RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 CXorf38Q8TB03 319 aa5.54□□□□□ -1.52
LINC00397-202ENST00000606785 FBXL20Q96IG2 436 aa5.54□□□□□ -1.52
LINC00397-202ENST00000606785 C5orf34Q96MH7 638 aa5.54□□□□□ -1.52
LINC00397-202ENST00000606785 SNX18Q96RF0 628 aa5.54□□□□□ -1.52
LINC00397-202ENST00000606785 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.54□□□□□ -1.52
LINC00397-202ENST00000606785 RNF26Q9BY78 433 aaPredicted RBP5.54□□□□□ -1.52
LINC00397-202ENST00000606785 TESQ9UGI8 421 aaKnown RBP5.54□□□□□ -1.52
LINC00397-202ENST00000606785 TCAF1Q9Y4C2 921 aa5.54□□□□□ -1.52
LINC00397-202ENST00000606785 STARD3NLO95772 234 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 ITGB3P05106 788 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 URODP06132 367 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 CYP4B1P13584 511 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 PCSK6P29122 969 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 SLC8A1P32418 973 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 ABCD1P33897 745 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 SELENOPP49908 381 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 UFM1P61960 85 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 PSG6Q00889 435 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 CREB5Q02930 508 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 LMAN2Q12907 356 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 PRKD1Q15139 912 aaPredicted RBP5.53□□□□□ -1.52
LINC00397-202ENST00000606785 TXNRD1Q16881 649 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 TBC1D25Q3MII6 688 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 SH2D4BQ5SQS7 431 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 UBAP2Q5T6F2 1119 aaKnown RBP5.53□□□□□ -1.52
LINC00397-202ENST00000606785 KYAT3Q6YP21 454 aaKnown RBP5.53□□□□□ -1.52
LINC00397-202ENST00000606785 USP51Q70EK9 711 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 WDR53Q7Z5U6 358 aaPredicted RBP5.53□□□□□ -1.52
LINC00397-202ENST00000606785 ARHGEF19Q8IW93 802 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 SFTPA1Q8IWL2 248 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 SCN4BQ8IWT1 228 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 LAS2Q8IYD9 372 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 TTC39CQ8N584 583 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 ADPRHL1Q8NDY3 354 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 ABHD11Q8NFV4 315 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 SLC25A43Q8WUT9 341 aaPredicted RBP5.53□□□□□ -1.52
LINC00397-202ENST00000606785 SAAL1Q96ER3 474 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 EDC3Q96F86 508 aaKnown RBP5.53□□□□□ -1.52
LINC00397-202ENST00000606785 TEPSINQ96N21 525 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 CLSTN3Q9BQT9 956 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 DEF6Q9H4E7 631 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 ZNF703Q9H7S9 590 aaPredicted RBP5.53□□□□□ -1.52
LINC00397-202ENST00000606785 ARHGEF3Q9NR81 526 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 PARPBPQ9NWS1 579 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 CEP72Q9P209 647 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 FZD4Q9ULV1 537 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 LYVE1Q9Y5Y7 322 aa5.53□□□□□ -1.52
LINC00397-202ENST00000606785 hCG_1807616A0A1W2PRN6 198 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 SYNDIG1LA6NDD5 238 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 MPPED1O15442 326 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 P4HA2O15460 535 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 TGFB1I1O43294 461 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 PEX1O43933 1283 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 NR2F6P10588 404 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 ITGAMP11215 1152 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 COX7A2P14406 83 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 TM4SF1P30408 202 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 AGTR2P50052 363 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 RPL7AP62424 266 aaKnown RBP5.52□□□□□ -1.53
LINC00397-202ENST00000606785 SLC25A3Q00325 362 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 B4GALNT1Q00973 533 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 MC1RQ01726 317 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 GXYLT1Q4G148 440 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 TIGD2Q4W5G0 525 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 PLAC9Q5JTB6 97 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 IKBIPQ70UQ0 350 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 ZNF551Q7Z340 670 aaPredicted RBP5.52□□□□□ -1.53
LINC00397-202ENST00000606785 GALNT7Q86SF2 657 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 GGNQ86UU5 652 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 CCDC105Q8IYK2 499 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 CNTROBQ8N137 903 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 RAB40AQ8WXH6 277 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 ASB10Q8WXI3 467 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 NCSTNQ92542 709 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 CNOT9Q92600 299 aaKnown RBP5.52□□□□□ -1.53
LINC00397-202ENST00000606785 TBC1D5Q92609 795 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 AKAP1Q92667 903 aaKnown RBP eCLIP5.52□□□□□ -1.53
LINC00397-202ENST00000606785 FAM120BQ96EK7 910 aaKnown RBP5.52□□□□□ -1.53
LINC00397-202ENST00000606785 LOXL4Q96JB6 756 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 LBHD1Q9BQE6 289 aaPredicted RBP5.52□□□□□ -1.53
LINC00397-202ENST00000606785 NPLQ9BXD5 320 aaPredicted RBP5.52□□□□□ -1.53
LINC00397-202ENST00000606785 HDHD5Q9BXW7 423 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 TRIM31Q9BZY9 425 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 EPHX3Q9H6B9 360 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 TTC12Q9H892 705 aaPredicted RBP5.52□□□□□ -1.53
LINC00397-202ENST00000606785 SFXN1Q9H9B4 322 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 PCDHB16Q9NRJ7 776 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 DUSP22Q9NRW4 184 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 HCFC1R1Q9NWW0 138 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 MPP6Q9NZW5 540 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 FZD1Q9UP38 647 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 B3GNT3Q9Y2A9 372 aa5.52□□□□□ -1.53
LINC00397-202ENST00000606785 A0A1W2PQM1 296 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 AGAP14A8MT82 685 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 SYN3O14994 580 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 PER2O15055 1255 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 VILLO15195 856 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 CCNT1O60563 726 aaKnown RBP5.51□□□□□ -1.53
LINC00397-202ENST00000606785 TSPAN9O75954 239 aa5.51□□□□□ -1.53
LINC00397-202ENST00000606785 SEC14L2O76054 403 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms