RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 CIR1Q86X95 450 aaPredicted RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 DENND1CQ8IV53 801 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 FAM114A1Q8IWE2 563 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 NUP93Q8N1F7 819 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 CFAP52Q8N1V2 620 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 NEK11Q8NG66 645 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 WHAMMQ8TF30 809 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 RNF139Q8WU17 664 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SORCS1Q8WY21 1168 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SUSD6Q92537 303 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SMARCD2Q92925 531 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 USP13Q92995 863 aaPredicted RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 NECTIN4Q96NY8 510 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SLC2A13Q96QE2 648 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 ZSWIM1Q9BR11 485 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 C11orf70Q9BRQ4 267 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 LRFN3Q9BTN0 628 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 TBC1D17Q9HA65 648 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 FBRSL1Q9HCM7 1045 aaKnown RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 ARGLU1Q9NWB6 273 aaPredicted RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 OSER1Q9NX31 292 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 GDAP2Q9NXN4 497 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 MYO1AQ9UBC5 1043 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 MCM8Q9UJA3 840 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SORCS3Q9UPU3 1222 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 PLAAQ9Y263 795 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SH3BP1Q9Y3L3 701 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 TRAV19A0A0A6YYK7 116 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 GOLGA6L9A6NEM1 432 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 TMEM221A6NGB7 291 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 YJEFN3A6XGL0 299 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 E7ENQ6 273 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 H3BQF6 201 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 M0R296 226 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 MAP2K7O14733 419 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SLC16A3O15427 465 aaKnown RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 COCHO43405 550 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 H2AFYO75367 372 aaKnown RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 MOSPD3O75425 235 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 MMEP08473 750 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 RARGP13631 454 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 HMGA1P17096 107 aaKnown RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 CD33P20138 364 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 WARSP23381 471 aaKnown RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 OAS2P29728 719 aaKnown RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 IFNAR2P48551 515 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 ATXN1P54253 815 aaKnown RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SRSF5Q13243 272 aaKnown RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 RALGAPA2Q2PPJ7 1873 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 DCAF6Q58WW2 860 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 RAD9BQ6WBX8 426 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 LEKR1Q6ZMV7 388 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 ZBTB46Q86UZ6 589 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SULF2Q8IWU5 870 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 CMTM8Q8IZV2 173 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 TRIML1Q8N9V2 468 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 DHRS4Q9BTZ2 278 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SMOC1Q9H4F8 434 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 ARHGEF3Q9NR81 526 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 TDP1Q9NUW8 608 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 SPATA6Q9NWH7 488 aaPredicted RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 C2orf42Q9NWW7 574 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 DUS2Q9NX74 493 aaKnown RBP5.16□□□□□ -1.58
SYCP1-209ENST00000613524 CALCOCO1Q9P1Z2 691 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 REV1Q9UBZ9 1251 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 ZNF292O60281 2723 aa5.16□□□□□ -1.58
SYCP1-209ENST00000613524 GOLGA6L7A0A1B0GV03 622 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 FAM47DPA6NHR8 397 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 TMEM110-MUSTN1A8MSY1 372 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 PRSS47A8MTI9 375 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 CHURC1-FNTBB4DL54 471 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 ZNF197O14709 1029 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 PF4V1P10720 104 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 PSMC3P17980 439 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 MSX1P28360 303 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 ATICP31939 592 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 MFAP3P55082 362 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 TOMM20Q15388 145 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 KCTD19Q17RG1 926 aaPredicted RBP5.15□□□□□ -1.58
SYCP1-209ENST00000613524 FILIP1LQ4L180 1135 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 SCYL2Q6P3W7 929 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 ARMCX6Q7L4S7 300 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 C12orf40Q86WS4 652 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 BBS7Q8IWZ6 715 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 C12orf56Q8IXR9 622 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 HPS1Q92902 700 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 PANX2Q96RD6 677 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 CIPCQ9C0C6 399 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 ANKZF1Q9H8Y5 726 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 KIF9Q9HAQ2 790 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 EDARQ9UNE0 448 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 NAALADL1Q9UQQ1 740 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 WASF2Q9Y6W5 498 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 TBC1D3BA6NDS4 549 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 WASH3PC4AMC7 463 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 SRGAP2O75044 1071 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 CYP11A1P05108 521 aa5.15□□□□□ -1.58
SYCP1-209ENST00000613524 HNRNPA1P09651 372 aaKnown RBP eCLIP5.15□□□□□ -1.58
SYCP1-209ENST00000613524 ALADP13716 330 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms