RNA–Protein interactions for RNA: ENSMUST00000042724.7

Usp38-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp38, Length 4,707 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp38-201ENSMUST00000042724 Ccdc47Q9D024 483 aaKnown RBP18.57■□□□□ 0.56
Usp38-201ENSMUST00000042724 Ubap1lG3UW59 384 aa18.57■□□□□ 0.56
Usp38-201ENSMUST00000042724 Nek4Q9Z1J2 792 aa18.57■□□□□ 0.56
Usp38-201ENSMUST00000042724 Rnf20Q5DTM8 973 aa18.57■□□□□ 0.56
Usp38-201ENSMUST00000042724 CrebrfQ8CDG5 640 aaKnown RBP18.56■□□□□ 0.56
Usp38-201ENSMUST00000042724 PhaxQ9JJT9 385 aaKnown RBP18.56■□□□□ 0.56
Usp38-201ENSMUST00000042724 Ddx54Q8K4L0 874 aaKnown RBP18.56■□□□□ 0.56
Usp38-201ENSMUST00000042724 ZgpatQ8VDM1 511 aa18.56■□□□□ 0.56
Usp38-201ENSMUST00000042724 Tpm3-rs7D3Z2H9 248 aa18.55■□□□□ 0.56
Usp38-201ENSMUST00000042724 4930572O03RikQ8C5Y0 211 aa18.55■□□□□ 0.56
Usp38-201ENSMUST00000042724 Abcc2Q8VI47 1543 aa18.55■□□□□ 0.56
Usp38-201ENSMUST00000042724 Lrrc9Q8CDN9 1456 aa18.55■□□□□ 0.56
Usp38-201ENSMUST00000042724 Cpsf1Q9EPU4 1441 aaKnown RBP18.54■□□□□ 0.56
Usp38-201ENSMUST00000042724 Supt6hQ62383 1726 aaKnown RBP18.54■□□□□ 0.56
Usp38-201ENSMUST00000042724 PtprgQ05909 1442 aa18.54■□□□□ 0.56
Usp38-201ENSMUST00000042724 Zkscan2G3X952 960 aa18.54■□□□□ 0.56
Usp38-201ENSMUST00000042724 TnikP83510 1323 aa18.54■□□□□ 0.56
Usp38-201ENSMUST00000042724 Rrbp1Q99PL5 1605 aaKnown RBP18.53■□□□□ 0.56
Usp38-201ENSMUST00000042724 InsrP15208 1372 aa18.53■□□□□ 0.56
Usp38-201ENSMUST00000042724 Speer4bQ9D9F7 267 aa18.53■□□□□ 0.56
Usp38-201ENSMUST00000042724 Sf3b2Q3UJB0 878 aaKnown RBP18.53■□□□□ 0.56
Usp38-201ENSMUST00000042724 Ccer1Q9CQL2 403 aa18.52■□□□□ 0.56
Usp38-201ENSMUST00000042724 Nphp1Q9QY53 687 aa18.52■□□□□ 0.56
Usp38-201ENSMUST00000042724 Gcc1Q9D4H2 778 aa18.52■□□□□ 0.56
Usp38-201ENSMUST00000042724 Mug2P28666 1451 aa18.52■□□□□ 0.55
Usp38-201ENSMUST00000042724 Slc12a5Q91V14 1138 aa18.52■□□□□ 0.55
Usp38-201ENSMUST00000042724 Phactr2B1AVP0 632 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Gm21680A0A0G2JGR8 267 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Dennd4bQ3U1Y4 1499 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Talpid3E9PV87 1520 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Gm21663A0A0G2JE01 267 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Gm7361D3Z6R1 267 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 5031410I06RikE9Q4E0 267 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Gm1979E9QAN3 267 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Gm5862K7N5V5 267 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Gm10220K7N660 267 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Cplx2P84086 134 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 BcanQ61361 883 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 4933402E13RikQ9D4D2 429 aa18.51■□□□□ 0.55
Usp38-201ENSMUST00000042724 Arhgef11Q68FM7 1552 aa18.5■□□□□ 0.55
Usp38-201ENSMUST00000042724 Eif3aP23116 1344 aaKnown RBP18.5■□□□□ 0.55
Usp38-201ENSMUST00000042724 VgfQ0VGU4 617 aa18.5■□□□□ 0.55
Usp38-201ENSMUST00000042724 SlkO54988 1233 aa18.5■□□□□ 0.55
Usp38-201ENSMUST00000042724 Abcc6Q9R1S7 1498 aa18.5■□□□□ 0.55
Usp38-201ENSMUST00000042724 Stard3nlQ9DCI3 235 aa18.49■□□□□ 0.55
Usp38-201ENSMUST00000042724 Bcl11aQ9QYE3 773 aa18.49■□□□□ 0.55
Usp38-201ENSMUST00000042724 Lrriq1Q0P5X1 1673 aa18.49■□□□□ 0.55
Usp38-201ENSMUST00000042724 Gcc2Q8CHG3 1679 aa18.49■□□□□ 0.55
Usp38-201ENSMUST00000042724 Atxn3Q9CVD2 355 aa18.49■□□□□ 0.55
Usp38-201ENSMUST00000042724 Gli2Q0VGT2 1544 aa18.49■□□□□ 0.55
Usp38-201ENSMUST00000042724 MvpQ9EQK5 861 aa18.48■□□□□ 0.55
Usp38-201ENSMUST00000042724 Cyb5rlB1AS42 316 aa18.48■□□□□ 0.55
Usp38-201ENSMUST00000042724 Nap1l3Q794H2 544 aa18.48■□□□□ 0.55
Usp38-201ENSMUST00000042724 Glipr1l2Q9CQ35 332 aa18.48■□□□□ 0.55
Usp38-201ENSMUST00000042724 Znf518aB2RRF6 1478 aaKnown RBP18.48■□□□□ 0.55
Usp38-201ENSMUST00000042724 Btbd11Q6GQW0 1109 aa18.47■□□□□ 0.55
Usp38-201ENSMUST00000042724 Maco1Q7TQE6 664 aaKnown RBP18.47■□□□□ 0.55
Usp38-201ENSMUST00000042724 Eif3bQ8JZQ9 803 aaKnown RBP18.47■□□□□ 0.55
Usp38-201ENSMUST00000042724 Hoxb7P09024 217 aa18.46■□□□□ 0.55
Usp38-201ENSMUST00000042724 Aldh1l1Q8R0Y6 902 aa18.46■□□□□ 0.55
Usp38-201ENSMUST00000042724 Fmn2Q9JL04 1578 aa18.46■□□□□ 0.55
Usp38-201ENSMUST00000042724 Eif4g3Q80XI3 1579 aaKnown RBP18.46■□□□□ 0.55
Usp38-201ENSMUST00000042724 Eva1cP58659 440 aa18.46■□□□□ 0.55
Usp38-201ENSMUST00000042724 GnpatP98192 678 aa18.46■□□□□ 0.55
Usp38-201ENSMUST00000042724 Hoxa7P02830 229 aa18.45■□□□□ 0.54
Usp38-201ENSMUST00000042724 Ccne1Q61457 408 aa18.45■□□□□ 0.54
Usp38-201ENSMUST00000042724 CrcpO35427 148 aa18.45■□□□□ 0.54
Usp38-201ENSMUST00000042724 Zeb2Q9R0G7 1215 aa18.45■□□□□ 0.54
Usp38-201ENSMUST00000042724 Naip6Q9JIB6 1403 aa18.45■□□□□ 0.54
Usp38-201ENSMUST00000042724 Cwc27Q3TKY6 469 aa18.44■□□□□ 0.54
Usp38-201ENSMUST00000042724 TimelessQ9R1X4 1197 aa18.44■□□□□ 0.54
Usp38-201ENSMUST00000042724 NinlQ6ZQ12 1394 aa18.44■□□□□ 0.54
Usp38-201ENSMUST00000042724 Tspyl2Q7TQI8 677 aa18.44■□□□□ 0.54
Usp38-201ENSMUST00000042724 Dhx16G3X8X0 1044 aaKnown RBP18.44■□□□□ 0.54
Usp38-201ENSMUST00000042724 Cchcr1Q8K2I2 770 aa18.44■□□□□ 0.54
Usp38-201ENSMUST00000042724 Flad1Q8R123 492 aa18.44■□□□□ 0.54
Usp38-201ENSMUST00000042724 Kif18aQ91WD7 886 aa18.43■□□□□ 0.54
Usp38-201ENSMUST00000042724 Srgap3Q812A2 1099 aa18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 Tnpo1Q8BFY9 898 aaKnown RBP18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 Sf3a1Q8K4Z5 791 aaKnown RBP18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 1700010I14RikQ7TPG0 532 aa18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 Cog6Q8R3I3 657 aa18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 Smc3Q9CW03 1217 aaKnown RBP18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 Stk3Q9JI10 497 aa18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 Naip7Q9JIB3 1402 aa18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 Kank1E9Q238 1360 aa18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 Zmym4A2A791 1549 aaKnown RBP18.42■□□□□ 0.54
Usp38-201ENSMUST00000042724 Exoc6bA6H5Z3 810 aa18.41■□□□□ 0.54
Usp38-201ENSMUST00000042724 Plekhm2Q80TQ5 1018 aa18.41■□□□□ 0.54
Usp38-201ENSMUST00000042724 Evc2Q8K1G2 1220 aa18.41■□□□□ 0.54
Usp38-201ENSMUST00000042724 Mast1Q9R1L5 1570 aa18.41■□□□□ 0.54
Usp38-201ENSMUST00000042724 Zranb1Q7M760 708 aa18.41■□□□□ 0.54
Usp38-201ENSMUST00000042724 Srek1Q8BZX4 494 aaKnown RBP18.41■□□□□ 0.54
Usp38-201ENSMUST00000042724 Tpd52l1O54818 204 aa18.4■□□□□ 0.54
Usp38-201ENSMUST00000042724 Tmem94Q7TSH8 1360 aa18.4■□□□□ 0.54
Usp38-201ENSMUST00000042724 Atf7ipQ7TT18 1306 aa18.4■□□□□ 0.54
Usp38-201ENSMUST00000042724 Prrc2bQ7TPM1 1486 aaKnown RBP18.4■□□□□ 0.54
Usp38-201ENSMUST00000042724 Uspl1Q3ULM6 1089 aa18.4■□□□□ 0.54
Usp38-201ENSMUST00000042724 Farp2Q91VS8 1065 aa18.4■□□□□ 0.54
Usp38-201ENSMUST00000042724 Nol11Q8BJW5 723 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 168.6 ms