDP1-201ENST00000075430 AK9Q5TCS8 1911 aa20.67■□□□□ 0.9
CTDP1-201ENST00000075430 NECTIN2Q92692 538 aa20.67■□□□□ 0.9
CTDP1-201ENST00000075430 FAM177BA6PVY3 158 aa20.66■□□□□ 0.9
CTDP1-201ENST00000075430 AAMPQ13685 434 aa20.66■□□□□ 0.9
CTDP1-201ENST00000075430 NPATQ14207 1427 aa20.66■□□□□ 0.9
CTDP1-201ENST00000075430 JARID2Q92833 1246 aaPredicted RBP20.66■□□□□ 0.9
CTDP1-201ENST00000075430 CDK19Q9BWU1 502 aa20.66■□□□□ 0.9
CTDP1-201ENST00000075430 RBSNQ9H1K0 784 aa20.66■□□□□ 0.9
CTDP1-201ENST00000075430 ZSCAN30Q86W11 494 aa20.66■□□□□ 0.9
CTDP1-201ENST00000075430 TSC1Q92574 1164 aa20.66■□□□□ 0.9
CTDP1-201ENST00000075430 NPC1L1Q9UHC9 1359 aa20.65■□□□□ 0.9
CTDP1-201ENST00000075430 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
CTDP1-201ENST00000075430 LARP6Q9BRS8 491 aaKnown RBP20.65■□□□□ 0.9
CTDP1-201ENST00000075430 SYNMO15061 1565 aa20.65■□□□□ 0.9
CTDP1-201ENST00000075430 MADDQ8WXG6 1647 aa20.64■□□□□ 0.9
CTDP1-201ENST00000075430 CDC45O75419 566 aa20.64■□□□□ 0.9
CTDP1-201ENST00000075430 FYB1O15117 783 aa20.64■□□□□ 0.89
CTDP1-201ENST00000075430 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.89
CTDP1-201ENST00000075430 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
CTDP1-201ENST00000075430 ZRANB1Q9UGI0 708 aa20.64■□□□□ 0.89
CTDP1-201ENST00000075430 UHRF1BP1LA0JNW5 1464 aa20.64■□□□□ 0.89
CTDP1-201ENST00000075430 CCDC173Q0VFZ6 552 aa20.64■□□□□ 0.89
CTDP1-201ENST00000075430 BMP2KLQ5H9B9 411 aa20.64■□□□□ 0.89
CTDP1-201ENST00000075430 EMILIN1Q9Y6C2 1016 aa20.63■□□□□ 0.89
CTDP1-201ENST00000075430 ZSCAN23Q3MJ62 389 aa20.63■□□□□ 0.89
CTDP1-201ENST00000075430 SIRT2Q8IXJ6 389 aa20.63■□□□□ 0.89
CTDP1-201ENST00000075430 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
CTDP1-201ENST00000075430 TWISTNBQ3B726 338 aaPredicted RBP20.62■□□□□ 0.89
CTDP1-201ENST00000075430 RRS1Q15050 365 aaKnown RBP20.62■□□□□ 0.89
CTDP1-201ENST00000075430 ZBTB7BO15156 539 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms