RNA–Protein interactions for RNA: ENSMUST00000107537.4

Ube3a-201, Transcript of Ubiquitin-protein ligase E3A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ube3a, Length 4,911 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-201ENSMUST00000107537 Tdrd9Q14BI7 1383 aa16.48■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Ttll5Q8CHB8 1328 aa16.48■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Slc13a4Q8BZ82 625 aa16.48■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Secisbp2lQ6A098 1086 aaKnown RBP16.48■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Mctp1E9PV86 951 aa16.48■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Lamb3Q61087 1168 aa16.48■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Cavin4A2AMM0 362 aa16.47■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Nat10Q8K224 1024 aaKnown RBP16.47■□□□□ 0.23
Ube3a-201ENSMUST00000107537 TatQ8QZR1 454 aa16.47■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Ppp4r3bQ922R5 820 aa16.47■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Puf60Q3UEB3 564 aaKnown RBP16.47■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Nphp1Q9QY53 687 aa16.46■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Gnl3lQ6PGG6 577 aaKnown RBP16.46■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Kif18aQ91WD7 886 aa16.46■□□□□ 0.23
Ube3a-201ENSMUST00000107537 Syce3B5KM66 88 aa16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 NcapgE9PWG6 1004 aa16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Nol8Q3UHX0 1147 aaKnown RBP16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Ccdc96Q9CR92 584 aa16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Atp2b2Q9R0K7 1198 aa16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Gbp4Q61107 620 aa16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Ppp2r1aQ76MZ3 589 aa16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 OptnQ8K3K8 584 aa16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Eif3aP23116 1344 aaKnown RBP16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Gcc1Q9D4H2 778 aa16.45■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Dhx8A2A4P0 1244 aaKnown RBP16.44■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Erich4Q3UNU4 136 aa16.44■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Synj1Q8CHC4 1574 aa16.44■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Gnai2P08752 355 aaKnown RBP16.44■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Ccdc181Q80ZU5 509 aa16.44■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Pmfbp1Q9WVQ0 1022 aa16.44■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Map9Q3TRR0 646 aa16.44■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Tango6Q8C3S2 1079 aa16.44■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Gm10471E9Q1C7 252 aa16.43■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Prpf4bQ61136 1007 aaKnown RBP16.43■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Kif20aP97329 887 aa16.43■□□□□ 0.22
Ube3a-201ENSMUST00000107537 DmtnQ9WV69 405 aa16.43■□□□□ 0.22
Ube3a-201ENSMUST00000107537 WrnO09053 1401 aa16.43■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Pip4k2aO70172 405 aa16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Mex3cQ05A36 652 aaKnown RBP16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Chrna2Q91X60 512 aa16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Larp1Q6ZQ58 1072 aaKnown RBP16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Sytl4Q9R0Q1 673 aa16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Krt85Q9Z2T6 507 aa16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Otud6bQ8K2H2 294 aa16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Trim25Q61510 634 aaKnown RBP16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Erlin2Q8BFZ9 340 aa16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Dhx29Q6PGC1 1365 aaKnown RBP16.42■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Fam184aE9PW83 1143 aa16.41■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Tubb6Q922F4 447 aa16.41■□□□□ 0.22
Ube3a-201ENSMUST00000107537 FanciQ8K368 1330 aa16.41■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Spag5Q7TME2 1165 aa16.41■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Samm50Q8BGH2 469 aa16.41■□□□□ 0.22
Ube3a-201ENSMUST00000107537 TbcaP48428 108 aaKnown RBP16.41■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Tfip11Q9ERA6 838 aaKnown RBP16.41■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Themis2Q91YX0 663 aa16.4■□□□□ 0.22
Ube3a-201ENSMUST00000107537 HypkQ9CR41 129 aa16.4■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Luc7lQ9CYI4 371 aaKnown RBP16.4■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Phldb2Q8K1N2 1249 aa16.4■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Gnl2Q99LH1 728 aaKnown RBP16.4■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Ankrd36D3Z4K0 1415 aa16.4■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Nsd2Q8BVE8 1365 aa16.4■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Fkbp4P30416 458 aa16.4■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Sel1lQ9Z2G6 790 aa16.4■□□□□ 0.22
Ube3a-201ENSMUST00000107537 Gm42641I6L9G2 585 aa16.39■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Mcm4P49717 862 aa16.39■□□□□ 0.21
Ube3a-201ENSMUST00000107537 AtripQ8BMG1 785 aa16.39■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Q9D9H8 365 aa16.39■□□□□ 0.21
Ube3a-201ENSMUST00000107537 PsapQ61207 557 aaKnown RBP16.39■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Abcd1P48410 736 aa16.38■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Cwc27Q3TKY6 469 aa16.38■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Washc4Q3UMB9 1173 aa16.38■□□□□ 0.21
Ube3a-201ENSMUST00000107537 CenpqQ9CPQ5 267 aa16.38■□□□□ 0.21
Ube3a-201ENSMUST00000107537 MicalclQ9D5U9 680 aa16.38■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Rab3gap2Q8BMG7 1366 aa16.38■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Cc2d2bA0A286YDU8 1405 aa16.38■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Ccdc83Q9D4V3 305 aa16.38■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Stim1P70302 685 aa16.37■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Cnnm1Q0GA42 951 aa16.37■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Ehmt1Q5DW34 1296 aa16.37■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Rad54l2Q99NG0 1466 aa16.37■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Pde4cQ3UEI1 686 aa16.37■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Nup88Q8CEC0 753 aaKnown RBP16.37■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Cpa2Q504N0 417 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Cfap58B2RW38 873 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Stard3nlQ9DCI3 235 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Zfp644E9QA22 1323 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 MpripP97434 1024 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Fsd1Q7TPM6 496 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Ppm1eQ80TL0 749 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Cep57l1Q8VDS7 400 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Pafah1b1P63005 410 aaKnown RBP16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Zranb3Q6NZP1 1069 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Med4Q9CQA5 270 aa16.36■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Dusp27Q148W8 1138 aa16.35■□□□□ 0.21
Ube3a-201ENSMUST00000107537 CftrP26361 1476 aa16.35■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Prl7d1P04769 244 aa16.35■□□□□ 0.21
Ube3a-201ENSMUST00000107537 TefQ9JLC6 301 aa16.35■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Rbm5Q91YE7 815 aaKnown RBP16.35■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Top1mtQ8R4U6 593 aa16.34■□□□□ 0.21
Ube3a-201ENSMUST00000107537 Smg7Q5RJH6 1138 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms