RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 TACR1P25103 407 aa9.36□□□□□ -0.91
CFDP1-206ENST00000566254 JAM2P57087 298 aa9.36□□□□□ -0.91
CFDP1-206ENST00000566254 SPAG1Q07617 926 aa9.36□□□□□ -0.91
CFDP1-206ENST00000566254 PLCL1Q15111 1095 aa9.36□□□□□ -0.91
CFDP1-206ENST00000566254 ARHGAP44Q17R89 818 aa9.36□□□□□ -0.91
CFDP1-206ENST00000566254 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
CFDP1-206ENST00000566254 ARL6IP4Q66PJ3 421 aaKnown RBP9.36□□□□□ -0.91
CFDP1-206ENST00000566254 SYT2Q8N9I0 419 aaPredicted RBP9.36□□□□□ -0.91
CFDP1-206ENST00000566254 MBNL3Q9NUK0 354 aaKnown RBP9.36□□□□□ -0.91
CFDP1-206ENST00000566254 AFF4Q9UHB7 1163 aaKnown RBP9.36□□□□□ -0.91
CFDP1-206ENST00000566254 APOBEC2Q9Y235 224 aaKnown RBP9.36□□□□□ -0.91
CFDP1-206ENST00000566254 DSPP15924 2871 aaKnown RBP9.36□□□□□ -0.91
CFDP1-206ENST00000566254 TRIP11Q15643 1979 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 SPAARA0A1B0GVQ0 90 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 LOC400499M0QZD8 3231 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 PSPNO60542 156 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 ATG13O75143 517 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 FKBP9O95302 570 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 BMP15O95972 392 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 EGFP01133 1207 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 CLTAP09496 248 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 CXCL8P10145 99 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 RPL9P32969 192 aaKnown RBP9.35□□□□□ -0.91
CFDP1-206ENST00000566254 LSSP48449 732 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 SLC12A3P55017 1021 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 IL2P60568 153 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 IRX4P78413 519 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 CEBPZQ03701 1054 aaKnown RBP9.35□□□□□ -0.91
CFDP1-206ENST00000566254 GRSF1Q12849 480 aaKnown RBP eCLIP9.35□□□□□ -0.91
CFDP1-206ENST00000566254 MAPK7Q13164 816 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 KARSQ15046 597 aaKnown RBP9.35□□□□□ -0.91
CFDP1-206ENST00000566254 ITPRIPL2Q3MIP1 535 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 TMEM196Q5HYL7 178 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 ZNF280DQ6N043 979 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 DSTYKQ6XUX3 929 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 ARHGAP36Q6ZRI8 547 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 FKBP9P1Q75LS8 142 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 GAREM2Q75VX8 874 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 USP37Q86T82 979 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 PROSER1Q86XN7 944 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 SPATS2Q86XZ4 545 aaKnown RBP9.35□□□□□ -0.91
CFDP1-206ENST00000566254 CAMKK1Q8N5S9 505 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 AGBL5Q8NDL9 886 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 TMEM161BQ8NDZ6 487 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 APPL2Q8NEU8 664 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 NBEAQ8NFP9 2946 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 PIP4K2CQ8TBX8 421 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 BPIFB1Q8TDL5 484 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 CHTF18Q8WVB6 975 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 CHFRQ96EP1 664 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 AK8Q96MA6 479 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 ZMAT2Q96NC0 199 aaKnown RBP9.35□□□□□ -0.91
CFDP1-206ENST00000566254 PGLYRP2Q96PD5 576 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 RPF1Q9H9Y2 349 aaKnown RBP9.35□□□□□ -0.91
CFDP1-206ENST00000566254 PTPRHQ9HD43 1115 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 THG1LQ9NWX6 298 aaKnown RBP9.35□□□□□ -0.91
CFDP1-206ENST00000566254 KCND2Q9NZV8 630 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 MYH11P35749 1972 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 EML5Q05BV3 1969 aa9.35□□□□□ -0.91
CFDP1-206ENST00000566254 GCN1Q92616 2671 aaKnown RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 OTOL1A6NHN0 477 aaPredicted RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 XPOTO43592 962 aaKnown RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 VNN2O95498 520 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 WNT11O96014 354 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 NTRK1P04629 796 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 RNASE1P07998 156 aaKnown RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 OR4Q2P0C623 313 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 KCNE1P15382 129 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 KRT15P19012 456 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 PDCP20941 246 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 TRHRP34981 398 aaPredicted RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 SIM1P81133 766 aaPredicted RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 COL28A1Q2UY09 1125 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 TMEM119Q4V9L6 283 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 HYIQ5T013 277 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 GPR158Q5T848 1215 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 NAIF1Q69YI7 327 aaPredicted RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 TRIM68Q6AZZ1 485 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 ALKAL1Q6UXT8 129 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 TP53INP2Q8IXH6 220 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 SH3RF2Q8TEC5 729 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 NOC3LQ8WTT2 800 aaKnown RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 BBC3Q96PG8 261 aaPredicted RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 REEP2Q9BRK0 252 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 NTPCRQ9BSD7 190 aaKnown RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 MSTO1Q9BUK6 570 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 PARVGQ9HBI0 331 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 FBRSL1Q9HCM7 1045 aaKnown RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 SLC6A20Q9NP91 592 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 CRTAC1Q9NQ79 661 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 TUBGCP4Q9UGJ1 667 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 ODF2LQ9ULJ1 636 aa9.34□□□□□ -0.91
CFDP1-206ENST00000566254 SMG1Q96Q15 3661 aaKnown RBP9.34□□□□□ -0.91
CFDP1-206ENST00000566254 ADAMTS20P59510 1910 aa9.33□□□□□ -0.92
CFDP1-206ENST00000566254 CITO14578 2027 aa9.33□□□□□ -0.92
CFDP1-206ENST00000566254 TRDMT1O14717 391 aaKnown RBP9.33□□□□□ -0.92
CFDP1-206ENST00000566254 SOAT2O75908 522 aa9.33□□□□□ -0.92
CFDP1-206ENST00000566254 APBB3O95704 486 aa9.33□□□□□ -0.92
CFDP1-206ENST00000566254 S100BP04271 92 aaPredicted RBP9.33□□□□□ -0.92
CFDP1-206ENST00000566254 BCKDHBP21953 392 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms